fitVsDatCorrelation=0.884828438836549 cont.fitVsDatCorrelation=0.220075655651418 fstatistic=9432.80287997597,65,991 cont.fstatistic=2140.11464651099,65,991 residuals=-0.759510129787856,-0.0936150790037037,-0.0103212929910335,0.083112903235938,0.905882770918522 cont.residuals=-0.644772278724114,-0.220098887203721,-0.0674737743320256,0.129634743511246,2.02310139064961 predictedValues: Include Exclude Both Lung 52.063327631039 48.3990283128842 62.802452359099 cerebhem 55.3618160726249 58.0221930307328 67.3800082123966 cortex 53.9649474427718 48.5063768102304 80.123942269862 heart 52.8320135030411 51.3325080004729 65.157984415105 kidney 54.1189506023061 52.7465021702261 169.196489776470 liver 55.4568957300255 50.2873780160761 77.879007732262 stomach 54.1105347271899 49.451693940662 60.5857923839956 testicle 53.1815186985944 51.0953942362681 67.2498741214587 diffExp=3.6642993181548,-2.66037695810785,5.4585706325414,1.49950550256822,1.37244843207997,5.16951771394939,4.65884078652788,2.08612446232633 diffExpScore=1.19420052728693 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,0 diffExp1.3Score=0 diffExp1.2=0,0,0,0,0,0,0,0 diffExp1.2Score=0 cont.predictedValues: Include Exclude Both Lung 63.7923725127786 55.8983896674355 58.2895907151067 cerebhem 60.6214753745393 66.9017514944148 63.3676173826082 cortex 56.2593156009688 61.9971637133415 56.9640039620833 heart 60.4230095450465 60.1937919811688 57.3127328124373 kidney 62.6138545245781 78.1372849732856 64.3734546849835 liver 63.3805992795103 70.3768603222004 59.9683735216962 stomach 58.5850046455721 65.026260065401 59.4687299079906 testicle 59.8035500656465 69.9120892417855 57.3992269548431 cont.diffExp=7.89398284534305,-6.28027611987548,-5.73784811237264,0.229217563877711,-15.5234304487075,-6.99626104269005,-6.44125541982894,-10.1085391761390 cont.diffExpScore=1.34678961572591 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,-1,0,0,0 cont.diffExp1.2Score=0.5 tran.correlation=0.523466626957089 cont.tran.correlation=0.174865317059504 tran.covariance=0.000668271468292016 cont.tran.covariance=0.000650800372597781 tran.mean=52.5581924328216 cont.tran.mean=63.3701733129796 weightedLogRatios: wLogRatio Lung 0.285791737457597 cerebhem -0.189495248755810 cortex 0.419627812623968 heart 0.113811035737153 kidney 0.102191453974426 liver 0.388147397337158 stomach 0.355269698258151 testicle 0.158213667657501 cont.weightedLogRatios: wLogRatio Lung 0.540226182814691 cerebhem -0.409478254425057 cortex -0.396094608872014 heart 0.0155811057037028 kidney -0.940789843483201 liver -0.439926415195118 stomach -0.430042026987382 testicle -0.651111279419358 varWeightedLogRatios=0.040773093220713 cont.varWeightedLogRatios=0.197861808794296 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.77467403783635 0.0777535000280436 48.546676824515 3.29068584229159e-264 *** df.mm.trans1 0.101534356225789 0.0668632993666908 1.51853643459853 0.129198165629324 df.mm.trans2 0.123469009100532 0.0583423432839014 2.11628471108395 0.0345694117908910 * df.mm.exp2 0.172420900510560 0.0738765094035066 2.33390697398565 0.0197997183311975 * df.mm.exp3 -0.205491160866571 0.0738765094035066 -2.78154940624221 0.00551264999243001 ** df.mm.exp4 0.0366802776256069 0.0738765094035066 0.496507995867301 0.619646159031706 df.mm.exp5 -0.866325258453793 0.0738765094035066 -11.7266674542243 7.85124185896539e-30 *** df.mm.exp6 -0.11374269341043 0.0738765094035067 -1.53963275104374 0.123969121811520 df.mm.exp7 0.0960183594585062 0.0738765094035066 1.29971435079672 0.194001131335323 df.mm.exp8 0.00704372621310695 0.0738765094035066 0.0953445996566347 0.9240603939853 df.mm.trans1:exp2 -0.110991601634544 0.0681533854649743 -1.62855595327081 0.103724887740318 df.mm.trans2:exp2 0.00892493796836173 0.0469714793934601 0.190007597878732 0.849342088817005 df.mm.trans1:exp3 0.241365058554756 0.0681533854649743 3.54149771002645 0.000416378873347291 *** df.mm.trans2:exp3 0.207706693449517 0.0469714793934601 4.42197469893691 1.08608789857207e-05 *** df.mm.trans1:exp4 -0.0220237709788142 0.0681533854649743 -0.323150065525839 0.746649768585123 df.mm.trans2:exp4 0.0221642207368163 0.0469714793934601 0.471865502705504 0.637126668490298 df.mm.trans1:exp5 0.90504885469169 0.0681533854649743 13.2795876318839 3.70350152685328e-37 *** df.mm.trans2:exp5 0.95234298170124 0.0469714793934601 20.2749198875315 9.97511617788307e-77 *** df.mm.trans1:exp6 0.176887942222770 0.0681533854649743 2.59543881812998 0.00958669254813382 ** df.mm.trans2:exp6 0.152017067611888 0.0469714793934601 3.23636959224779 0.00125072178881411 ** df.mm.trans1:exp7 -0.0574502823031877 0.0681533854649743 -0.842955664069144 0.399456643308443 df.mm.trans2:exp7 -0.074501783692358 0.0469714793934601 -1.58610681746445 0.113034092627925 df.mm.trans1:exp8 0.0142064002206358 0.0681533854649743 0.208447461908358 0.834922434315355 df.mm.trans2:exp8 0.0471708972307482 0.0469714793934601 1.00424550897402 0.315505432051815 df.mm.trans1:probe2 0.223924615732458 0.0493818192650607 4.53455581558318 6.47791259100636e-06 *** df.mm.trans1:probe3 0.385668389153187 0.0493818192650607 7.80992670770356 1.45226344741273e-14 *** df.mm.trans1:probe4 0.283037824094911 0.0493818192650607 5.73162002346824 1.31947372086556e-08 *** df.mm.trans1:probe5 -0.067515986649607 0.0493818192650607 -1.36722355827374 0.171865269922819 df.mm.trans1:probe6 0.375692505751314 0.0493818192650607 7.60791140024137 6.46391360438584e-14 *** df.mm.trans1:probe7 0.302732348011887 0.0493818192650607 6.13044137533589 1.26361301262064e-09 *** df.mm.trans1:probe8 0.0884136487662676 0.0493818192650607 1.79040890113223 0.0736933672127789 . df.mm.trans1:probe9 -0.0562430939038914 0.0493818192650607 -1.13894333463096 0.255002026770603 df.mm.trans1:probe10 0.422252308776691 0.0493818192650607 8.5507645336074 4.58237214636444e-17 *** df.mm.trans1:probe11 -0.102316268617769 0.0493818192650607 -2.07194206573432 0.0385290517835932 * df.mm.trans1:probe12 -0.11756659248212 0.0493818192650607 -2.3807667322071 0.0174648018179304 * df.mm.trans1:probe13 -0.0212120749601353 0.0493818192650607 -0.429552318562381 0.667614703530822 df.mm.trans1:probe14 0.0575976580813733 0.0493818192650607 1.16637375735822 0.243743974571624 df.mm.trans1:probe15 0.00114620713552984 0.0493818192650607 0.0232111160056191 0.981486544370346 df.mm.trans1:probe16 -0.0159181837974367 0.0493818192650607 -0.322349075719440 0.747256248198672 df.mm.trans1:probe17 0.0104766392335431 0.0493818192650607 0.212155797203602 0.832029117041913 df.mm.trans1:probe18 0.377455851136531 0.0493818192650607 7.64361979275223 4.97661445489878e-14 *** df.mm.trans1:probe19 0.0630019667113671 0.0493818192650607 1.27581299451928 0.202320585502057 df.mm.trans1:probe20 0.102364965024356 0.0493818192650607 2.07292818587555 0.0384369661518686 * df.mm.trans1:probe21 0.154977279767644 0.0493818192650607 3.13834690730594 0.00174924250723142 ** df.mm.trans1:probe22 0.148825512364699 0.0493818192650607 3.01377135511891 0.00264585394321295 ** df.mm.trans1:probe23 -0.0229556448048544 0.0493818192650607 -0.464860249105815 0.642133657521488 df.mm.trans1:probe24 0.303752184778070 0.0493818192650607 6.15109344489026 1.11485315704651e-09 *** df.mm.trans2:probe2 -0.0695965489729916 0.0493818192650607 -1.40935571043721 0.159043730076435 df.mm.trans2:probe3 -0.0958754893616765 0.0493818192650607 -1.9415139172386 0.0524791358769481 . df.mm.trans2:probe4 0.0115464287765067 0.0493818192650606 0.233819428857619 0.815173457593136 df.mm.trans2:probe5 -0.124616443305433 0.0493818192650607 -2.52352880392164 0.0117737594774058 * df.mm.trans2:probe6 -0.0947241390545456 0.0493818192650607 -1.91819865011669 0.0553729299667841 . df.mm.trans3:probe2 0.00408393169377427 0.0493818192650607 0.082701118641528 0.9341058961927 df.mm.trans3:probe3 0.506558151108146 0.0493818192650607 10.2579888438123 1.55807045873419e-23 *** df.mm.trans3:probe4 0.661999829526568 0.0493818192650607 13.4057399945764 8.82048402261385e-38 *** df.mm.trans3:probe5 -0.157990438436564 0.0493818192650606 -3.19936447842350 0.0014210320849309 ** df.mm.trans3:probe6 -0.268327635571241 0.0493818192650607 -5.43373329627595 6.94671594441624e-08 *** df.mm.trans3:probe7 -0.211384815815851 0.0493818192650607 -4.28062025583196 2.04467560738379e-05 *** df.mm.trans3:probe8 0.342922405570991 0.0493818192650607 6.94430482057231 6.87365756387329e-12 *** df.mm.trans3:probe9 0.236620876635615 0.0493818192650607 4.79165976784966 1.9068915321545e-06 *** df.mm.trans3:probe10 -0.0414094523721943 0.0493818192650607 -0.83855663862698 0.401920365242511 df.mm.trans3:probe11 0.243421413646101 0.0493818192650607 4.92937314317073 9.66603734285003e-07 *** df.mm.trans3:probe12 -0.0999368737876296 0.0493818192650607 -2.02375844541512 0.0432629564642908 * df.mm.trans3:probe13 0.437746075889381 0.0493818192650607 8.8645190153839 3.50569204630773e-18 *** df.mm.trans3:probe14 0.310130609857142 0.0493818192650607 6.28025889837093 5.05076826883937e-10 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.15477216646565 0.162791238362071 25.5220871114994 7.79213615397085e-111 *** df.mm.trans1 -0.00369170761036604 0.139990602364545 -0.0263711102603344 0.978966646027398 df.mm.trans2 -0.125280545947639 0.122150415205822 -1.02562521573539 0.305318555019501 df.mm.exp2 0.0451757208952358 0.154674046150031 0.292070467022090 0.77029387786144 df.mm.exp3 0.000895044611008263 0.154674046150031 0.00578665027059605 0.995384111483334 df.mm.exp4 0.0366707247497022 0.154674046150031 0.237083891334505 0.812640708938025 df.mm.exp5 0.217006889479144 0.154674046150031 1.40299484548721 0.160931594606205 df.mm.exp6 0.195459342834048 0.154674046150031 1.26368545789806 0.206640127857456 df.mm.exp7 0.0460736611198589 0.154674046150031 0.297875838039229 0.765860365836263 df.mm.exp8 0.174527102129601 0.154674046150031 1.12835415167398 0.259443469623402 df.mm.trans1:exp2 -0.0961601415920642 0.142691634645504 -0.67390174505296 0.500530932264677 df.mm.trans2:exp2 0.134513854314004 0.0983434224234534 1.36779716425574 0.171685658581072 df.mm.trans1:exp3 -0.126557036666982 0.142691634645504 -0.88692681236286 0.375333491238583 df.mm.trans2:exp3 0.102658020462958 0.0983434224234534 1.04387276681227 0.296798825389207 df.mm.trans1:exp4 -0.0909343697329029 0.142691634645504 -0.637278912382046 0.524090379322575 df.mm.trans2:exp4 0.0373629266453968 0.0983434224234534 0.379922985438895 0.704083989785822 df.mm.trans1:exp5 -0.235653947688833 0.142691634645504 -1.65149098105352 0.0989551719349515 . df.mm.trans2:exp5 0.117924881507648 0.0983434224234534 1.19911305303043 0.230770624464909 df.mm.trans1:exp6 -0.20193516338747 0.142691634645504 -1.41518571771322 0.157328205937849 df.mm.trans2:exp6 0.0348696053291897 0.0983434224234534 0.35456977670602 0.72298735745074 df.mm.trans1:exp7 -0.131228520815931 0.142691634645504 -0.919665130629056 0.357971576720791 df.mm.trans2:exp7 0.105181955829803 0.0983434224234534 1.06953727293427 0.285088077069617 df.mm.trans1:exp8 -0.239095707401282 0.142691634645504 -1.67561124375147 0.094129816604375 . df.mm.trans2:exp8 0.0491759103164932 0.0983434224234534 0.500042698379444 0.61715602568295 df.mm.trans1:probe2 0.0268019667104920 0.103389911808881 0.259231933189345 0.795510132145918 df.mm.trans1:probe3 -0.0377869686282317 0.103389911808881 -0.365480228845557 0.714830955428893 df.mm.trans1:probe4 0.0528141947823069 0.103389911808881 0.510825416699605 0.609587083950837 df.mm.trans1:probe5 0.031909119321288 0.103389911808881 0.30862894418822 0.75766866632493 df.mm.trans1:probe6 0.122468419631333 0.103389911808881 1.18452968465356 0.236487458208267 df.mm.trans1:probe7 -0.00794719253459088 0.103389911808881 -0.0768662280057025 0.938745479557436 df.mm.trans1:probe8 -0.0540844042295177 0.103389911808881 -0.523111039397097 0.601013922347479 df.mm.trans1:probe9 -0.0161755433923744 0.103389911808881 -0.156451854048153 0.875708732066074 df.mm.trans1:probe10 0.00478424869889518 0.103389911808881 0.0462738444708127 0.96310130896069 df.mm.trans1:probe11 0.0254936169310164 0.103389911808881 0.246577412486260 0.805286353270975 df.mm.trans1:probe12 -0.00999985511169531 0.103389911808881 -0.0967198340412588 0.922968444353152 df.mm.trans1:probe13 -0.0450710834280651 0.103389911808881 -0.435933087082813 0.66298021986643 df.mm.trans1:probe14 0.0631532762176219 0.103389911808881 0.610826289651573 0.541454653399425 df.mm.trans1:probe15 -0.0503836956713162 0.103389911808881 -0.487317329029664 0.626141244873407 df.mm.trans1:probe16 0.00331730432998787 0.103389911808881 0.0320853773056699 0.974410425362845 df.mm.trans1:probe17 0.0995737399278277 0.103389911808881 0.963089514109393 0.335737543532597 df.mm.trans1:probe18 -0.0078299004508929 0.103389911808881 -0.0757317644816905 0.939647789230164 df.mm.trans1:probe19 0.0800923700606402 0.103389911808881 0.774663297988816 0.438723428696132 df.mm.trans1:probe20 0.0128416087841722 0.103389911808881 0.124205626637058 0.901177655173105 df.mm.trans1:probe21 -0.040392242458269 0.103389911808881 -0.390678759190117 0.696118668691574 df.mm.trans1:probe22 -0.117910083986723 0.103389911808881 -1.14044089915352 0.254378199771208 df.mm.trans1:probe23 -0.0298502336229211 0.103389911808881 -0.288715147354997 0.77285974952655 df.mm.trans1:probe24 0.0672018458915906 0.103389911808881 0.649984555706125 0.51585283647851 df.mm.trans2:probe2 -0.0863931163009223 0.103389911808881 -0.835604894030887 0.403578628695668 df.mm.trans2:probe3 0.0119939033606055 0.103389911808881 0.116006515053196 0.907670881038019 df.mm.trans2:probe4 -0.0317948104262356 0.103389911808881 -0.307523334433337 0.75850967968121 df.mm.trans2:probe5 0.0125982848199289 0.103389911808881 0.121852167194196 0.903040801933254 df.mm.trans2:probe6 -0.0255252244993898 0.103389911808881 -0.246883124792426 0.805049809524348 df.mm.trans3:probe2 0.124814611414221 0.103389911808881 1.20722234143061 0.227634587880408 df.mm.trans3:probe3 0.00315400866808063 0.103389911808881 0.0305059614898493 0.975669681414801 df.mm.trans3:probe4 -0.0251164693387865 0.103389911808881 -0.242929594380688 0.808110210065468 df.mm.trans3:probe5 0.0293468556741231 0.103389911808881 0.283846413645963 0.776587374733546 df.mm.trans3:probe6 0.0133224534881861 0.103389911808881 0.128856416018742 0.897497409933116 df.mm.trans3:probe7 0.0379243320277174 0.103389911808881 0.366808824615516 0.7138399300376 df.mm.trans3:probe8 0.0301731044996944 0.103389911808881 0.291837994363225 0.77047157296654 df.mm.trans3:probe9 0.0935188664718281 0.103389911808881 0.90452603001249 0.365936373205773 df.mm.trans3:probe10 0.180713315846843 0.103389911808881 1.74788151653419 0.080794233056215 . df.mm.trans3:probe11 0.0284126029800534 0.103389911808881 0.274810206169582 0.783519336220038 df.mm.trans3:probe12 0.00844879739470908 0.103389911808881 0.0817178121819752 0.934887614591423 df.mm.trans3:probe13 0.0332412317560217 0.103389911808881 0.321513300228645 0.747889233342896 df.mm.trans3:probe14 -0.00322306452875065 0.103389911808881 -0.0311738783055409 0.975137148893992