fitVsDatCorrelation=0.955667190888602 cont.fitVsDatCorrelation=0.24962264308019 fstatistic=8742.43231427562,57,807 cont.fstatistic=795.490800584338,57,807 residuals=-1.09082640509516,-0.106319034909541,0.00386753563496389,0.110495257663033,1.07794665152225 cont.residuals=-1.34310937769095,-0.537370264670887,-0.00167008499684248,0.482001228670117,1.852247950417 predictedValues: Include Exclude Both Lung 89.1484513056624 222.730133204857 170.201564037675 cerebhem 112.007504643421 389.500656394822 291.606941074703 cortex 105.418940172172 325.156006545209 225.643857210724 heart 81.6668901575729 300.306154732700 183.926359356322 kidney 75.2088569718617 95.4931711753957 102.469265991588 liver 77.7361008543166 134.630917327437 115.749917275521 stomach 81.081942918423 205.791523182370 145.143998260992 testicle 82.9498220289613 259.141567627116 176.407372284621 diffExp=-133.581681899195,-277.493151751402,-219.737066373037,-218.639264575127,-20.284314203534,-56.8948164731202,-124.709580263947,-176.191745598154 diffExpScore=0.99918602013754 diffExp1.5=-1,-1,-1,-1,0,-1,-1,-1 diffExp1.5Score=0.875 diffExp1.4=-1,-1,-1,-1,0,-1,-1,-1 diffExp1.4Score=0.875 diffExp1.3=-1,-1,-1,-1,0,-1,-1,-1 diffExp1.3Score=0.875 diffExp1.2=-1,-1,-1,-1,-1,-1,-1,-1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 154.838742779514 108.338129479369 149.125495940198 cerebhem 136.889482370203 121.070400302803 143.547624291741 cortex 130.381918918166 174.053216085723 161.945846810153 heart 149.701582048611 130.073416796245 162.731062438147 kidney 132.738067988633 92.8273613789198 148.314475934406 liver 127.511527568199 126.101130616563 171.458507474028 stomach 139.791286559540 118.54470667576 126.499542288945 testicle 140.755593840183 97.657148261375 125.113694063679 cont.diffExp=46.5006133001458,15.8190820673997,-43.6712971675565,19.6281652523656,39.9107066097131,1.41039695163573,21.2465798837797,43.0984455788081 cont.diffExpScore=1.59570160357851 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=1,0,0,0,1,0,0,1 cont.diffExp1.4Score=0.75 cont.diffExp1.3=1,0,-1,0,1,0,0,1 cont.diffExp1.3Score=1.33333333333333 cont.diffExp1.2=1,0,-1,0,1,0,0,1 cont.diffExp1.2Score=1.33333333333333 tran.correlation=0.840897611801619 cont.tran.correlation=-0.293549523595554 tran.covariance=0.0533561246325244 cont.tran.covariance=-0.00345478600455627 tran.mean=164.873039952644 cont.tran.mean=130.079606979363 weightedLogRatios: wLogRatio Lung -4.53079609168021 cerebhem -6.6573785605805 cortex -5.88087935259043 heart -6.58072800612005 kidney -1.06012792748753 liver -2.54173845191435 stomach -4.52770252675728 testicle -5.68180159094794 cont.weightedLogRatios: wLogRatio Lung 1.73700189129359 cerebhem 0.596542813757148 cortex -1.4487742606524 heart 0.694062545267439 kidney 1.68430963205603 liver 0.0538626336705866 stomach 0.80084542047201 testicle 1.74162726398807 varWeightedLogRatios=3.95564960565899 cont.varWeightedLogRatios=1.16806319888898 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.50695263573088 0.095461315077255 47.2123459862615 2.13626188555643e-234 *** df.mm.trans1 -0.0830163240616663 0.0809097211945258 -1.02603646182485 0.305181842228735 df.mm.trans2 0.836491875893814 0.0724192340376035 11.5506865960425 1.14193223594258e-28 *** df.mm.exp2 0.248744181578827 0.0926650637708414 2.68433616140345 0.00741641313482516 ** df.mm.exp3 0.264009061540258 0.0926650637708414 2.84906793128796 0.00449634497686886 ** df.mm.exp4 0.133635231458699 0.0926650637708414 1.44213175948570 0.149653173165089 df.mm.exp5 -0.509519608304494 0.0926650637708414 -5.49850814935524 5.14150732305654e-08 *** df.mm.exp6 -0.254855562179163 0.0926650637708414 -2.75028745255509 0.0060875852876799 ** df.mm.exp7 -0.0146828643357466 0.0926650637708414 -0.158450917079785 0.874141135956116 df.mm.exp8 0.043534000455494 0.0926650637708414 0.469799498149082 0.638625191246682 df.mm.trans1:exp2 -0.0204812791602585 0.0824708243335828 -0.248345755311170 0.803930081762482 df.mm.trans2:exp2 0.310160495336231 0.0618531182501871 5.01446821293108 6.5410927773663e-07 *** df.mm.trans1:exp3 -0.0963697159251276 0.0824708243335828 -1.16853101328690 0.242937710662339 df.mm.trans2:exp3 0.114335152137256 0.0618531182501871 1.84849455244579 0.0648964754147915 . df.mm.trans1:exp4 -0.221289545339054 0.0824708243335828 -2.68324643444776 0.00744040578564169 ** df.mm.trans2:exp4 0.165206364982429 0.0618531182501871 2.67094642365795 0.00771609315158202 ** df.mm.trans1:exp5 0.339485638829471 0.0824708243335828 4.11643319407479 4.243593306332e-05 *** df.mm.trans2:exp5 -0.337386526400814 0.0618531182501871 -5.45464054109824 6.52893210590392e-08 *** df.mm.trans1:exp6 0.117872357734133 0.0824708243335828 1.42926130163748 0.153316116475066 df.mm.trans2:exp6 -0.248568222778807 0.0618531182501871 -4.01868539227698 6.39992502506832e-05 *** df.mm.trans1:exp7 -0.080159823764075 0.0824708243335828 -0.971977962046794 0.331352748156961 df.mm.trans2:exp7 -0.064414376321175 0.0618531182501871 -1.04140871379561 0.297997785539744 df.mm.trans1:exp8 -0.115601101719775 0.0824708243335828 -1.40172118629717 0.161383008570396 df.mm.trans2:exp8 0.107879631452789 0.0618531182501871 1.74412599566009 0.0815178625978271 . df.mm.trans1:probe2 -0.287812991655900 0.0597557892993378 -4.81648715598323 1.74491624200847e-06 *** df.mm.trans1:probe3 0.0201384426975966 0.0597557892993378 0.337012412248728 0.736195169915936 df.mm.trans1:probe4 1.3540839621412 0.0597557892993378 22.6602974877985 2.28878184453424e-88 *** df.mm.trans1:probe5 -0.464191807922616 0.0597557892993378 -7.76814787931786 2.41806278970369e-14 *** df.mm.trans1:probe6 -0.469515109487406 0.0597557892993378 -7.8572321609784 1.25315563308212e-14 *** df.mm.trans1:probe7 -0.26509129109703 0.0597557892993378 -4.43624449120895 1.04239855528425e-05 *** df.mm.trans1:probe8 -0.309168632938113 0.0597557892993378 -5.17386911901336 2.89538199148577e-07 *** df.mm.trans1:probe9 -0.439832838615691 0.0597557892993378 -7.36050588190565 4.51874469792247e-13 *** df.mm.trans1:probe10 -0.386580137397313 0.0597557892993378 -6.46933363160507 1.70544888794085e-10 *** df.mm.trans1:probe11 1.03371842305833 0.0597557892993378 17.299050605458 2.87327436300048e-57 *** df.mm.trans1:probe12 0.520071935158799 0.0597557892993378 8.70328952653567 1.79703177476893e-17 *** df.mm.trans1:probe13 0.234422577645665 0.0597557892993378 3.92301031237926 9.48938833095905e-05 *** df.mm.trans1:probe14 0.929808673820302 0.0597557892993378 15.5601437906303 6.10708937671332e-48 *** df.mm.trans1:probe15 0.383951917765209 0.0597557892993378 6.42535095372699 2.24723872909541e-10 *** df.mm.trans1:probe16 0.136996698047644 0.0597557892993378 2.29260963086571 0.0221269726212455 * df.mm.trans2:probe2 0.179387149578841 0.0597557892993378 3.00200452010144 0.00276478529886365 ** df.mm.trans2:probe3 0.312985352932047 0.0597557892993378 5.23774108922222 2.07573658279824e-07 *** df.mm.trans2:probe4 0.288375335315978 0.0597557892993378 4.82589785353524 1.66670491922561e-06 *** df.mm.trans2:probe5 0.15291233219355 0.0597557892993378 2.55895427014709 0.0106800892602151 * df.mm.trans2:probe6 0.316667069856015 0.0597557892993378 5.29935381272797 1.50067534198155e-07 *** df.mm.trans3:probe2 0.247436235311242 0.0597557892993378 4.14079101309743 3.82552292736479e-05 *** df.mm.trans3:probe3 -0.491757298708254 0.0597557892993378 -8.22945030890428 7.52126976956174e-16 *** df.mm.trans3:probe4 -0.406342781171517 0.0597557892993378 -6.80005713146894 2.03497999204170e-11 *** df.mm.trans3:probe5 0.561749566919563 0.0597557892993378 9.40075553358623 5.44579007522434e-20 *** df.mm.trans3:probe6 -0.577152831432195 0.0597557892993378 -9.6585257796702 5.84581440932883e-21 *** df.mm.trans3:probe7 -0.214436824425680 0.0597557892993378 -3.58855312497825 0.000352572742335012 *** df.mm.trans3:probe8 -0.349625773458435 0.0597557892993378 -5.85091047341098 7.10345746566469e-09 *** df.mm.trans3:probe9 -0.430387311286309 0.0597557892993378 -7.20243705811243 1.35700497898970e-12 *** df.mm.trans3:probe10 0.338723393182200 0.0597557892993378 5.66846153575875 2.00591884898352e-08 *** df.mm.trans3:probe11 0.0333065658751852 0.0597557892993378 0.55737805935992 0.57742371412339 df.mm.trans3:probe12 -0.552990905527179 0.0597557892993378 -9.25418126028012 1.89688567855438e-19 *** df.mm.trans3:probe13 -0.195542075802813 0.0597557892993378 -3.27235365971444 0.00111189919762855 ** df.mm.trans3:probe14 0.308793091748171 0.0597557892993378 5.16758451974114 2.99118628340275e-07 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.89074144783694 0.313939972404315 15.5785878758322 4.89257476532053e-48 *** df.mm.trans1 0.191624645942274 0.266084702672427 0.72016408315731 0.471632504393740 df.mm.trans2 -0.237723025111895 0.23816236259586 -0.998155302629782 0.318503250349148 df.mm.exp2 0.0260260776813770 0.304744047780182 0.0854030714330807 0.931962134296789 df.mm.exp3 0.219713907990945 0.304744047780182 0.720978505048372 0.471131543640904 df.mm.exp4 0.0617908157255088 0.304744047780182 0.202762994636337 0.839371391931377 df.mm.exp5 -0.303068810260903 0.304744047780182 -0.994502804791491 0.320276235570561 df.mm.exp6 -0.181903481547663 0.304744047780182 -0.596905773460334 0.550737712136876 df.mm.exp7 0.152348806102908 0.304744047780182 0.499923812171715 0.617265007225026 df.mm.exp8 -0.0235881744863950 0.304744047780182 -0.077403232838233 0.938321955366428 df.mm.trans1:exp2 -0.149236381632092 0.271218642803036 -0.550243818381138 0.582304416393919 df.mm.trans2:exp2 0.085088954608764 0.203413982102277 0.418304355135140 0.675835895531246 df.mm.trans1:exp3 -0.391630132910581 0.271218642803036 -1.44396465103983 0.149137017944452 df.mm.trans2:exp3 0.254390019238421 0.203413982102277 1.25060242471687 0.211442043147911 df.mm.trans1:exp4 -0.095531162423952 0.271218642803036 -0.35222933584742 0.724758240164957 df.mm.trans2:exp4 0.121051055109472 0.203413982102277 0.595097022625549 0.55194544560758 df.mm.trans1:exp5 0.149062376823227 0.271218642803036 0.549602251831484 0.582744271374486 df.mm.trans2:exp5 0.148553084241928 0.203413982102277 0.730299277889537 0.465419216380960 df.mm.trans1:exp6 -0.0122739518363807 0.271218642803036 -0.0452548235974114 0.963915391675226 df.mm.trans2:exp6 0.333730525710875 0.203413982102277 1.64064693224026 0.101260397365399 df.mm.trans1:exp7 -0.254582512341127 0.271218642803036 -0.938661552576274 0.348185386471366 df.mm.trans2:exp7 -0.0623158099502239 0.203413982102277 -0.306349687991907 0.759417429764201 df.mm.trans1:exp8 -0.0717710223868305 0.271218642803036 -0.264624222159212 0.79136652848879 df.mm.trans2:exp8 -0.0802061327875466 0.203413982102277 -0.394299998252917 0.693463737780382 df.mm.trans1:probe2 -0.158116723422627 0.196516576672449 -0.80459738358955 0.421289019646763 df.mm.trans1:probe3 0.0682942677431648 0.196516576672449 0.347524208387758 0.728288151791934 df.mm.trans1:probe4 -0.0468254026129051 0.196516576672449 -0.238277113339671 0.811726659608991 df.mm.trans1:probe5 -0.0812729603871113 0.196516576672449 -0.413567963391587 0.679300416394548 df.mm.trans1:probe6 -0.132112864699990 0.196516576672449 -0.672273387502544 0.501602095275247 df.mm.trans1:probe7 -0.0980505994940525 0.196516576672449 -0.498943148483 0.617955410755535 df.mm.trans1:probe8 0.0126739755390890 0.196516576672449 0.064493162631333 0.948593522943898 df.mm.trans1:probe9 -0.0735490447428656 0.196516576672449 -0.374263820326243 0.708306362741296 df.mm.trans1:probe10 -0.316472845362409 0.196516576672449 -1.61041297747569 0.107698777012786 df.mm.trans1:probe11 -0.0949681335910521 0.196516576672449 -0.483257622329458 0.629043907933718 df.mm.trans1:probe12 0.0841980812610418 0.196516576672449 0.428452819027995 0.668435807620903 df.mm.trans1:probe13 -0.0323160790386378 0.196516576672449 -0.164444545014143 0.869422377769765 df.mm.trans1:probe14 -0.0764840101770987 0.196516576672449 -0.389198771280152 0.697231787163063 df.mm.trans1:probe15 -0.0634056936281597 0.196516576672449 -0.322648067159462 0.747045359640586 df.mm.trans1:probe16 -0.191048594907535 0.196516576672449 -0.972175468057191 0.331254559315219 df.mm.trans2:probe2 -0.0364054611008138 0.196516576672449 -0.185253894186718 0.853076447775664 df.mm.trans2:probe3 0.0297859374108155 0.196516576672449 0.151569592322292 0.879564299462306 df.mm.trans2:probe4 0.311381479871462 0.196516576672449 1.58450490612030 0.113470633447594 df.mm.trans2:probe5 0.0364497106743982 0.196516576672449 0.185479063861122 0.852899907014043 df.mm.trans2:probe6 0.303563174621045 0.196516576672449 1.54472044934418 0.122805929377247 df.mm.trans3:probe2 0.447595882752929 0.196516576672449 2.27764950077966 0.0230082383877169 * df.mm.trans3:probe3 0.274206668686044 0.196516576672449 1.39533607459023 0.163298360013683 df.mm.trans3:probe4 0.233158116167053 0.196516576672449 1.18645520960645 0.235791750795727 df.mm.trans3:probe5 0.260819806749109 0.196516576672449 1.32721529738349 0.184812834297077 df.mm.trans3:probe6 0.162587283122282 0.196516576672449 0.827346404437325 0.408285323544521 df.mm.trans3:probe7 0.0440153844080758 0.196516576672449 0.223977972511907 0.82283113323194 df.mm.trans3:probe8 -0.0600704671022762 0.196516576672449 -0.305676335907281 0.759929924228111 df.mm.trans3:probe9 0.154091747186429 0.196516576672449 0.784115771786862 0.43320226969002 df.mm.trans3:probe10 0.165704578373300 0.196516576672449 0.84320916422992 0.399361325538248 df.mm.trans3:probe11 0.0714322818024515 0.196516576672449 0.363492398514116 0.716332288997437 df.mm.trans3:probe12 0.0610747817597482 0.196516576672449 0.310786920848652 0.75604286726297 df.mm.trans3:probe13 0.140528565328221 0.196516576672449 0.715097767871524 0.474755454815153 df.mm.trans3:probe14 0.286887294547844 0.196516576672449 1.45986307824823 0.144716867810481