fitVsDatCorrelation=0.883515334602875 cont.fitVsDatCorrelation=0.283120230789985 fstatistic=13513.3294847326,63,945 cont.fstatistic=3211.77298192427,63,945 residuals=-0.687921968661447,-0.0857606688520542,-0.00514188433550733,0.0733075377337947,0.762263021440608 cont.residuals=-0.508778479080323,-0.197743397598595,-0.0568189338719776,0.134974202665613,1.3315571965504 predictedValues: Include Exclude Both Lung 53.1072246573046 42.6669065334442 65.7343692577723 cerebhem 59.688997136636 47.2584466060489 58.1196133790858 cortex 53.8937817953033 44.1615548468452 65.311401703773 heart 54.2734352942486 44.7514983926796 59.87221441111 kidney 54.0980645464776 43.4896641607418 62.4687147791209 liver 59.8199667708633 46.2903223647245 60.1127582260029 stomach 55.7325050596586 44.4332420303156 61.1860264423523 testicle 55.7038291382638 45.3506506692308 62.3685944866422 diffExp=10.4403181238604,12.4305505305871,9.73222694845815,9.521936901569,10.6084003857357,13.5296444061388,11.299263029343,10.3531784690330 diffExpScore=0.98875336933805 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,0 diffExp1.3Score=0 diffExp1.2=1,1,1,1,1,1,1,1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 60.2159096267489 60.9257616436631 57.5100439893542 cerebhem 59.0793624414218 57.8393920137926 57.2224674688273 cortex 53.9972100419845 54.4241833489353 58.6576361253775 heart 56.4028667107209 62.6915771600198 56.6402120997714 kidney 55.4975453015941 53.0092619361258 53.9468462124796 liver 54.3520834555662 55.4663338960419 57.6529683138444 stomach 53.8423425089079 57.6670795774642 63.5551270255477 testicle 56.2100148184509 60.2930032130984 56.3232958193104 cont.diffExp=-0.709852016914212,1.23997042762920,-0.426973306950764,-6.28871044929888,2.48828336546828,-1.11425044047574,-3.82473706855633,-4.08298839464753 cont.diffExpScore=1.47061638762869 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.918017164980519 cont.tran.correlation=0.523553968711518 tran.covariance=0.00138884473745594 cont.tran.covariance=0.00127575407495548 tran.mean=50.2950056251742 cont.tran.mean=56.9946204809085 weightedLogRatios: wLogRatio Lung 0.845540842226774 cerebhem 0.927617705180122 cortex 0.774223450400367 heart 0.75188197746442 kidney 0.847269932581217 liver 1.01617419600251 stomach 0.885293601047745 testicle 0.805479314945215 cont.weightedLogRatios: wLogRatio Lung -0.0480944571185059 cerebhem 0.086294639886541 cortex -0.0314487367783704 heart -0.431853061813323 kidney 0.183185925428576 liver -0.0812874163897106 stomach -0.275903237709821 testicle -0.284983149537311 varWeightedLogRatios=0.00741502042619247 cont.varWeightedLogRatios=0.0424352674251959 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 2.95804150531946 0.0633640297166618 46.6832920593374 1.29133309232666e-247 *** df.mm.trans1 0.97587885966977 0.0540455468334402 18.0566007163786 7.66300033215276e-63 *** df.mm.trans2 0.791636301699897 0.0475296833040386 16.6556191135536 8.24545429881563e-55 *** df.mm.exp2 0.342161255584509 0.0601657388541838 5.68697837175677 1.72321582259919e-08 *** df.mm.exp3 0.0555884296184981 0.0601657388541838 0.923921665006405 0.355762951577396 df.mm.exp4 0.162832621877102 0.0601657388541838 2.70640110099436 0.00692426855272713 ** df.mm.exp5 0.0885411854019878 0.0601657388541838 1.47162134278071 0.141456081065120 df.mm.exp6 0.289935653646788 0.0601657388541838 4.81894944146649 1.68059607554045e-06 *** df.mm.exp7 0.160517936035847 0.0601657388541838 2.66792927491299 0.00776266766303655 ** df.mm.exp8 0.161296898497073 0.0601657388541838 2.68087621907192 0.00747086368442238 ** df.mm.trans1:exp2 -0.225326531309927 0.0545121357504204 -4.13351134032919 3.88993848718837e-05 *** df.mm.trans2:exp2 -0.239953450585285 0.0381938761131227 -6.28251109875809 5.07670914697664e-10 *** df.mm.trans1:exp3 -0.0408863005067119 0.0545121357504204 -0.750040334025926 0.453417102227087 df.mm.trans2:exp3 -0.0211574159886593 0.0381938761131227 -0.553947861327172 0.579745578739907 df.mm.trans1:exp4 -0.141110712314549 0.0545121357504204 -2.58861096473295 0.00978441633348682 ** df.mm.trans2:exp4 -0.115131291194807 0.0381938761131227 -3.01439138708548 0.00264371487588587 ** df.mm.trans1:exp5 -0.0700557522397723 0.0545121357504204 -1.28514047881956 0.199058078969383 df.mm.trans2:exp5 -0.0694414781534997 0.0381938761131227 -1.81813120898826 0.06936057067816 . df.mm.trans1:exp6 -0.170909132499799 0.0545121357504204 -3.13524924582470 0.00177011674348068 ** df.mm.trans2:exp6 -0.208426331716004 0.0381938761131227 -5.45706152207979 6.18530085161532e-08 *** df.mm.trans1:exp7 -0.112267362102805 0.0545121357504204 -2.05949300201357 0.0397205107777678 * df.mm.trans2:exp7 -0.119953649466315 0.0381938761131227 -3.14065137329962 0.00173812661809195 ** df.mm.trans1:exp8 -0.113560984746173 0.0545121357504204 -2.08322391304026 0.0374991349117956 * df.mm.trans2:exp8 -0.100295971429318 0.0381938761131227 -2.62596996262598 0.00877995356126113 ** df.mm.trans1:probe2 0.460644930891085 0.0402598803959222 11.4417858761881 1.75711087923848e-28 *** df.mm.trans1:probe3 -0.0937041186113799 0.0402598803959222 -2.32748129626513 0.0201500762752391 * df.mm.trans1:probe4 0.507038529672841 0.0402598803959222 12.5941389961058 9.84848761440289e-34 *** df.mm.trans1:probe5 0.224493534290603 0.0402598803959222 5.57611031336648 3.20991436164798e-08 *** df.mm.trans1:probe6 -0.0294443215592313 0.0402598803959222 -0.731356409151519 0.464742790369394 df.mm.trans1:probe7 0.359674011183341 0.0402598803959222 8.9338072454823 2.11390867144518e-18 *** df.mm.trans1:probe8 0.881654100049452 0.0402598803959222 21.8990740006955 2.66466958550046e-86 *** df.mm.trans1:probe9 -0.0666020331068228 0.0402598803959222 -1.65430280596583 0.0983980838225161 . df.mm.trans1:probe10 0.0822811513785018 0.0402598803959222 2.04375051712364 0.0412550271770609 * df.mm.trans1:probe11 -0.082756104879754 0.0402598803959222 -2.05554770818783 0.040100454085512 * df.mm.trans1:probe12 -0.0317343125056442 0.0402598803959222 -0.7882366314446 0.430755984726611 df.mm.trans1:probe13 -0.0775829130303557 0.0402598803959222 -1.92705274500055 0.0542725927847616 . df.mm.trans1:probe14 -0.094540006120744 0.0402598803959222 -2.34824359116376 0.0190674921856681 * df.mm.trans1:probe15 -0.161324932664919 0.0402598803959222 -4.00708921830923 6.63052501777558e-05 *** df.mm.trans1:probe16 -0.0212819250564634 0.0402598803959222 -0.528613717854438 0.597197565416823 df.mm.trans1:probe17 -0.215333113252278 0.0402598803959222 -5.34857806666729 1.11230813013511e-07 *** df.mm.trans1:probe18 -0.141191172513471 0.0402598803959222 -3.50699433592386 0.000474524313724211 *** df.mm.trans1:probe19 0.0613965290766936 0.0402598803959222 1.52500525269599 0.127592370141374 df.mm.trans1:probe20 -0.179553816360396 0.0402598803959222 -4.45986959212581 9.18614045031888e-06 *** df.mm.trans2:probe2 -0.0189089004828388 0.0402598803959222 -0.469671054580531 0.638698404313392 df.mm.trans2:probe3 0.0603457140488732 0.0402598803959222 1.49890445414700 0.134232390109127 df.mm.trans2:probe4 0.0203482861271027 0.0402598803959222 0.505423412265371 0.613379337049175 df.mm.trans2:probe5 0.0071840777896814 0.0402598803959222 0.17844260139454 0.85841364112506 df.mm.trans2:probe6 0.0134382045840618 0.0402598803959222 0.333786500404579 0.738614722898478 df.mm.trans3:probe2 -0.511738841347795 0.0402598803959222 -12.7108882668123 2.76311246458957e-34 *** df.mm.trans3:probe3 -0.582640770689692 0.0402598803959222 -14.4719945752423 5.05852811681112e-43 *** df.mm.trans3:probe4 -0.391135359252901 0.0402598803959222 -9.71526381614681 2.48290092835450e-21 *** df.mm.trans3:probe5 -0.494610493980548 0.0402598803959222 -12.2854437001916 2.72606207629154e-32 *** df.mm.trans3:probe6 -0.20875449227058 0.0402598803959222 -5.18517417880168 2.63991561740688e-07 *** df.mm.trans3:probe7 -0.726787312832323 0.0402598803959222 -18.0523962238581 8.10934154953385e-63 *** df.mm.trans3:probe8 -0.691023020663299 0.0402598803959222 -17.1640604459742 1.09606928424081e-57 *** df.mm.trans3:probe9 -0.408635672641125 0.0402598803959222 -10.1499475066129 4.79013225357314e-23 *** df.mm.trans3:probe10 -0.616072319301436 0.0402598803959222 -15.3023882148402 2.16859890714656e-47 *** df.mm.trans3:probe11 -0.80370996618867 0.0402598803959222 -19.9630490275891 2.9688722441882e-74 *** df.mm.trans3:probe12 -0.691364315822133 0.0402598803959222 -17.1725377478309 9.80609239648654e-58 *** df.mm.trans3:probe13 -0.393801552502214 0.0402598803959222 -9.78148838569578 1.37272525919331e-21 *** df.mm.trans3:probe14 -0.804523895966574 0.0402598803959222 -19.9832659226693 2.23343664889732e-74 *** df.mm.trans3:probe15 -0.679620857542494 0.0402598803959222 -16.8808464123339 4.44318749842804e-56 *** df.mm.trans3:probe16 -0.63453719001105 0.0402598803959222 -15.7610301811855 7.27091067746042e-50 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.12928914264628 0.129742024095327 31.826920933593 1.17966948833002e-151 *** df.mm.trans1 -0.0339423841018434 0.110661816662608 -0.306721732260448 0.759122756125197 df.mm.trans2 -0.0252895081797313 0.0973201569415698 -0.259858892283896 0.795029224572951 df.mm.exp2 -0.0660279637982705 0.123193312910148 -0.535970356170455 0.592105164070703 df.mm.exp3 -0.241609870618485 0.123193312910148 -1.96122553173567 0.0501460358848195 . df.mm.exp4 -0.0216051926659718 0.123193312910148 -0.175376342721863 0.860821497984185 df.mm.exp5 -0.156826876678866 0.123193312910148 -1.27301452468649 0.203325966186014 df.mm.exp6 -0.198815633862908 0.123193312910148 -1.61385085899845 0.106893620543132 df.mm.exp7 -0.26679409926358 0.123193312910148 -2.16565406807566 0.0305871792208446 * df.mm.exp8 -0.0584303120194427 0.123193312910148 -0.474297757233456 0.635397163236435 df.mm.trans1:exp2 0.0469730330448963 0.111617188200374 0.420840497796545 0.673967245040878 df.mm.trans2:exp2 0.0140419293101160 0.0782044768478426 0.179554034194699 0.857541184935342 df.mm.trans1:exp3 0.132605653045658 0.111617188200374 1.18803972025890 0.235116259462723 df.mm.trans2:exp3 0.128762371788822 0.0782044768478426 1.64648338533543 0.0999967667593968 . df.mm.trans1:exp4 -0.0438114188306491 0.111617188200374 -0.392514983910893 0.694766256951896 df.mm.trans2:exp4 0.0501761949498354 0.0782044768478426 0.641602590698996 0.521286836668031 df.mm.trans1:exp5 0.0752290707398297 0.111617188200374 0.673991810336406 0.500481343926809 df.mm.trans2:exp5 0.0176374277098707 0.0782044768478426 0.225529642557250 0.821616031229656 df.mm.trans1:exp6 0.0963619838312529 0.111617188200374 0.863325670400015 0.388177488119083 df.mm.trans2:exp6 0.104935773328202 0.0782044768478426 1.34181286747009 0.179978998821606 df.mm.trans1:exp7 0.154917695449663 0.111617188200374 1.38793762813265 0.165483175138092 df.mm.trans2:exp7 0.211824464605153 0.0782044768478426 2.70859768063261 0.00687895505226295 ** df.mm.trans1:exp8 -0.0104113442532112 0.111617188200374 -0.0932772489710172 0.925703077437601 df.mm.trans2:exp8 0.0479902753046539 0.0782044768478426 0.613651254237344 0.539593484966177 df.mm.trans1:probe2 0.0487108794688247 0.0824347566870292 0.590902204682423 0.554727245091247 df.mm.trans1:probe3 -0.0407499986217357 0.0824347566870292 -0.49433030749938 0.621187813435688 df.mm.trans1:probe4 0.0521470921084584 0.0824347566870292 0.632586231878374 0.527156908541435 df.mm.trans1:probe5 2.13524216424439e-05 0.0824347566870292 0.000259022073947647 0.999793384906931 df.mm.trans1:probe6 0.0804245959241558 0.0824347566870292 0.975615130757222 0.329504894797075 df.mm.trans1:probe7 0.115122560811395 0.0824347566870293 1.39652939413005 0.162883042972588 df.mm.trans1:probe8 -0.0434981296423455 0.0824347566870292 -0.527667350405241 0.597854104216913 df.mm.trans1:probe9 0.0431342571336214 0.0824347566870292 0.523253283774275 0.600920674412076 df.mm.trans1:probe10 -0.0297016902615693 0.0824347566870292 -0.360305427652736 0.71869925541402 df.mm.trans1:probe11 0.00504468340370478 0.0824347566870293 0.0611960731910371 0.951215996716122 df.mm.trans1:probe12 0.087650001769507 0.0824347566870292 1.06326512374238 0.287933359682631 df.mm.trans1:probe13 -0.0639966416838099 0.0824347566870292 -0.776330813066857 0.437747941578398 df.mm.trans1:probe14 -0.0204848877163579 0.0824347566870292 -0.248498188623648 0.803802962850212 df.mm.trans1:probe15 -0.0195985939881746 0.0824347566870293 -0.237746731789145 0.812129071617335 df.mm.trans1:probe16 0.051394613287329 0.0824347566870293 0.623458057654651 0.533134001313586 df.mm.trans1:probe17 -0.135028933320502 0.0824347566870293 -1.63800972729441 0.101752559130735 df.mm.trans1:probe18 0.0287800901696432 0.0824347566870292 0.349125676186676 0.727072737664562 df.mm.trans1:probe19 -0.046268806183647 0.0824347566870293 -0.561277888637563 0.574741182263171 df.mm.trans1:probe20 -0.0198682638047445 0.0824347566870293 -0.241018043883796 0.80959341298377 df.mm.trans2:probe2 -0.00215386558989026 0.0824347566870292 -0.0261281245490613 0.979160660859652 df.mm.trans2:probe3 0.0734668695213512 0.0824347566870292 0.891212305026563 0.373042133811742 df.mm.trans2:probe4 0.169519442631705 0.0824347566870292 2.05640738742397 0.0400174024058638 * df.mm.trans2:probe5 -0.0871419351395198 0.0824347566870292 -1.05710186627179 0.290735251473464 df.mm.trans2:probe6 -0.0292482528509159 0.0824347566870292 -0.354804866616631 0.722814947203217 df.mm.trans3:probe2 0.0441500487368792 0.0824347566870292 0.535575654144267 0.592377876751554 df.mm.trans3:probe3 -0.0827055221520912 0.0824347566870292 -1.00328460319341 0.315980387962111 df.mm.trans3:probe4 -0.0974921761017117 0.0824347566870292 -1.18265862628611 0.237241933275026 df.mm.trans3:probe5 -0.0663489371696837 0.0824347566870292 -0.804866052089936 0.421099427459423 df.mm.trans3:probe6 -0.0229995352527701 0.0824347566870292 -0.279002888794709 0.780303652529438 df.mm.trans3:probe7 0.0475967760507255 0.0824347566870292 0.577387232808011 0.563815427610636 df.mm.trans3:probe8 -0.181406531974683 0.0824347566870292 -2.20060735623214 0.0280051099961979 * df.mm.trans3:probe9 0.0545824323961617 0.0824347566870292 0.662128871240424 0.508050066610216 df.mm.trans3:probe10 -0.128456435879527 0.0824347566870293 -1.55828003917357 0.119501693164213 df.mm.trans3:probe11 -0.0061870601655834 0.0824347566870292 -0.075054023499737 0.940187613292813 df.mm.trans3:probe12 0.0447384138383308 0.0824347566870292 0.54271299675432 0.58745539222304 df.mm.trans3:probe13 0.000518760497395853 0.0824347566870292 0.00629298269618691 0.994980287583532 df.mm.trans3:probe14 0.0394045243111608 0.0824347566870292 0.478008620329451 0.632754622469498 df.mm.trans3:probe15 0.088171698963692 0.0824347566870292 1.06959373093613 0.285075339418354 df.mm.trans3:probe16 -0.0231286919401201 0.0824347566870293 -0.280569663448273 0.779101897307895