fitVsDatCorrelation=0.779858351286212 cont.fitVsDatCorrelation=0.275112437045777 fstatistic=11234.0381345878,59,853 cont.fstatistic=4753.8358148929,59,853 residuals=-0.461734362653377,-0.088784229548452,-0.0063731016079968,0.077202480803332,0.762884492084852 cont.residuals=-0.475502345514084,-0.151911825938973,-0.0414188913340944,0.115461399807204,1.15978234667675 predictedValues: Include Exclude Both Lung 66.2936303184018 51.7124279618186 57.8302691727344 cerebhem 64.2539620702097 48.7702918000105 56.7576266084224 cortex 52.0535889067106 51.9200191429472 50.8780200381549 heart 53.9061498060377 57.758841331502 54.0286382633882 kidney 54.8945267652998 51.4430507918736 53.4339113137962 liver 56.9710740581888 53.5705876487208 59.648013093887 stomach 54.2989002916168 52.2222252698047 55.1009225519069 testicle 55.0009273553157 49.8223675823621 55.6301925468939 diffExp=14.5812023565832,15.4836702701992,0.13356976376339,-3.85269152546425,3.4514759734262,3.40048640946801,2.07667502181208,5.17855977295365 diffExpScore=1.16175889454267 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,1,0,0,0,0,0,0 diffExp1.3Score=0.5 diffExp1.2=1,1,0,0,0,0,0,0 diffExp1.2Score=0.666666666666667 cont.predictedValues: Include Exclude Both Lung 55.0987671895904 55.9020704067367 55.4923968526819 cerebhem 56.8370789328202 63.1664184198632 59.9457370872495 cortex 57.0140409997479 59.3704350928298 55.2080812010219 heart 55.4542392889393 52.4530001658242 53.0888270700858 kidney 58.5989798750557 56.5396193479503 54.4407755799418 liver 53.6995404782704 53.45081458233 53.7449078081006 stomach 54.7730212721937 64.9847560278402 57.7336538334317 testicle 54.5270553504291 54.495277064247 54.7361225751242 cont.diffExp=-0.8033032171463,-6.32933948704304,-2.35639409308191,3.00123912311513,2.05936052710537,0.248725895940368,-10.2117347556466,0.0317782861820817 cont.diffExpScore=1.63036569806235 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=-0.39655061049497 cont.tran.correlation=0.25289476683771 tran.covariance=-0.00179051991521957 cont.tran.covariance=0.000610161494471009 tran.mean=54.6807856938013 cont.tran.mean=56.6478196559168 weightedLogRatios: wLogRatio Lung 1.01094458005867 cerebhem 1.10977633185894 cortex 0.0101512870414242 heart -0.277629633366952 kidney 0.257996115878871 liver 0.246898432366987 stomach 0.155008536145936 testicle 0.391381653466682 cont.weightedLogRatios: wLogRatio Lung -0.0581331604966965 cerebhem -0.432152861011842 cortex -0.164568800253444 heart 0.221880244714138 kidney 0.144992682429781 liver 0.0184824446722667 stomach -0.698979310322311 testicle 0.00233094405078204 varWeightedLogRatios=0.225855276036771 cont.varWeightedLogRatios=0.0942444400816712 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.20601479573429 0.069454115519909 60.5581795153469 0 *** df.mm.trans1 -0.0297878519899736 0.0599788752581494 -0.49663905603042 0.61957156750051 df.mm.trans2 -0.254257900790251 0.0529910651908942 -4.79812775746847 1.89018296821143e-06 *** df.mm.exp2 -0.0711049266519732 0.0681634532065408 -1.04315323398478 0.297172872265683 df.mm.exp3 -0.109732449983420 0.0681634532065408 -1.60984288238628 0.107802142861263 df.mm.exp4 -0.0282728728402703 0.0681634532065408 -0.414780524023646 0.678406872608482 df.mm.exp5 -0.114836183843449 0.0681634532065408 -1.68471781345182 0.0924088273550657 . df.mm.exp6 -0.147196623622322 0.0681634532065408 -2.15946547156736 0.0310921690302114 * df.mm.exp7 -0.141433940214570 0.0681634532065408 -2.07492334324692 0.0382929332330376 * df.mm.exp8 -0.185191638728595 0.0681634532065408 -2.71687583326286 0.0067236210755511 ** df.mm.trans1:exp2 0.0398544960408947 0.0630048972566869 0.632561876555791 0.527189311258683 df.mm.trans2:exp2 0.0125281408076865 0.0465322004539516 0.269235941680523 0.787813233736527 df.mm.trans1:exp3 -0.132087625142565 0.0630048972566869 -2.09646600333986 0.0363349050042764 * df.mm.trans2:exp3 0.113738752345071 0.0465322004539516 2.44430203677187 0.0147147901277965 * df.mm.trans1:exp4 -0.178576378113842 0.0630048972566869 -2.8343253602384 0.0047007179415156 ** df.mm.trans2:exp4 0.138851168438513 0.0465322004539516 2.98398027782762 0.00292639699748236 ** df.mm.trans1:exp5 -0.0738439861795528 0.0630048972566869 -1.17203565746178 0.241509980842670 df.mm.trans2:exp5 0.109613431052820 0.0465322004539516 2.35564684204638 0.0187159707566792 * df.mm.trans1:exp6 -0.00435352896182875 0.0630048972566869 -0.0690982630142563 0.944927598084508 df.mm.trans2:exp6 0.18249866445539 0.0465322004539516 3.92198655286013 9.4876777223563e-05 *** df.mm.trans1:exp7 -0.0581559044545512 0.0630048972566869 -0.923037842877824 0.356248497371652 df.mm.trans2:exp7 0.151243977205467 0.0465322004539516 3.25030786702509 0.00119797254276087 ** df.mm.trans1:exp8 -0.00155213412285488 0.0630048972566869 -0.0246351345758309 0.980351756201927 df.mm.trans2:exp8 0.147957531427577 0.0465322004539516 3.17968052196449 0.0015275903069925 ** df.mm.trans1:probe2 -0.0562866878384848 0.0431365043259785 -1.30485046755601 0.192295673612255 df.mm.trans1:probe3 -0.219724716340064 0.0431365043259785 -5.09370705330281 4.32378299313183e-07 *** df.mm.trans1:probe4 -0.137742290570554 0.0431365043259785 -3.1931722962447 0.00145878902973557 ** df.mm.trans1:probe5 -0.203264408518914 0.0431365043259785 -4.71212055067939 2.86159850646396e-06 *** df.mm.trans1:probe6 -0.195108376282358 0.0431365043259785 -4.52304560443615 6.958377577618e-06 *** df.mm.trans1:probe7 0.188315460903386 0.0431365043259785 4.36557073517836 1.42348505331518e-05 *** df.mm.trans1:probe8 0.0163796686406339 0.0431365043259785 0.379717107275414 0.70424993615057 df.mm.trans1:probe9 -0.129327342488189 0.0431365043259785 -2.99809510550217 0.00279556864440238 ** df.mm.trans1:probe10 -0.0896619558157826 0.0431365043259785 -2.07856332395912 0.0379559169679781 * df.mm.trans1:probe11 0.0286660078969573 0.0431365043259785 0.664541745903446 0.506523242771729 df.mm.trans1:probe12 -0.0664585850228151 0.0431365043259785 -1.54065764162515 0.123770998298459 df.mm.trans1:probe13 0.406161267119644 0.0431365043259785 9.41572047772629 4.26010017112586e-20 *** df.mm.trans1:probe14 0.219727350571804 0.0431365043259785 5.09376812064661 4.32243102345105e-07 *** df.mm.trans1:probe15 -0.035096324513171 0.0431365043259785 -0.813610770310718 0.41609501351316 df.mm.trans1:probe16 0.256876896900364 0.0431365043259785 5.95497713396453 3.798897160088e-09 *** df.mm.trans1:probe17 0.0922736102936273 0.0431365043259785 2.13910727666582 0.0327103075562096 * df.mm.trans1:probe18 0.00599956053177199 0.0431365043259785 0.139083141425505 0.889417279204038 df.mm.trans1:probe19 -0.0131353304340420 0.0431365043259785 -0.304506140200411 0.760816589099334 df.mm.trans1:probe20 0.257524022317093 0.0431365043259785 5.96997893874312 3.47832567249098e-09 *** df.mm.trans1:probe21 0.0638316998908027 0.0431365043259785 1.47976060851924 0.139306359333749 df.mm.trans1:probe22 0.181790479260760 0.0431365043259785 4.21430716515615 2.77252986774105e-05 *** df.mm.trans2:probe2 -0.00638407229243165 0.0431365043259785 -0.147996978248117 0.88238012919588 df.mm.trans2:probe3 0.0874536982680997 0.0431365043259785 2.02737100825835 0.0429349791819342 * df.mm.trans2:probe4 -0.0407716641197435 0.0431365043259785 -0.945177750418436 0.344835784997287 df.mm.trans2:probe5 -0.0399498736143465 0.0431365043259785 -0.926126820858017 0.354642021712633 df.mm.trans2:probe6 -0.09728818758697 0.0431365043259785 -2.25535631843907 0.0243636798871749 * df.mm.trans3:probe2 0.444105156511169 0.0431365043259785 10.2953441279133 1.64388976948431e-23 *** df.mm.trans3:probe3 0.432814639436521 0.0431365043259785 10.0336048597212 1.80391154449482e-22 *** df.mm.trans3:probe4 -0.070127116028527 0.0431365043259785 -1.62570234014752 0.104382363357275 df.mm.trans3:probe5 0.0125381728423557 0.0431365043259785 0.290662700612130 0.771379954005266 df.mm.trans3:probe6 -0.122884932585733 0.0431365043259785 -2.84874573185401 0.00449479786663830 ** df.mm.trans3:probe7 0.219809003135828 0.0431365043259785 5.09566100847561 4.28072639780022e-07 *** df.mm.trans3:probe8 -0.0279229280002852 0.0431365043259785 -0.647315503112498 0.517601932505353 df.mm.trans3:probe9 0.258870070650673 0.0431365043259785 6.00118332942364 2.89376040123812e-09 *** df.mm.trans3:probe10 0.208230771608954 0.0431365043259785 4.82725188011003 1.64009981137982e-06 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.98211619749788 0.106675263058616 37.3293309369182 1.49189074584914e-181 *** df.mm.trans1 0.023236433814177 0.0921221478126654 0.252235041907939 0.800920157332673 df.mm.trans2 0.0442962180152189 0.0813895012078086 0.544249778630774 0.586411834454393 df.mm.exp2 0.0760392042411435 0.104692922044441 0.726307020152385 0.467849822647968 df.mm.exp3 0.0995018651492457 0.104692922044441 0.950416352950859 0.342169941135885 df.mm.exp4 -0.0129735373760302 0.104692922044440 -0.123919909031893 0.901407883183121 df.mm.exp5 0.0920627424758099 0.104692922044441 0.87935975687765 0.379453897773226 df.mm.exp6 -0.0385653436475732 0.104692922044440 -0.368366293484509 0.712691524829199 df.mm.exp7 0.105027479793044 0.104692922044441 1.0031956099999 0.316050982410489 df.mm.exp8 -0.0221955634345665 0.104692922044440 -0.212006341986947 0.83215273294407 df.mm.trans1:exp2 -0.0449776352349569 0.0967698449332575 -0.464789783077343 0.642200621541069 df.mm.trans2:exp2 0.0461321844141822 0.071469266968041 0.645482825993041 0.518787929349005 df.mm.trans1:exp3 -0.0653316361748034 0.0967698449332575 -0.675123910964856 0.499779999004385 df.mm.trans2:exp3 -0.0393069055599121 0.071469266968041 -0.549983331681421 0.582474781019832 df.mm.trans1:exp4 0.0194043588567024 0.0967698449332575 0.200520718722714 0.841121154304357 df.mm.trans2:exp4 -0.050710346087964 0.071469266968041 -0.709540593310412 0.478182969720872 df.mm.trans1:exp5 -0.0304727961738145 0.0967698449332575 -0.314899710698428 0.752914814151483 df.mm.trans2:exp5 -0.0807225398338933 0.071469266968041 -1.12947205503017 0.259016271544987 df.mm.trans1:exp6 0.0128424460701647 0.0967698449332575 0.132711239529445 0.894453052755887 df.mm.trans2:exp6 -0.0062741960792639 0.071469266968041 -0.0877887285743332 0.930065201176064 df.mm.trans1:exp7 -0.110957061469845 0.0967698449332575 -1.14660782546849 0.251865270207985 df.mm.trans2:exp7 0.0455238227864713 0.071469266968041 0.636970612932524 0.524314892332328 df.mm.trans1:exp8 0.0117652285182229 0.0967698449332575 0.121579491279927 0.903260691077362 df.mm.trans2:exp8 -0.00329181518576320 0.071469266968041 -0.0460591709613477 0.963273868904539 df.mm.trans1:probe2 0.0604614651515774 0.0662537836952777 0.91257376981908 0.361724597478247 df.mm.trans1:probe3 0.0218286707576325 0.0662537836952777 0.329470553078591 0.741880931810188 df.mm.trans1:probe4 -0.0152176258278885 0.0662537836952777 -0.229686894530872 0.818390143978349 df.mm.trans1:probe5 0.00775972932967096 0.0662537836952777 0.117121300805407 0.906791500556209 df.mm.trans1:probe6 -0.0665065861102075 0.0662537836952777 -1.00381566758651 0.315752137967100 df.mm.trans1:probe7 0.0109641009665643 0.0662537836952777 0.165486412323132 0.868600355437474 df.mm.trans1:probe8 -0.0778112495064726 0.0662537836952777 -1.17444235131312 0.240545655695819 df.mm.trans1:probe9 0.0958693934267756 0.0662537836952777 1.44700254203910 0.148263590644755 df.mm.trans1:probe10 0.00441631344914874 0.0662537836952777 0.0666575281113117 0.94686996657905 df.mm.trans1:probe11 0.0416871140792396 0.0662537836952777 0.629203522488195 0.529384291294552 df.mm.trans1:probe12 0.0548375293707848 0.0662537836952777 0.827689021098027 0.408078135125838 df.mm.trans1:probe13 0.0385086252165599 0.0662537836952777 0.581229072043242 0.561239621191476 df.mm.trans1:probe14 -0.0309299227428692 0.0662537836952777 -0.466840096033244 0.640733499457949 df.mm.trans1:probe15 -0.037146832557353 0.0662537836952777 -0.560674885048123 0.575166425985442 df.mm.trans1:probe16 0.00609264134689282 0.0662537836952777 0.091959145683133 0.926752090519004 df.mm.trans1:probe17 -0.0514326904813375 0.0662537836952777 -0.776298161594708 0.437788151874626 df.mm.trans1:probe18 -0.0742907662189351 0.0662537836952777 -1.12130601567787 0.262473191136582 df.mm.trans1:probe19 0.00573267416492758 0.0662537836952777 0.0865259890860571 0.931068603367702 df.mm.trans1:probe20 0.0330340196601169 0.0662537836952777 0.498598235718143 0.61819098987029 df.mm.trans1:probe21 0.0136588824792605 0.0662537836952777 0.206160036717028 0.83671509795091 df.mm.trans1:probe22 0.0792752513862996 0.0662537836952777 1.19653923088999 0.231818659951611 df.mm.trans2:probe2 -0.0109648725800579 0.0662537836952777 -0.165498058654112 0.86859119222249 df.mm.trans2:probe3 0.0559959961807781 0.0662537836952777 0.845174313942908 0.398250519311647 df.mm.trans2:probe4 -0.056347547248746 0.0662537836952777 -0.8504804421119 0.395296690596715 df.mm.trans2:probe5 -0.000584028581499828 0.0662537836952777 -0.00881502231157034 0.992968782022465 df.mm.trans2:probe6 -0.0330755213756891 0.0662537836952777 -0.499224640932418 0.617749864561805 df.mm.trans3:probe2 0.0533122770416076 0.0662537836952777 0.804667659236004 0.421235700633641 df.mm.trans3:probe3 -0.0864056771802638 0.0662537836952777 -1.30416215287675 0.192530100660583 df.mm.trans3:probe4 0.0214357393740065 0.0662537836952777 0.323539852042207 0.74636573539528 df.mm.trans3:probe5 -0.124629173029148 0.0662537836952777 -1.88108763119640 0.0603004013386178 . df.mm.trans3:probe6 -0.0775060580012749 0.0662537836952777 -1.16983595016626 0.242393751177322 df.mm.trans3:probe7 0.0178933660264332 0.0662537836952777 0.270073119276183 0.787169326989838 df.mm.trans3:probe8 -0.0704809616600712 0.0662537836952777 -1.06380281591517 0.287719086997064 df.mm.trans3:probe9 -0.0818428402141301 0.0662537836952777 -1.23529307534422 0.217061570859826 df.mm.trans3:probe10 0.0141950115953851 0.0662537836952777 0.214252089520992 0.830401682687606