fitVsDatCorrelation=0.945791995397126 cont.fitVsDatCorrelation=0.278276895332495 fstatistic=11397.4727392813,55,761 cont.fstatistic=1290.83086970650,55,761 residuals=-1.00886864250011,-0.0767922551774123,-0.00214714683381433,0.086426056159685,0.731033706530208 cont.residuals=-0.871331356701001,-0.294636436706835,-0.115994907826145,0.19237432037878,1.96154809456127 predictedValues: Include Exclude Both Lung 82.4705222899454 55.5120791694776 83.921912779332 cerebhem 60.8943666992406 64.9782676612056 65.0651884114639 cortex 65.2823609192415 51.7895270559652 72.7253353308152 heart 71.805123124952 51.2170647104468 76.856230646819 kidney 81.4311824866517 53.9858646400645 84.3431997485058 liver 74.3524673590026 53.0526141709984 85.3892723578551 stomach 70.5121451281386 51.6321628099256 76.9892259998756 testicle 72.2468917619858 53.9317216864145 74.2777637404537 diffExp=26.9584431204677,-4.08390096196494,13.4928338632762,20.5880584145052,27.4453178465872,21.2998531880042,18.879982318213,18.3151700755713 diffExpScore=1.04981246167570 diffExp1.5=0,0,0,0,1,0,0,0 diffExp1.5Score=0.5 diffExp1.4=1,0,0,1,1,1,0,0 diffExp1.4Score=0.8 diffExp1.3=1,0,0,1,1,1,1,1 diffExp1.3Score=0.857142857142857 diffExp1.2=1,0,1,1,1,1,1,1 diffExp1.2Score=0.875 cont.predictedValues: Include Exclude Both Lung 75.5890571652764 79.7681239468712 79.5068242304606 cerebhem 63.721693610137 61.4980942055155 67.4401079536009 cortex 72.3237893362684 70.4796706433098 80.2278487727097 heart 80.7377190015008 70.938772088048 67.6551799966016 kidney 82.5330382342 70.6138748263241 63.0289338719763 liver 71.2807242108642 62.3112632161946 74.442365133979 stomach 71.9737644527926 65.9835416933708 64.1099223842178 testicle 71.7555243206496 63.1197663644217 70.8907255147989 cont.diffExp=-4.17906678159481,2.22359940462150,1.84411869295869,9.7989469134528,11.9191634078759,8.9694609946696,5.99022275942175,8.63575795622786 cont.diffExpScore=1.15925936492305 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=-0.398409824174206 cont.tran.correlation=0.60763684218433 tran.covariance=-0.00324608405445906 cont.tran.covariance=0.00452789324448166 tran.mean=63.4433976046035 cont.tran.mean=70.914276082234 weightedLogRatios: wLogRatio Lung 1.66827710384147 cerebhem -0.268840160802608 cortex 0.94071190852014 heart 1.38701477043021 kidney 1.72398386815299 liver 1.39740249263519 stomach 1.27771378306020 testicle 1.20863148465973 cont.weightedLogRatios: wLogRatio Lung -0.234203496402797 cerebhem 0.146933272818202 cortex 0.110243496550043 heart 0.559801801890611 kidney 0.676171894393484 liver 0.564748891380477 stomach 0.367819423977305 testicle 0.539742893429587 varWeightedLogRatios=0.398547915639019 cont.varWeightedLogRatios=0.0960377438113026 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.00470335958519 0.0754866801272082 53.0517881146258 6.84691384120489e-258 *** df.mm.trans1 0.144710145274960 0.0660996144573379 2.18927366616275 0.0288799995919658 * df.mm.trans2 -0.00589681604522585 0.0592761280864657 -0.099480452512421 0.920783006802326 df.mm.exp2 0.108649066991790 0.0781710427974462 1.38988892950190 0.164969038214522 df.mm.exp3 -0.159934797793788 0.0781710427974462 -2.04595962993874 0.0411035752106053 * df.mm.exp4 -0.131062751225665 0.0781710427974462 -1.67661510625194 0.0940284728223473 . df.mm.exp5 -0.0455684699859269 0.0781710427974462 -0.582932865613706 0.560111187123787 df.mm.exp6 -0.166274284023530 0.0781710427974462 -2.12705725896959 0.0337363734477372 * df.mm.exp7 -0.142890542063558 0.0781710427974462 -1.82792165679317 0.0679526872434887 . df.mm.exp8 -0.0391582984069237 0.0781710427974462 -0.500930997023912 0.616564540178169 df.mm.trans1:exp2 -0.411949321303258 0.0733309382197947 -5.61767422187513 2.71501547204193e-08 *** df.mm.trans2:exp2 0.0488031635598354 0.0584978519429773 0.834272745731038 0.404389107057222 df.mm.trans1:exp3 -0.073784250077402 0.0733309382197947 -1.00618172723017 0.314647978429374 df.mm.trans2:exp3 0.0905221064663 0.0584978519429773 1.54744325577184 0.122172137726341 df.mm.trans1:exp4 -0.00742234646579917 0.0733309382197947 -0.101217121258591 0.919404766902966 df.mm.trans2:exp4 0.0505348831016139 0.0584978519429773 0.863875876175324 0.387928275321115 df.mm.trans1:exp5 0.0328858229552971 0.0733309382197947 0.448457687214207 0.653950574019499 df.mm.trans2:exp5 0.0176900765938451 0.0584978519429773 0.30240557569685 0.762425537929489 df.mm.trans1:exp6 0.0626502181933838 0.0733309382197947 0.8543490607689 0.393180473405994 df.mm.trans2:exp6 0.120957785597383 0.0584978519429773 2.06773037948968 0.0390028317949508 * df.mm.trans1:exp7 -0.0137654155494726 0.0733309382197947 -0.187716342974006 0.85114905762073 df.mm.trans2:exp7 0.0704346908788439 0.0584978519429773 1.20405602153567 0.228942296413845 df.mm.trans1:exp8 -0.0931933200366677 0.0733309382197947 -1.27085950758382 0.204166977222226 df.mm.trans2:exp8 0.0102764919468565 0.0584978519429773 0.175672979528785 0.860597597614815 df.mm.trans1:probe2 0.0844988835059709 0.0449058452495135 1.88169007924166 0.0602595548698533 . df.mm.trans1:probe3 0.133433543765753 0.0449058452495135 2.97140701893811 0.00305777035226191 ** df.mm.trans1:probe4 0.161022606024980 0.0449058452495135 3.58578276681529 0.000357523607861162 *** df.mm.trans1:probe5 0.351041492315849 0.0449058452495135 7.8172783602075 1.79783142917332e-14 *** df.mm.trans1:probe6 0.0353996062931079 0.0449058452495135 0.788307314925586 0.430762457010675 df.mm.trans1:probe7 1.25124954049535 0.0449058452495135 27.8638456428767 2.53519904593336e-118 *** df.mm.trans1:probe8 0.0568996920871365 0.0449058452495135 1.26708876697412 0.205511175832855 df.mm.trans1:probe9 0.401605449430746 0.0449058452495135 8.94327781159173 2.83285573803311e-18 *** df.mm.trans1:probe10 1.92267735298899 0.0449058452495135 42.8157479790412 7.50862572958264e-205 *** df.mm.trans1:probe11 -0.107493781519216 0.0449058452495135 -2.39375922938185 0.0169178992274237 * df.mm.trans1:probe12 -0.155186456198788 0.0449058452495135 -3.45581862086138 0.000579043839291632 *** df.mm.trans1:probe13 -0.0928731187596247 0.0449058452495135 -2.06817438227890 0.0389609571288155 * df.mm.trans1:probe14 -0.00101157011779692 0.0449058452495135 -0.0225264687074981 0.982033903477519 df.mm.trans1:probe15 -0.0829877218782646 0.0449058452495135 -1.84803829918253 0.0649846358229547 . df.mm.trans1:probe16 -0.0634416304214444 0.0449058452495135 -1.41276998726868 0.158132205699941 df.mm.trans1:probe17 0.566782573004891 0.0449058452495135 12.6215767647984 2.69303465194662e-33 *** df.mm.trans1:probe18 0.594524735256092 0.0449058452495135 13.2393618682087 3.70984091537803e-36 *** df.mm.trans1:probe19 0.355373878836555 0.0449058452495135 7.91375547797767 8.81453139840113e-15 *** df.mm.trans1:probe20 0.519009472400678 0.0449058452495135 11.5577263832107 1.40096839737980e-28 *** df.mm.trans1:probe21 0.775060415638072 0.0449058452495135 17.2596776952209 1.39688716485469e-56 *** df.mm.trans1:probe22 0.659182770397124 0.0449058452495135 14.6792197482190 3.86623514668240e-43 *** df.mm.trans2:probe2 0.0522450441173291 0.0449058452495135 1.16343526832724 0.245017606459793 df.mm.trans2:probe3 -0.0166873746095843 0.0449058452495135 -0.371608072776785 0.710288118472616 df.mm.trans2:probe4 0.0187724608984507 0.0449058452495135 0.41804047544688 0.67603545627359 df.mm.trans2:probe5 0.0416523756757347 0.0449058452495135 0.927549085075645 0.353935601388509 df.mm.trans2:probe6 0.117546648617866 0.0449058452495135 2.61762467591319 0.0090303287171843 ** df.mm.trans3:probe2 0.178701348494046 0.0449058452495135 3.97946742792871 7.56760032507095e-05 *** df.mm.trans3:probe3 0.147748527334539 0.0449058452495135 3.29018475242128 0.00104731612258551 ** df.mm.trans3:probe4 0.58100624047077 0.0449058452495135 12.9383209967986 9.42241122383781e-35 *** df.mm.trans3:probe5 0.140271769955636 0.0449058452495135 3.12368621893728 0.00185371379549697 ** df.mm.trans3:probe6 0.670492521165435 0.0449058452495135 14.9310745057783 2.11050077097226e-44 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.33954222541347 0.223248311471048 19.4381861023672 1.20752266114904e-68 *** df.mm.trans1 -0.0185350801856224 0.195486505587747 -0.0948151389268284 0.92448662142268 df.mm.trans2 -0.0288409409112859 0.175306365090432 -0.164517363054149 0.869367566550347 df.mm.exp2 -0.2663013092256 0.231187188005248 -1.15188610373839 0.249729621293115 df.mm.exp3 -0.176985920312645 0.231187188005248 -0.76555245919868 0.444180004277184 df.mm.exp4 0.110006437450486 0.231187188005248 0.475832758725321 0.634330093451588 df.mm.exp5 0.198238796095376 0.231187188005248 0.857481756691795 0.391448652371331 df.mm.exp6 -0.239849705218459 0.231187188005248 -1.03746971139687 0.299846537457736 df.mm.exp7 -0.0234847789052682 0.231187188005248 -0.101583392695339 0.91911412059578 df.mm.exp8 -0.171433437648956 0.231187188005248 -0.741535199801228 0.45859777139684 df.mm.trans1:exp2 0.0955148466378424 0.216872806017815 0.440418733872960 0.659758928187068 df.mm.trans2:exp2 0.0061835196623977 0.173004649945466 0.0357419275397906 0.971497511559725 df.mm.trans1:exp3 0.132827505601999 0.216872806017815 0.612467316861698 0.540411578561827 df.mm.trans2:exp3 0.0531862535105428 0.173004649945466 0.307426728283361 0.758602698274181 df.mm.trans1:exp4 -0.0441120998004417 0.216872806017815 -0.203400788740743 0.838876158021289 df.mm.trans2:exp4 -0.227313272784129 0.173004649945466 -1.31391423788772 0.189270999911495 df.mm.trans1:exp5 -0.110351645691627 0.216872806017815 -0.50883117951894 0.611018049113583 df.mm.trans2:exp5 -0.320136118987410 0.173004649945466 -1.85044806072161 0.0646363922669894 . df.mm.trans1:exp6 0.181164122196825 0.216872806017815 0.83534734263522 0.403784348749785 df.mm.trans2:exp6 -0.00713207070891731 0.173004649945466 -0.0412247341974071 0.967127548490438 df.mm.trans1:exp7 -0.0255250772999009 0.216872806017815 -0.117696071575724 0.906339536035507 df.mm.trans2:exp7 -0.166233853815323 0.173004649945466 -0.960863502037215 0.336925996113758 df.mm.trans1:exp8 0.119386757123171 0.216872806017815 0.550492057143224 0.582143473466281 df.mm.trans2:exp8 -0.0626565626384524 0.173004649945466 -0.362166928219575 0.717327838740774 df.mm.trans1:probe2 0.00208741023282751 0.132806928457311 0.0157176305263206 0.987463781298625 df.mm.trans1:probe3 0.0259518256384710 0.132806928457311 0.195410178820700 0.845124010420643 df.mm.trans1:probe4 0.174059046827589 0.132806928457311 1.31061721590480 0.190382512731402 df.mm.trans1:probe5 -0.0149332083275987 0.132806928457311 -0.112442991499489 0.910501822031159 df.mm.trans1:probe6 0.178454134533761 0.132806928457311 1.34371102928657 0.179442349618318 df.mm.trans1:probe7 -0.143608953954629 0.132806928457311 -1.08133630995607 0.279890085400176 df.mm.trans1:probe8 -0.0896315304808206 0.132806928457311 -0.674901012484687 0.499943646438875 df.mm.trans1:probe9 -0.0453378771830108 0.132806928457311 -0.341381866967762 0.732910362086179 df.mm.trans1:probe10 -0.0535368393148981 0.132806928457311 -0.403117818752255 0.686974780523706 df.mm.trans1:probe11 0.0165337807331820 0.132806928457311 0.124494865781770 0.900956341995402 df.mm.trans1:probe12 -0.0359274309747489 0.132806928457311 -0.270523770047865 0.78683068382629 df.mm.trans1:probe13 0.0376529625760501 0.132806928457311 0.283516553040025 0.776858006234032 df.mm.trans1:probe14 -0.137780980389247 0.132806928457311 -1.03745325631512 0.299854197556354 df.mm.trans1:probe15 0.0191647291229305 0.132806928457311 0.144305190591700 0.885297685912378 df.mm.trans1:probe16 -0.089133156079281 0.132806928457311 -0.671148388978302 0.502329659362569 df.mm.trans1:probe17 0.276125213562223 0.132806928457311 2.07914765268424 0.0379381425086694 * df.mm.trans1:probe18 0.0176235380078412 0.132806928457311 0.132700441253756 0.894465373328334 df.mm.trans1:probe19 -0.100227277744515 0.132806928457311 -0.754684103523494 0.450672024190572 df.mm.trans1:probe20 0.0168988597065762 0.132806928457311 0.127243811018550 0.898781044927922 df.mm.trans1:probe21 0.0317171817460203 0.132806928457311 0.238821740058654 0.811308110085643 df.mm.trans1:probe22 0.0343712394757955 0.132806928457311 0.258806071904928 0.795854858022086 df.mm.trans2:probe2 0.077231484731589 0.132806928457311 0.581532045268361 0.561054135114362 df.mm.trans2:probe3 0.119486076467061 0.132806928457311 0.899697612579512 0.368565795520451 df.mm.trans2:probe4 0.109273651048527 0.132806928457311 0.82280083063326 0.410879010092914 df.mm.trans2:probe5 0.224228495917929 0.132806928457311 1.68837950340824 0.0917480989545354 . df.mm.trans2:probe6 0.290852582216469 0.132806928457311 2.19004072750586 0.0288241016390424 * df.mm.trans3:probe2 0.0550203645549161 0.132806928457311 0.414288359756785 0.678779682563034 df.mm.trans3:probe3 0.101241807926953 0.132806928457311 0.762323239479899 0.446103315899377 df.mm.trans3:probe4 0.32064089408122 0.132806928457311 2.41433860270540 0.0159987785307596 * df.mm.trans3:probe5 0.0231331785526758 0.132806928457311 0.174186533951138 0.861765194611043 df.mm.trans3:probe6 0.00202367310381756 0.132806928457311 0.0152377073043146 0.987846532940016