chr7.21125_chr7_34726540_34726915_+_0.R fitVsDatCorrelation=0.83461115123489 cont.fitVsDatCorrelation=0.311231595341287 fstatistic=8012.5612106518,37,347 cont.fstatistic=2685.73486406832,37,347 residuals=-0.437422931520702,-0.0801420923446677,-0.0158110549230878,0.0701196748873248,0.703372534205602 cont.residuals=-0.450480285001141,-0.184764092003228,-0.0379174879548819,0.143310671788561,0.988891010870775 predictedValues: Include Exclude Both chr7.21125_chr7_34726540_34726915_+_0.R.tl.Lung 66.1530804587236 54.0652076098535 77.8100165721381 chr7.21125_chr7_34726540_34726915_+_0.R.tl.cerebhem 68.1869971782036 64.5800944321556 70.4094419316936 chr7.21125_chr7_34726540_34726915_+_0.R.tl.cortex 66.6790527869694 48.4452798084017 71.8074462422434 chr7.21125_chr7_34726540_34726915_+_0.R.tl.heart 69.6320878642272 47.5049200683852 83.8372928813864 chr7.21125_chr7_34726540_34726915_+_0.R.tl.kidney 62.7887115684755 50.1699655922027 74.9456180446331 chr7.21125_chr7_34726540_34726915_+_0.R.tl.liver 63.1604823152438 47.5691892775723 70.255214101115 chr7.21125_chr7_34726540_34726915_+_0.R.tl.stomach 76.901421788026 51.7221373410205 79.2121829433523 chr7.21125_chr7_34726540_34726915_+_0.R.tl.testicle 69.9984010222009 53.7400017656291 72.5464009119472 diffExp=12.0878728488701,3.60690274604792,18.2337729785677,22.1271677958419,12.6187459762728,15.5912930376715,25.1792844470055,16.2583992565718 diffExpScore=0.992107554402572 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,1,0,0,1,0 diffExp1.4Score=0.666666666666667 diffExp1.3=0,0,1,1,0,1,1,1 diffExp1.3Score=0.833333333333333 diffExp1.2=1,0,1,1,1,1,1,1 diffExp1.2Score=0.875 cont.predictedValues: Include Exclude Both Lung 65.505619488339 62.4417137485877 61.126190163949 cerebhem 68.9715734993962 69.743667572791 61.1002743962629 cortex 65.2454303987069 63.4376288439244 57.434329713037 heart 67.7575024714136 59.8301917893508 66.6125442229048 kidney 58.8291574204351 65.1741793367641 53.3783564049501 liver 64.033970822715 62.2749755578746 62.4284378408943 stomach 62.3866432099113 66.8932306325562 68.2019186886172 testicle 62.8481031432257 66.8069289986149 63.9603596307211 cont.diffExp=3.06390573975127,-0.77209407339474,1.80780155478249,7.92731068206277,-6.34502191632904,1.75899526484043,-4.50658742264483,-3.95882585538918 cont.diffExpScore=14.8877766919778 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.158209374565823 cont.tran.correlation=-0.0875259263278078 tran.covariance=0.00121213933993498 cont.tran.covariance=-0.000283222742135216 tran.mean=60.0810644298307 cont.tran.mean=64.5112823084129 weightedLogRatios: wLogRatio Lung 0.825500774102058 cerebhem 0.227992792584545 cortex 1.29065404226976 heart 1.54946446350555 kidney 0.903626398396802 liver 1.13508894265200 stomach 1.64375124866758 testicle 1.08800282917069 cont.weightedLogRatios: wLogRatio Lung 0.199186991460240 cerebhem -0.0471922437838748 cortex 0.117006445650215 heart 0.516826038544995 kidney -0.422593378225699 liver 0.115468668434255 stomach -0.290719379049193 testicle -0.254806022731082 varWeightedLogRatios=0.201058230043638 cont.varWeightedLogRatios=0.094786587001527 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.54445769773012 0.081039021340201 43.7376666094045 3.00147328626798e-143 *** df.mm.trans1 0.646746852936079 0.0675166259094642 9.57907543844575 1.93939545435066e-19 *** df.mm.trans2 0.458143915025729 0.0675166259094642 6.78564588876336 5.00728160335478e-11 *** df.mm.exp2 0.307940591480152 0.0930237271272662 3.3103445861598 0.00102968581744449 ** df.mm.exp3 -0.021554569785006 0.0930237271272661 -0.231710451200446 0.816899493391368 df.mm.exp4 -0.152711304294486 0.093023727127266 -1.64163820361187 0.101570968009141 df.mm.exp5 -0.0894630529387138 0.0930237271272661 -0.961722946408276 0.336858468454622 df.mm.exp6 -0.0721625872454883 0.093023727127266 -0.775743882490995 0.438428595901174 df.mm.exp7 0.088387978339252 0.093023727127266 0.950165953018934 0.34268923893639 df.mm.exp8 0.120511512530577 0.093023727127266 1.29549219593949 0.196011637306169 df.mm.trans1:exp2 -0.277658159277101 0.0786193987723135 -3.53167492518247 0.000468710935754006 *** df.mm.trans2:exp2 -0.130225230295124 0.0786193987723135 -1.65640073987674 0.0985446082289756 . df.mm.trans1:exp3 0.0294739649544378 0.0786193987723135 0.374894306172401 0.707968095812988 df.mm.trans2:exp3 -0.0882013869942558 0.0786193987723135 -1.12187816711359 0.262689957922636 df.mm.trans1:exp4 0.203965340666139 0.0786193987723135 2.59433859646822 0.00987910784375281 ** df.mm.trans2:exp4 0.0233537239632462 0.0786193987723135 0.297047857499903 0.766607706842814 df.mm.trans1:exp5 0.0372669009033073 0.0786193987723135 0.474016610216449 0.635786181756637 df.mm.trans2:exp5 0.0146887392156811 0.0786193987723135 0.186833522579085 0.851900348160985 df.mm.trans1:exp6 0.0258699557493769 0.0786193987723135 0.329053085540604 0.742314073379126 df.mm.trans2:exp6 -0.0558430115753539 0.0786193987723135 -0.710295581591493 0.477997940382216 df.mm.trans1:exp7 0.0621649295345285 0.0786193987723135 0.790707261887895 0.429654910320269 df.mm.trans2:exp7 -0.132692966451860 0.0786193987723135 -1.68778912741558 0.0923502547431457 . df.mm.trans1:exp8 -0.0640105705399769 0.0786193987723135 -0.814182905740037 0.41609854939565 df.mm.trans2:exp8 -0.126544742883023 0.0786193987723135 -1.60958675414835 0.108397421084809 df.mm.trans1:probe2 -0.0198695927387621 0.0430616181650901 -0.461422342806206 0.644784730899916 df.mm.trans1:probe3 0.0283214028571123 0.0430616181650901 0.657694811851552 0.511170302109009 df.mm.trans1:probe4 -0.0203916208607896 0.0430616181650901 -0.473545159929012 0.636122070715866 df.mm.trans1:probe5 0.0528417002506136 0.0430616181650901 1.22711831329767 0.220610015423756 df.mm.trans1:probe6 -0.0332328235914298 0.0430616181650901 -0.771750459168104 0.440787484176533 df.mm.trans2:probe2 -0.0480874666384104 0.0430616181650901 -1.11671294966325 0.264889722910058 df.mm.trans2:probe3 0.0159732221475169 0.0430616181650901 0.370938734496196 0.710909517352109 df.mm.trans2:probe4 -0.0466499240665819 0.0430616181650901 -1.08332956480490 0.279414341853226 df.mm.trans2:probe5 -0.0673739513099894 0.0430616181650901 -1.56459404409027 0.118589605775824 df.mm.trans2:probe6 0.0220306562570963 0.0430616181650901 0.511607719260223 0.609250987931545 df.mm.trans3:probe2 -0.121863248563640 0.0430616181650901 -2.82997373894402 0.00492615795056696 ** df.mm.trans3:probe3 -0.613133324030872 0.0430616181650901 -14.2385110025414 1.50139270484304e-36 *** df.mm.trans3:probe4 -0.445316607729503 0.0430616181650901 -10.3413811813166 4.9966345578186e-22 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.23394109093349 0.139812297442642 30.2830378184042 1.95436508281793e-99 *** df.mm.trans1 -0.000343350137119976 0.116482830466943 -0.00294764589548172 0.997649816090724 df.mm.trans2 -0.089833951329773 0.116482830466943 -0.77122053928169 0.441101052453961 df.mm.exp2 0.162575657747417 0.160488870562022 1.01300269095350 0.311764691224399 df.mm.exp3 0.0741419529634978 0.160488870562022 0.46197566662322 0.644388271258434 df.mm.exp4 -0.0948763630052925 0.160488870562022 -0.591170980723096 0.554790748419133 df.mm.exp5 0.0708665658302075 0.160488870562022 0.44156685496033 0.659077705626601 df.mm.exp6 -0.0464765565675411 0.160488870562022 -0.289593642255585 0.772300087694987 df.mm.exp7 -0.0894527764051818 0.160488870562022 -0.557376820535429 0.577629356541703 df.mm.exp8 -0.0191650098047774 0.160488870562022 -0.119416441387261 0.90501454107979 df.mm.trans1:exp2 -0.111017148982374 0.135637851792067 -0.818482064671474 0.413643693141447 df.mm.trans2:exp2 -0.0519825702507065 0.135637851792067 -0.383245307736043 0.701772565718824 df.mm.trans1:exp3 -0.078121874093025 0.135637851792067 -0.575959240439652 0.565016081499458 df.mm.trans2:exp3 -0.0583182942886857 0.135637851792067 -0.429955897400142 0.667494603571286 df.mm.trans1:exp4 0.128675621543355 0.135637851792067 0.948670447395572 0.343448463478902 df.mm.trans2:exp4 0.0521532343772651 0.135637851792067 0.384503541512999 0.700840805087912 df.mm.trans1:exp5 -0.178364892009795 0.135637851792067 -1.31500823445087 0.189375484116519 df.mm.trans2:exp5 -0.0280367393739281 0.135637851792067 -0.206702915178194 0.836363115488343 df.mm.trans1:exp6 0.0237543605345382 0.135637851792067 0.175130763431388 0.861079029991803 df.mm.trans2:exp6 0.0438026836322844 0.135637851792067 0.322938494332938 0.746936330354376 df.mm.trans1:exp7 0.0406680450689013 0.135637851792067 0.299828141861502 0.764487770886654 df.mm.trans2:exp7 0.158317010463816 0.135637851792067 1.16720375892207 0.243929539372328 df.mm.trans1:exp8 -0.0222501689871349 0.135637851792067 -0.164041001041836 0.869794373073581 df.mm.trans2:exp8 0.0867382708957615 0.135637851792067 0.639484257158034 0.522929890982404 df.mm.trans1:probe2 0.0299579253288405 0.0742919110780577 0.403246125912201 0.687015520439809 df.mm.trans1:probe3 -0.150036569342606 0.0742919110780577 -2.01955458091480 0.0441979274020799 * df.mm.trans1:probe4 -0.155930348055502 0.0742919110780577 -2.09888729193771 0.0365490583286280 * df.mm.trans1:probe5 -0.140252968728719 0.0742919110780577 -1.88786325043324 0.0598784614516715 . df.mm.trans1:probe6 -0.0983561204033699 0.0742919110780577 -1.32391425898343 0.186402983001730 df.mm.trans2:probe2 0.000288010983730729 0.0742919110780577 0.00387674754292051 0.996909038478412 df.mm.trans2:probe3 -0.0419148080958246 0.0742919110780577 -0.564190737424767 0.572988805879732 df.mm.trans2:probe4 -0.0168542298855267 0.0742919110780577 -0.226864939142812 0.82066235602245 df.mm.trans2:probe5 0.0350765893028179 0.0742919110780577 0.472145470399373 0.637119734612457 df.mm.trans2:probe6 -0.0753315423777404 0.0742919110780577 -1.01399386938089 0.311292174031567 df.mm.trans3:probe2 0.00249380883142024 0.0742919110780577 0.0335677033371779 0.973241176846409 df.mm.trans3:probe3 -0.118416494044330 0.0742919110780577 -1.59393522559827 0.11186095516957 df.mm.trans3:probe4 -0.00737079829216703 0.0742919110780577 -0.0992140084325279 0.921025643044532