fitVsDatCorrelation=0.907743983652383 cont.fitVsDatCorrelation=0.211030157890475 fstatistic=6870.72047269273,61,899 cont.fstatistic=1253.59232060602,61,899 residuals=-0.971045221690765,-0.110238403778446,0.00295302068582443,0.114585067677791,0.950044014406185 cont.residuals=-0.768377910522926,-0.312064101367926,-0.126692889722914,0.179955318284937,2.28663620534016 predictedValues: Include Exclude Both Lung 50.3844540988757 52.171907334769 68.8709319457769 cerebhem 51.5965070223561 48.291937212475 64.960494333495 cortex 53.2541826000666 48.599053982953 66.5902472195337 heart 60.5129161350767 50.4615169039999 76.0015854547209 kidney 158.410314869851 55.1137354689344 201.104925955316 liver 72.2673195215606 51.468884979437 98.1219094194426 stomach 65.170821004871 51.5973421938688 88.6146781442365 testicle 51.5505144851338 49.0813444522194 67.5806678168476 diffExp=-1.78745323589337,3.30456980988117,4.65512861711363,10.0513992310769,103.296579400917,20.7984345421236,13.5734788110022,2.46917003291438 diffExpScore=1.01636302161855 diffExp1.5=0,0,0,0,1,0,0,0 diffExp1.5Score=0.5 diffExp1.4=0,0,0,0,1,1,0,0 diffExp1.4Score=0.666666666666667 diffExp1.3=0,0,0,0,1,1,0,0 diffExp1.3Score=0.666666666666667 diffExp1.2=0,0,0,0,1,1,1,0 diffExp1.2Score=0.75 cont.predictedValues: Include Exclude Both Lung 80.3860426208813 65.0482993670872 72.0298570870254 cerebhem 74.8485244168162 63.5942639601756 72.6210511417508 cortex 68.896579729499 76.7038451977405 73.0496915050855 heart 77.3736584153093 83.8803240224576 72.869829322959 kidney 72.8675676039578 61.8639838873563 73.8055108996031 liver 74.0100933368704 74.0589122459137 79.8814738612511 stomach 80.5128569052909 59.2297195243327 69.5016519291444 testicle 75.6475815131418 69.6355865601846 68.4998574252271 cont.diffExp=15.3377432537941,11.2542604566406,-7.80726546824145,-6.50666560714824,11.0035837166015,-0.0488189090433195,21.2831373809582,6.01199495295725 cont.diffExpScore=1.5380669971884 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,1,0 cont.diffExp1.3Score=0.5 cont.diffExp1.2=1,0,0,0,0,0,1,0 cont.diffExp1.2Score=0.666666666666667 tran.correlation=0.815848652178922 cont.tran.correlation=-0.333860868546676 tran.covariance=0.0137455719618436 cont.tran.covariance=-0.00217580380532647 tran.mean=60.620797016653 cont.tran.mean=72.4098649566884 weightedLogRatios: wLogRatio Lung -0.137253676891449 cerebhem 0.258824185143371 cortex 0.359425717970404 heart 0.728769222277513 kidney 4.79042771758944 liver 1.39514066224326 stomach 0.948235483687629 testicle 0.192308903309275 cont.weightedLogRatios: wLogRatio Lung 0.90632954390942 cerebhem 0.689900328057052 cortex -0.46011194402436 heart -0.354389899026093 kidney 0.688674743251355 liver -0.0028384404033702 stomach 1.30009274978798 testicle 0.354813254574572 varWeightedLogRatios=2.495602325008 cont.varWeightedLogRatios=0.386625406256059 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.7877946584584 0.0942244009728457 40.1997212967158 4.92616396229426e-203 *** df.mm.trans1 -0.0304672867967009 0.0805548100176762 -0.378218095108354 0.705357872994623 df.mm.trans2 0.176869633437526 0.0710195951930377 2.49043426615962 0.0129382690697423 * df.mm.exp2 0.00494663448335236 0.0903199719010604 0.0547678921863603 0.956335548766256 df.mm.exp3 0.0181296326378706 0.0903199719010604 0.200726730271023 0.840957658738611 df.mm.exp4 0.0513209830323983 0.0903199719010604 0.568213009284558 0.570032230990983 df.mm.exp5 0.128768120491809 0.0903199719010604 1.42568822577654 0.154305473280475 df.mm.exp6 -0.0068538665066455 0.0903199719010604 -0.0758842851961188 0.939528042603772 df.mm.exp7 -0.00580816199565204 0.0903199719010604 -0.0643065080004067 0.948740467363464 df.mm.exp8 -0.0192734118524695 0.0903199719010603 -0.2133903659047 0.83107087632617 df.mm.trans1:exp2 0.0188246652700998 0.0821090653646003 0.229264152338235 0.818715760559629 df.mm.trans2:exp2 -0.0822261955359033 0.058637601363584 -1.40227761067609 0.161177563698926 df.mm.trans1:exp3 0.0372640382696009 0.0821090653646003 0.453835859708452 0.65005650758534 df.mm.trans2:exp3 -0.0890697436499531 0.058637601363584 -1.51898682037954 0.129117399192697 df.mm.trans1:exp4 0.131853171977091 0.0821090653646003 1.60582965342017 0.108662520734790 df.mm.trans2:exp4 -0.0846541551149971 0.058637601363584 -1.44368379924167 0.149176314926730 df.mm.trans1:exp5 1.01673779881863 0.0821090653646003 12.3827715527375 1.25179570520213e-32 *** df.mm.trans2:exp5 -0.0739133291986223 0.058637601363584 -1.26051078966073 0.207812218979306 df.mm.trans1:exp6 0.36754320425558 0.0821090653646003 4.47628045239009 8.57106638175643e-06 *** df.mm.trans2:exp6 -0.0067128599253246 0.058637601363584 -0.114480465933477 0.908882492797259 df.mm.trans1:exp7 0.26313732307884 0.0821090653646003 3.20472924530799 0.00139954465193538 ** df.mm.trans2:exp7 -0.00526585107190621 0.058637601363584 -0.0898033164633588 0.92846351540793 df.mm.trans1:exp8 0.0421529255010341 0.0821090653646003 0.513377241768088 0.607813599837992 df.mm.trans2:exp8 -0.0417917519607389 0.058637601363584 -0.712712508508117 0.476208614064143 df.mm.trans1:probe2 0.262429968941853 0.0594936700237959 4.4110569886996 1.15322913981469e-05 *** df.mm.trans1:probe3 0.213695679523294 0.0594936700237959 3.59190615468539 0.000346068884800655 *** df.mm.trans1:probe4 0.560618739478179 0.0594936700237959 9.42316618312413 3.59219991099099e-20 *** df.mm.trans1:probe5 0.0731891152608323 0.0594936700237959 1.23020004029939 0.218944013419212 df.mm.trans1:probe6 0.138446619671169 0.0594936700237959 2.32708151330712 0.0201822284703227 * df.mm.trans1:probe7 0.424875731832109 0.0594936700237959 7.14152836196136 1.90467500404119e-12 *** df.mm.trans1:probe8 0.619110708018609 0.0594936700237959 10.4063290728405 5.03504201510547e-24 *** df.mm.trans1:probe9 0.0678064050174956 0.0594936700237959 1.13972469660007 0.254704583386900 df.mm.trans1:probe10 0.0983981834113348 0.0594936700237959 1.65392693663003 0.0984914511444516 . df.mm.trans1:probe11 0.102515178551662 0.0594936700237959 1.72312749424700 0.0852093345012263 . df.mm.trans1:probe12 0.161432052498189 0.0594936700237959 2.7134324111056 0.00678638268794381 ** df.mm.trans1:probe13 0.154464066217023 0.0594936700237959 2.59631093787359 0.00957688078890221 ** df.mm.trans1:probe14 0.149120110175894 0.0594936700237959 2.5064869946038 0.0123693182728821 * df.mm.trans1:probe15 0.436742259622368 0.0594936700237959 7.34098702345447 4.74509334146706e-13 *** df.mm.trans1:probe16 0.407930055291228 0.0594936700237959 6.85669677342256 1.30908052552157e-11 *** df.mm.trans1:probe17 0.379271983726 0.0594936700237959 6.37499726566375 2.92098568906018e-10 *** df.mm.trans1:probe18 0.389680754414501 0.0594936700237959 6.54995320104877 9.67310132348253e-11 *** df.mm.trans1:probe19 0.416662490756083 0.0594936700237959 7.0034760099592 4.88906416799283e-12 *** df.mm.trans1:probe20 0.463690281732028 0.0594936700237959 7.79394314633076 1.79146798294864e-14 *** df.mm.trans2:probe2 0.00765724023211666 0.0594936700237959 0.128706805766966 0.897618437149688 df.mm.trans2:probe3 -0.0722172912766013 0.0594936700237959 -1.21386512628514 0.225118023995278 df.mm.trans2:probe4 -0.0297781026426708 0.0594936700237959 -0.500525562312097 0.616827569279334 df.mm.trans2:probe5 -0.0737959586647964 0.0594936700237959 -1.24040017425854 0.215151043404882 df.mm.trans2:probe6 -0.0342681984117082 0.0594936700237959 -0.575997385906801 0.564761109263101 df.mm.trans3:probe2 0.0406926878371787 0.0594936700237959 0.683983486325566 0.494161857727415 df.mm.trans3:probe3 0.443447668261458 0.0594936700237959 7.4536949575323 2.13263795525822e-13 *** df.mm.trans3:probe4 1.07629232226686 0.0594936700237959 18.0908712109435 1.27191128753455e-62 *** df.mm.trans3:probe5 -0.0187959586047919 0.0594936700237959 -0.315932074744658 0.752127397710939 df.mm.trans3:probe6 0.412705395228525 0.0594936700237959 6.93696312672346 7.65635673491132e-12 *** df.mm.trans3:probe7 0.156376694040802 0.0594936700237959 2.62845936346263 0.00872356944854346 ** df.mm.trans3:probe8 0.359641438097529 0.0594936700237959 6.04503702584967 2.18707775115992e-09 *** df.mm.trans3:probe9 0.0470723497752842 0.0594936700237959 0.791216103435147 0.429026586232554 df.mm.trans3:probe10 0.606299074118792 0.0594936700237959 10.1909845850204 3.72798588270221e-23 *** df.mm.trans3:probe11 0.258984931956122 0.0594936700237959 4.35315104703635 1.49606173286973e-05 *** df.mm.trans3:probe12 0.29309682245747 0.0594936700237959 4.92652112973093 9.96186466375993e-07 *** df.mm.trans3:probe13 -0.0649826188336436 0.0594936700237959 -1.09226105580060 0.275010990767316 df.mm.trans3:probe14 0.561689941897336 0.0594936700237959 9.44117150064326 3.07262493591019e-20 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.31636604527352 0.219540005429744 19.6609544434708 7.30767018979138e-72 *** df.mm.trans1 0.129636633506841 0.187690271798801 0.69069447374347 0.489935850661689 df.mm.trans2 -0.164866281664840 0.165473509550790 -0.996330361955825 0.319357747756612 df.mm.exp2 -0.102155074848320 0.210442803741331 -0.485429166653211 0.627490222945134 df.mm.exp3 -0.00347144753594932 0.210442803741331 -0.0164959194338444 0.98684241758859 df.mm.exp4 0.204472863414409 0.210442803741331 0.971631530179288 0.331495235208299 df.mm.exp5 -0.172741492405547 0.210442803741331 -0.820847704623224 0.411950626691542 df.mm.exp6 -0.056371499257752 0.210442803741331 -0.267870881092431 0.788860154712073 df.mm.exp7 -0.0564001095516504 0.210442803741331 -0.268006833918519 0.788755537885074 df.mm.exp8 0.0576396360479741 0.210442803741331 0.273896921269034 0.784226754853095 df.mm.trans1:exp2 0.0307809097773869 0.191311639764847 0.160894077408054 0.872212974477247 df.mm.trans2:exp2 0.0795482906778232 0.136623838292782 0.582243125883732 0.560548914850587 df.mm.trans1:exp3 -0.150762578629946 0.191311639764847 -0.788047077612518 0.430876903291601 df.mm.trans2:exp3 0.168293226464887 0.136623838292782 1.23179987158784 0.218345948449488 df.mm.trans1:exp4 -0.242667033167930 0.191311639764847 -1.26843841527994 0.204969789030783 df.mm.trans2:exp4 0.0497881443966704 0.136623838292782 0.364417696200097 0.715631820605518 df.mm.trans1:exp5 0.0745445817211054 0.191311639764847 0.389650006725848 0.696887656967541 df.mm.trans2:exp5 0.122549598115726 0.136623838292782 0.896985472279765 0.369966805664663 df.mm.trans1:exp6 -0.0262675822670904 0.191311639764847 -0.137302582840111 0.890822372600323 df.mm.trans2:exp6 0.186102326020715 0.136623838292782 1.36215120542801 0.173491358328751 df.mm.trans1:exp7 0.0579764324605334 0.191311639764847 0.303047072994596 0.76192409840188 df.mm.trans2:exp7 -0.0373065166795183 0.136623838292782 -0.273060083406317 0.784869742548596 df.mm.trans1:exp8 -0.118394727619808 0.191311639764847 -0.61885794176107 0.536166723914924 df.mm.trans2:exp8 0.0105060406307246 0.136623838292782 0.0768975660617172 0.938722143766836 df.mm.trans1:probe2 -0.0788975699941911 0.138618452388183 -0.569170760709753 0.569382432165476 df.mm.trans1:probe3 -0.200164573601027 0.138618452388183 -1.4439965975128 0.149088326934589 df.mm.trans1:probe4 -0.169125144079792 0.138618452388183 -1.22007670094439 0.222755754204478 df.mm.trans1:probe5 -0.178418462294960 0.138618452388183 -1.28711913328337 0.198384056780835 df.mm.trans1:probe6 -0.045304914912003 0.138618452388183 -0.326831775506570 0.743871202868706 df.mm.trans1:probe7 -0.185065819447496 0.138618452388183 -1.33507347874035 0.182190267269322 df.mm.trans1:probe8 -0.110764804898056 0.138618452388183 -0.799062484032593 0.424465237648388 df.mm.trans1:probe9 -0.0476205228892478 0.138618452388183 -0.343536679776893 0.731275076014916 df.mm.trans1:probe10 -0.108904787699942 0.138618452388183 -0.785644232955136 0.432282951470747 df.mm.trans1:probe11 -0.149743644536224 0.138618452388183 -1.08025765658446 0.280317174324313 df.mm.trans1:probe12 -0.185538871102149 0.138618452388183 -1.33848609550603 0.181076426522558 df.mm.trans1:probe13 -0.0445037182342114 0.138618452388183 -0.321051905193577 0.748245676076157 df.mm.trans1:probe14 -0.108837747461797 0.138618452388183 -0.78516060154106 0.432566274575445 df.mm.trans1:probe15 -0.117240805498363 0.138618452388183 -0.845780655305868 0.397900173672918 df.mm.trans1:probe16 -0.108057821795145 0.138618452388183 -0.779534181297467 0.435870273618283 df.mm.trans1:probe17 0.00464759813985615 0.138618452388183 0.0335279903922252 0.97326098763893 df.mm.trans1:probe18 -0.0727721264326115 0.138618452388183 -0.524981524312668 0.599725471328905 df.mm.trans1:probe19 0.0181353149624518 0.138618452388183 0.130829010496136 0.895939842796054 df.mm.trans1:probe20 -0.123333553107317 0.138618452388183 -0.889734021571215 0.373846743735822 df.mm.trans2:probe2 0.0253389987809165 0.138618452388183 0.182796722545696 0.8549987343901 df.mm.trans2:probe3 0.0177408154137258 0.138618452388183 0.127983072297221 0.898190991937752 df.mm.trans2:probe4 0.0059634291837944 0.138618452388183 0.043020457096827 0.965694779460718 df.mm.trans2:probe5 0.202110012804279 0.138618452388183 1.45803108693131 0.145181216557700 df.mm.trans2:probe6 0.221452694520914 0.138618452388183 1.59757009767187 0.110490089456465 df.mm.trans3:probe2 0.046970782550479 0.138618452388183 0.338849422578628 0.73480229600095 df.mm.trans3:probe3 0.0761261116397806 0.138618452388183 0.549177330494204 0.58302013675234 df.mm.trans3:probe4 -0.130957895681674 0.138618452388183 -0.944736385563901 0.345047308676694 df.mm.trans3:probe5 -0.188834581326172 0.138618452388183 -1.36226150323309 0.173456571572406 df.mm.trans3:probe6 -0.0299498151726459 0.138618452388183 -0.216059367686311 0.828990484238946 df.mm.trans3:probe7 0.0310268241389697 0.138618452388183 0.223828960751076 0.822941248233664 df.mm.trans3:probe8 -0.0545179983433025 0.138618452388183 -0.393295390361391 0.69419457145212 df.mm.trans3:probe9 -0.116381222844923 0.138618452388183 -0.839579585833291 0.401367356308582 df.mm.trans3:probe10 0.0762167284552815 0.138618452388183 0.549831044440217 0.582571828784306 df.mm.trans3:probe11 0.0969572207833863 0.138618452388183 0.6994539263205 0.484449328841825 df.mm.trans3:probe12 0.0138771986455556 0.138618452388183 0.100110760194424 0.920278712885368 df.mm.trans3:probe13 0.148460686440975 0.138618452388183 1.07100233686948 0.284455819721642 df.mm.trans3:probe14 -0.0257735913728848 0.138618452388183 -0.185931893834085 0.852540114203505