fitVsDatCorrelation=0.883106712900663 cont.fitVsDatCorrelation=0.213472002150481 fstatistic=14591.4068008795,79,1313 cont.fstatistic=3352.46592676967,79,1313 residuals=-0.480339980473584,-0.094346279439712,-0.00628256204411062,0.0765743369983979,1.04169653288525 cont.residuals=-0.533037032350118,-0.214105150358154,-0.0488176580617417,0.141280180097502,1.13652926158516 predictedValues: Include Exclude Both Lung 59.581648867321 43.7118734322734 67.6123786979126 cerebhem 57.6532908609144 42.4453292125277 59.0382590269592 cortex 53.3960130026861 46.471500917135 57.9431092519538 heart 55.2590887265665 47.0434869806889 60.3196638695793 kidney 56.3225642287212 44.5947936942061 62.2785396009 liver 57.8270939418757 45.8659578133778 61.6801793901173 stomach 56.4701924027627 48.0316058166475 62.9325265978213 testicle 54.7578559570284 43.6565750708639 59.9963260173782 diffExp=15.8697754350476,15.2079616483867,6.9245120855511,8.21560174587754,11.7277705345150,11.9611361284979,8.4385865861152,11.1012808861646 diffExpScore=0.98894375550834 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=1,1,0,0,0,0,0,0 diffExp1.3Score=0.666666666666667 diffExp1.2=1,1,0,0,1,1,0,1 diffExp1.2Score=0.833333333333333 cont.predictedValues: Include Exclude Both Lung 60.6562367465492 62.2223769157068 57.6602976350636 cerebhem 61.1806647323511 60.77831809949 59.2345725559336 cortex 60.0787043742515 61.0845254810681 55.4319363667767 heart 60.7603232031432 53.5568889621979 57.5158835900677 kidney 57.8000582793182 67.3072290916854 59.8579214586619 liver 59.364281533111 58.307402418022 63.5213492798567 stomach 60.9281201976332 55.1629115955993 60.3617382907675 testicle 62.7779959424714 59.861475954812 61.0124434580111 cont.diffExp=-1.56614016915753,0.402346632861097,-1.00582110681660,7.2034342409453,-9.50717081236715,1.05687911508890,5.76520860203392,2.91651998765931 cont.diffExpScore=4.69629945920517 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=-0.393383834739824 cont.tran.correlation=-0.498332917772689 tran.covariance=-0.00058127347995752 cont.tran.covariance=-0.00083039331703342 tran.mean=50.8180544328498 cont.tran.mean=60.1142195954631 weightedLogRatios: wLogRatio Lung 1.21799973300318 cerebhem 1.19470669376833 cortex 0.542848802398578 heart 0.632824283250074 kidney 0.913916527884542 liver 0.913401421297103 stomach 0.639772983231269 testicle 0.881263251729377 cont.weightedLogRatios: wLogRatio Lung -0.104976204849089 cerebhem 0.0271216557447485 cortex -0.0681385170542423 heart 0.510302624320524 kidney -0.629384007603283 liver 0.0731967538987246 stomach 0.403579428709330 testicle 0.195795555425965 varWeightedLogRatios=0.063813499661209 cont.varWeightedLogRatios=0.122677815324759 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.26313449844349 0.0630636974716088 51.743469369403 0 *** df.mm.trans1 0.777284206128709 0.0535342289995969 14.5193873275837 2.07219709877300e-44 *** df.mm.trans2 0.500970673046815 0.0463757738594973 10.8024218542333 4.0478261600534e-26 *** df.mm.exp2 0.0733022059963877 0.0575357295970514 1.27402931204238 0.202878487088798 df.mm.exp3 0.105937360218597 0.0575357295970514 1.84124475279142 0.0658111715998693 . df.mm.exp4 0.112270799228228 0.0575357295970514 1.95132311720928 0.0512310310276417 . df.mm.exp5 0.0459191544933598 0.0575357295970513 0.798098065583809 0.42495790379222 df.mm.exp6 0.110041656495438 0.0575357295970514 1.91257949218876 0.0560192816573596 . df.mm.exp7 0.112332726428820 0.0575357295970514 1.95239944319011 0.0511030662109726 . df.mm.exp8 0.033815114393346 0.0575357295970513 0.587723743666214 0.556818796737153 df.mm.trans1:exp2 -0.106202499208271 0.0519358307650217 -2.04487918348266 0.0410658045011056 * df.mm.trans2:exp2 -0.102705098074543 0.0325973119937959 -3.15072292138966 0.00166545269137598 ** df.mm.trans1:exp3 -0.215548901659037 0.0519358307650217 -4.15029274556646 3.53427235124332e-05 *** df.mm.trans2:exp3 -0.0447178874702103 0.0325973119937959 -1.37182745248201 0.170351507058167 df.mm.trans1:exp4 -0.187585592269134 0.0519358307650217 -3.61187237223268 0.000315458602284598 *** df.mm.trans2:exp4 -0.0388181388469482 0.0325973119937959 -1.19083864504952 0.233932171729843 df.mm.trans1:exp5 -0.102171535798864 0.0519358307650217 -1.96726487848301 0.0493629445753134 * df.mm.trans2:exp5 -0.0259218040475522 0.0325973119937959 -0.795212932050527 0.426633374848837 df.mm.trans1:exp6 -0.139931859076106 0.0519358307650217 -2.69432214744409 0.00714312272175239 ** df.mm.trans2:exp6 -0.0619382428865054 0.0325973119937959 -1.90010277222533 0.057638525957424 . df.mm.trans1:exp7 -0.165967417330264 0.0519358307650217 -3.19562457913048 0.00142849759449518 ** df.mm.trans2:exp7 -0.0180932461460835 0.0325973119937959 -0.555053316958378 0.578952736027728 df.mm.trans1:exp8 -0.118241889938652 0.0519358307650217 -2.27669199080736 0.0229649656196616 * df.mm.trans2:exp8 -0.035080980269213 0.0325973119937958 -1.07619242580155 0.282038908362811 df.mm.trans1:probe2 0.0238804375328236 0.0410588793476284 0.581614450083694 0.560926242975409 df.mm.trans1:probe3 0.779565673719635 0.0410588793476284 18.9865307116489 3.21655352057343e-71 *** df.mm.trans1:probe4 -0.070963964738541 0.0410588793476284 -1.72834636176304 0.0841612456072356 . df.mm.trans1:probe5 -0.0290580566800558 0.0410588793476284 -0.707716750718726 0.479246773639441 df.mm.trans1:probe6 0.0219883613131169 0.0410588793476284 0.535532427150547 0.592372435144933 df.mm.trans1:probe7 0.24649225169259 0.0410588793476284 6.00338478811471 2.49693269849773e-09 *** df.mm.trans1:probe8 0.200577506706185 0.0410588793476284 4.88511888032742 1.16080632678806e-06 *** df.mm.trans1:probe9 0.350265042631284 0.0410588793476284 8.53079889652457 3.9484962549251e-17 *** df.mm.trans1:probe10 0.404423824010288 0.0410588793476284 9.84985051798906 3.92679980019066e-22 *** df.mm.trans1:probe11 -0.171444729962667 0.0410588793476284 -4.17558230245683 3.16818745662669e-05 *** df.mm.trans1:probe12 -0.120949200776833 0.0410588793476284 -2.94575016899040 0.00327851324374261 ** df.mm.trans1:probe13 -0.146555072721471 0.0410588793476284 -3.5693880361578 0.00037071769087563 *** df.mm.trans1:probe14 -0.171643295245823 0.0410588793476284 -4.18041841309380 3.10241966131817e-05 *** df.mm.trans1:probe15 -0.0930563036356943 0.0410588793476284 -2.26641119081272 0.0235883676847468 * df.mm.trans1:probe16 -0.187317980424658 0.0410588793476284 -4.56217956751121 5.53568567235035e-06 *** df.mm.trans1:probe17 0.100082476993393 0.0410588793476284 2.43753552419286 0.0149197444673065 * df.mm.trans1:probe18 0.181738235649149 0.0410588793476284 4.4262833895306 1.03817753715271e-05 *** df.mm.trans1:probe19 0.0230637548469755 0.0410588793476284 0.561723924603598 0.574399998136681 df.mm.trans1:probe20 0.145594112741955 0.0410588793476284 3.54598359856026 0.000404906840854893 *** df.mm.trans1:probe21 0.561613657941113 0.0410588793476284 13.6782510108511 6.47703055628901e-40 *** df.mm.trans1:probe22 0.39200696155594 0.0410588793476284 9.54743450830648 6.23773946911268e-21 *** df.mm.trans2:probe2 0.0637287720636496 0.0410588793476284 1.55213130694788 0.120871797561049 df.mm.trans2:probe3 0.0510463156168375 0.0410588793476284 1.24324668446622 0.213998890884235 df.mm.trans2:probe4 0.253994125115251 0.0410588793476284 6.1860949239454 8.22349692121144e-10 *** df.mm.trans2:probe5 0.119743762258633 0.0410588793476284 2.91639139112427 0.00360123106479074 ** df.mm.trans2:probe6 -0.00198748441224269 0.0410588793476284 -0.0484057150078425 0.961400266429107 df.mm.trans3:probe2 0.0493035568911641 0.0410588793476284 1.20080132907992 0.230044856926269 df.mm.trans3:probe3 -0.520667027551684 0.0410588793476284 -12.6809848642827 7.59612964645206e-35 *** df.mm.trans3:probe4 -0.544898319669025 0.0410588793476284 -13.2711444717134 8.23518708855754e-38 *** df.mm.trans3:probe5 0.103293271921770 0.0410588793476284 2.51573529436175 0.0119969712268180 * df.mm.trans3:probe6 0.0462842512174405 0.0410588793476284 1.12726533097923 0.259836276104115 df.mm.trans3:probe7 -0.313248889879143 0.0410588793476284 -7.62926058519512 4.51424572248383e-14 *** df.mm.trans3:probe8 -0.322657803892089 0.0410588793476284 -7.85841720521107 8.04784555980471e-15 *** df.mm.trans3:probe9 -0.182781777546587 0.0410588793476284 -4.45169913185039 9.24173967554107e-06 *** df.mm.trans3:probe10 -0.587530004388768 0.0410588793476284 -14.3094505676688 2.86085662212012e-43 *** df.mm.trans3:probe11 -0.560282727161358 0.0410588793476284 -13.6458358353543 9.56444686971526e-40 *** df.mm.trans3:probe12 -0.616696335515117 0.0410588793476284 -15.0198043715175 3.56031534020296e-47 *** df.mm.trans3:probe13 -0.572203372937493 0.0410588793476284 -13.9361663549773 2.84384459552965e-41 *** df.mm.trans3:probe14 -0.409918882894856 0.0410588793476284 -9.9836841484212 1.12841728509358e-22 *** df.mm.trans3:probe15 -0.40239452553536 0.0410588793476284 -9.80042641028883 6.20126558292567e-22 *** df.mm.trans3:probe16 -0.479513049440452 0.0410588793476284 -11.6786687084325 4.73384535728478e-30 *** df.mm.trans3:probe17 -0.56637159102593 0.0410588793476284 -13.7941317450654 1.59874110577763e-40 *** df.mm.trans3:probe18 0.474010417763839 0.0410588793476284 11.5446506406225 1.96148743795078e-29 *** df.mm.trans3:probe19 -0.301158173993358 0.0410588793476284 -7.33478796251542 3.873799675034e-13 *** df.mm.trans3:probe20 -0.263328383970705 0.0410588793476284 -6.41343329761178 1.98068066758336e-10 *** df.mm.trans3:probe21 -0.47632731175387 0.0410588793476284 -11.6010792140965 1.07977803732422e-29 *** df.mm.trans3:probe22 -0.509915819308701 0.0410588793476284 -12.4191363088957 1.45505770749850e-33 *** df.mm.trans3:probe23 -0.613678833006037 0.0410588793476284 -14.9463122899744 9.15547284453016e-47 *** df.mm.trans3:probe24 -0.285142069546035 0.0410588793476284 -6.94471145039921 5.94879979094035e-12 *** df.mm.trans3:probe25 -0.408262816090383 0.0410588793476284 -9.94335019798743 1.64562744421635e-22 *** df.mm.trans3:probe26 -0.454036475393248 0.0410588793476284 -11.0581799261765 3.0567674849056e-27 *** df.mm.trans3:probe27 -0.308249871263122 0.0410588793476284 -7.5075081483179 1.10793520997957e-13 *** df.mm.trans3:probe28 -0.231300134288428 0.0410588793476284 -5.6333767010567 2.15950396244696e-08 *** df.mm.trans3:probe29 -0.623017338592549 0.0410588793476284 -15.1737540939128 4.87174531608553e-48 *** df.mm.trans3:probe30 0.0527412018228138 0.0410588793476284 1.28452609181746 0.199184521052951 cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.169508903543 0.131316455680344 31.7516101233541 1.19731752812481e-164 *** df.mm.trans1 -0.0532557761182587 0.111473406914839 -0.477744222520658 0.632911785958533 df.mm.trans2 -0.039248880357039 0.0965674785466553 -0.406439941766486 0.684485612566123 df.mm.exp2 -0.0418093485960645 0.119805662981764 -0.348976396903947 0.727162983364046 df.mm.exp3 0.0113898141842600 0.119805662981764 0.0950690802152964 0.924274463568303 df.mm.exp4 -0.145748015221145 0.119805662981764 -1.2165369448632 0.223999084919505 df.mm.exp5 -0.00708464797637515 0.119805662981764 -0.0591344999898173 0.952853978221868 df.mm.exp6 -0.183322577875575 0.119805662981764 -1.53016621512691 0.126216467339509 df.mm.exp7 -0.161738084486225 0.119805662981764 -1.35000366811412 0.177247480746724 df.mm.exp8 -0.0608083468990398 0.119805662981764 -0.507558202055072 0.61184845234814 df.mm.trans1:exp2 0.0504180905819684 0.10814508968408 0.466207857696108 0.641144058229916 df.mm.trans2:exp2 0.0183277712267172 0.0678768237092148 0.270015157238848 0.787191024488138 df.mm.trans1:exp3 -0.0209568338383066 0.10814508968408 -0.193784423310637 0.846374658394496 df.mm.trans2:exp3 -0.0298459380679598 0.0678768237092148 -0.439707346882054 0.660221442971991 df.mm.trans1:exp4 0.147462550407038 0.10814508968408 1.36356214450249 0.172939148887699 df.mm.trans2:exp4 -0.004222243275187 0.0678768237092148 -0.0622044910833652 0.95040945349097 df.mm.trans1:exp5 -0.0411480299213660 0.10814508968408 -0.3804891192154 0.703643916979294 df.mm.trans2:exp5 0.0856376022472102 0.0678768237092148 1.26166189823618 0.207294559927021 df.mm.trans1:exp6 0.161792840518531 0.10814508968408 1.49607199911868 0.134875210194972 df.mm.trans2:exp6 0.118336941786301 0.0678768237092148 1.74340717964733 0.0814965769640236 . df.mm.trans1:exp7 0.166210434566443 0.10814508968408 1.53692077053139 0.12455364361149 df.mm.trans2:exp7 0.0413142280298577 0.0678768237092148 0.608664721950579 0.542851978389726 df.mm.trans1:exp8 0.0951905140247638 0.10814508968408 0.880211152469706 0.378906008667247 df.mm.trans2:exp8 0.0221268132637999 0.0678768237092148 0.325984806811106 0.744487796203125 df.mm.trans1:probe2 -0.0727600980636588 0.085496200291218 -0.851033119785706 0.394906129551874 df.mm.trans1:probe3 -0.00733256807453822 0.085496200291218 -0.0857648415901754 0.931666431618809 df.mm.trans1:probe4 -0.034392550196298 0.085496200291218 -0.402269926372748 0.687550861360865 df.mm.trans1:probe5 -0.071649430667821 0.085496200291218 -0.838042280519696 0.402159483685939 df.mm.trans1:probe6 -0.106091226338996 0.085496200291218 -1.24088820295671 0.214868715444654 df.mm.trans1:probe7 -0.00644459975647719 0.085496200291218 -0.0753787856597782 0.93992482062415 df.mm.trans1:probe8 -0.00410266826418033 0.085496200291218 -0.0479865567148689 0.961734254258538 df.mm.trans1:probe9 -0.0224562867765296 0.085496200291218 -0.262658301772930 0.792855164420972 df.mm.trans1:probe10 -0.0373742507492391 0.085496200291218 -0.437145166942327 0.66207795877765 df.mm.trans1:probe11 -0.0641717663945016 0.085496200291218 -0.750580331943632 0.453039746513949 df.mm.trans1:probe12 0.107344215572924 0.085496200291218 1.25554369910343 0.209504843853361 df.mm.trans1:probe13 -0.0469915737040906 0.085496200291218 -0.549633475453032 0.582664264975748 df.mm.trans1:probe14 0.00166513130686187 0.085496200291218 0.0194760855007600 0.984464273518982 df.mm.trans1:probe15 -0.0381285476444049 0.085496200291218 -0.445967744935227 0.655694074752709 df.mm.trans1:probe16 0.0284539536745204 0.085496200291218 0.332809570221838 0.739331163142074 df.mm.trans1:probe17 -0.100847364644201 0.085496200291218 -1.17955376146184 0.238391420307904 df.mm.trans1:probe18 0.00337436826935698 0.085496200291218 0.0394680495491399 0.968523226510195 df.mm.trans1:probe19 -0.0590685890866596 0.085496200291218 -0.690891395003048 0.489755914981784 df.mm.trans1:probe20 0.0789045891829995 0.085496200291218 0.922901706909008 0.356227989655721 df.mm.trans1:probe21 -0.121867959527939 0.085496200291218 -1.42541959891588 0.154273619361936 df.mm.trans1:probe22 0.000342612946517271 0.085496200291218 0.00400734705577862 0.996803216953835 df.mm.trans2:probe2 -0.0258793682241429 0.085496200291218 -0.302696121418173 0.762169400176758 df.mm.trans2:probe3 0.055834918617084 0.085496200291218 0.653069006890348 0.513826125326933 df.mm.trans2:probe4 0.0554095791675926 0.085496200291218 0.648094055394929 0.517037432443517 df.mm.trans2:probe5 -0.00204559561036248 0.085496200291218 -0.023926158161354 0.980915144616174 df.mm.trans2:probe6 -0.066951437378482 0.085496200291218 -0.783092548562759 0.433713986273804 df.mm.trans3:probe2 -0.0328568380057085 0.085496200291218 -0.384307582018747 0.700812719388741 df.mm.trans3:probe3 0.0497771520280534 0.085496200291218 0.582214786838502 0.560521970306612 df.mm.trans3:probe4 -0.0425886373173886 0.085496200291218 -0.498134854792644 0.618472419232011 df.mm.trans3:probe5 -0.0495137404339388 0.085496200291218 -0.579133812558741 0.562598225307733 df.mm.trans3:probe6 -0.0872484555278892 0.085496200291218 -1.02049512411900 0.307681689960611 df.mm.trans3:probe7 0.00743056077742361 0.085496200291218 0.086911006010952 0.930755502941701 df.mm.trans3:probe8 -0.029871666141616 0.085496200291218 -0.349391739514351 0.726851260783127 df.mm.trans3:probe9 0.0439276899171352 0.085496200291218 0.513796984749126 0.607480387992584 df.mm.trans3:probe10 -0.0291449408857155 0.085496200291218 -0.34089165116627 0.733239687923622 df.mm.trans3:probe11 -0.0993489677843335 0.085496200291218 -1.16202787312103 0.245435322840135 df.mm.trans3:probe12 0.0246690367378799 0.085496200291218 0.288539568470318 0.772979290259828 df.mm.trans3:probe13 0.0274337737054945 0.085496200291218 0.320877110468645 0.748354584310865 df.mm.trans3:probe14 0.0345466443351635 0.085496200291218 0.404072277101092 0.686225374850321 df.mm.trans3:probe15 -0.0347224297028694 0.085496200291218 -0.406128337687494 0.684714484035389 df.mm.trans3:probe16 -0.101098246705666 0.085496200291218 -1.18248818498722 0.237226137941939 df.mm.trans3:probe17 0.0516771946023499 0.085496200291218 0.604438494650365 0.545656577857697 df.mm.trans3:probe18 0.0140524755446594 0.085496200291218 0.164363743614263 0.869470101981723 df.mm.trans3:probe19 -0.100946614054149 0.085496200291218 -1.18071462486407 0.237929949770858 df.mm.trans3:probe20 -0.0114279792883424 0.085496200291218 -0.133666516750643 0.893686766920628 df.mm.trans3:probe21 -0.0404634391263117 0.085496200291218 -0.473277630917921 0.636093791046137 df.mm.trans3:probe22 0.0623032776678981 0.085496200291218 0.728725691383712 0.466299427442171 df.mm.trans3:probe23 -0.00477909841730996 0.085496200291218 -0.0558983721034543 0.955431272189564 df.mm.trans3:probe24 -0.0653471387419014 0.085496200291218 -0.764327987902566 0.444809145427278 df.mm.trans3:probe25 -0.0964881509610259 0.085496200291218 -1.12856654017801 0.259286894061777 df.mm.trans3:probe26 -0.0302460122627715 0.085496200291218 -0.353770251306459 0.72356786666864 df.mm.trans3:probe27 -0.0136575193953096 0.085496200291218 -0.159744168147698 0.873107176214836 df.mm.trans3:probe28 -0.00283554403900748 0.085496200291218 -0.0331657316857243 0.973547466063703 df.mm.trans3:probe29 -0.0370072729947004 0.085496200291218 -0.432852838706818 0.665192773331287 df.mm.trans3:probe30 -0.0792869027001504 0.085496200291218 -0.927373408760654 0.353903126836749