Tissue-regulated alternative exons identified by splicing microarrays are enriched for adjacent blocks of extreme intron sequence conservation

Supplementary data and visualization:

Updated links: (mm5 no longer supported by UCSC)
• Brain Specific
• Muscle Specific

• Paper (.doc format)
• intensityAlts.pdf
• Fig1DesignPlot.ai.pdf
• knownIseCountsLongerMotifs.pdf
• tgcttMotif.pdf
• uacuaacMotif.pdf
• Fig6Alig.pdf
• Fig6DownAlign.ai.pdf
• conservationFigure.pdf

• Brain Motifs.
• Muscle Motifs.

• Various Statistics for Brain affected exons.
• Various Statistics for Muscle affected exons.
• Probability of probe set expression as 1 - pval
• Probe set intensity estimates.

Data for particular alternative events. 5 matched matrices where each row is a particular event and the matrices contain data for the include, skip, and overall gene expression estimates.

• Include intensity estimates.
• Include expression probabilities (1-pval)
• Skip intensity estimates
• Skip expression probabilities (1-pval).
• Gene expression probabilities (1-pval).
• Design transcripts on mm2 mouse assembly.
• Design transcripts on mm5 mouse assembly.
• Probe Set Coordinates on mm2 mouse assembly.
• Probe Set Coordinates on mm5 mouse assembly.
• Mapping of probe sets to known genes (mm5).
• Mapping of probe sets to known gene names (mm5).

• Brain.
• Muscle.

• Set 1 Rt PCR results
• Set 2 RT PCR results