fitVsDatCorrelation=0.827702654791129 cont.fitVsDatCorrelation=0.234834269411556 fstatistic=3847.63202350159,60,876 cont.fstatistic=1272.6363767038,60,876 residuals=-0.762136955080988,-0.128864397131117,-0.00809439028739342,0.130381754419390,1.554658809572 cont.residuals=-0.839435444088237,-0.344340485029305,-0.115938083088172,0.28893842627087,2.19988285422678 predictedValues: Include Exclude Both Lung 69.1747024336443 49.2274427673123 67.8681376319968 cerebhem 134.552516058073 54.6549021081784 136.943895091792 cortex 115.754318472671 46.1228428488792 128.991386671334 heart 63.3519629519259 48.6900134321893 59.4872797262844 kidney 72.305787503319 50.3391841066182 68.456901446734 liver 71.7408452230827 51.0287361940601 63.5452236919164 stomach 65.1955866068564 48.1187483329227 67.1195877829086 testicle 66.713691037917 50.8953351795663 63.6002152829835 diffExp=19.947259666332,79.8976139498948,69.6314756237918,14.6619495197367,21.9666033967007,20.7121090290226,17.0768382739337,15.8183558583507 diffExpScore=0.996164352954703 diffExp1.5=0,1,1,0,0,0,0,0 diffExp1.5Score=0.666666666666667 diffExp1.4=1,1,1,0,1,1,0,0 diffExp1.4Score=0.833333333333333 diffExp1.3=1,1,1,1,1,1,1,1 diffExp1.3Score=0.888888888888889 diffExp1.2=1,1,1,1,1,1,1,1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 67.256759795243 61.5376314564145 73.2243958649045 cerebhem 82.8162267319485 68.92719726109 79.7244937054746 cortex 75.3428174006184 63.9125692481984 66.3863804826815 heart 84.098085563091 65.7557462127784 82.64269743087 kidney 76.0925698426146 66.3514603541737 72.1600985648732 liver 74.6417100712302 75.4033407694633 69.9159939969667 stomach 74.6554314470185 70.9066337245235 77.3678047694821 testicle 77.5286236536458 63.2587173088133 68.5259499400661 cont.diffExp=5.71912833882856,13.8890294708585,11.4302481524200,18.3423393503127,9.7411094884409,-0.761630698233063,3.748797722495,14.2699063448324 cont.diffExpScore=1.00676232417328 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,1,0,1,0,0,0,1 cont.diffExp1.2Score=0.75 tran.correlation=0.319531998612991 cont.tran.correlation=0.181859586240733 tran.covariance=0.00376431350426075 cont.tran.covariance=0.00101716887082251 tran.mean=66.116663453576 cont.tran.mean=71.7803450525541 weightedLogRatios: wLogRatio Lung 1.38337284737397 cerebhem 4.01042315419592 cortex 3.9487718104956 heart 1.05742639683747 kidney 1.48463711054697 liver 1.39768062246998 stomach 1.22263411282269 testicle 1.10017177483422 cont.weightedLogRatios: wLogRatio Lung 0.370056451134642 cerebhem 0.793924167106428 cortex 0.697582211449865 heart 1.06016381120670 kidney 0.584029194139812 liver -0.0438345498706359 stomach 0.220869550874218 testicle 0.864295019776157 varWeightedLogRatios=1.59015306824351 cont.varWeightedLogRatios=0.133161099003888 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.64211423461441 0.127431898552806 28.5808677103338 1.85514789733579e-127 *** df.mm.trans1 0.53713387911992 0.109813735263627 4.89131781038533 1.19164179875188e-06 *** df.mm.trans2 0.241876932056164 0.0967914752149787 2.49894870926332 0.0126383421581721 * df.mm.exp2 0.0679023686603736 0.123992321841963 0.547633657081765 0.584082974033724 df.mm.exp3 -0.192487099213130 0.123992321841963 -1.55241144252842 0.120924993175824 df.mm.exp4 0.0328975328707012 0.123992321841963 0.265319113167599 0.79082606368518 df.mm.exp5 0.0579637833197386 0.123992321841963 0.467478812064004 0.640273612177639 df.mm.exp6 0.138177544354674 0.123992321841963 1.11440403971781 0.265411543862215 df.mm.exp7 -0.0709320664070784 0.123992321841963 -0.572068216429451 0.567422529598321 df.mm.exp8 0.0620448103691813 0.123992321841963 0.500392358554763 0.616924518076381 df.mm.trans1:exp2 0.597416984119749 0.114315272358495 5.2260469821236 2.16582505502383e-07 *** df.mm.trans2:exp2 0.0366852941771866 0.0831765780979985 0.441053178864416 0.659283328667029 df.mm.trans1:exp3 0.707321876084883 0.114315272358495 6.18746613196799 9.37657418170947e-10 *** df.mm.trans2:exp3 0.127344185155874 0.0831765780979985 1.53101014814336 0.126127910090766 df.mm.trans1:exp4 -0.120826864777820 0.114315272358495 -1.05696170148556 0.290820455161400 df.mm.trans2:exp4 -0.0438748346248458 0.0831765780979985 -0.527490257812151 0.597986749009487 df.mm.trans1:exp5 -0.0136948329212453 0.114315272358495 -0.119798804120399 0.904669997982475 df.mm.trans2:exp5 -0.0356312492198295 0.0831765780979985 -0.428380801838817 0.66847920653343 df.mm.trans1:exp6 -0.101752514583064 0.114315272358495 -0.890104292136626 0.373654269664139 df.mm.trans2:exp6 -0.102239863346238 0.0831765780979985 -1.22919054479230 0.219330440968137 df.mm.trans1:exp7 0.0116886189518897 0.114315272358495 0.102248970856965 0.918582458460844 df.mm.trans2:exp7 0.0481526979858966 0.0831765780979985 0.578921363285265 0.562791056131487 df.mm.trans1:exp8 -0.0982698395917005 0.114315272358495 -0.859638765356955 0.390223383506249 df.mm.trans2:exp8 -0.0287247855997344 0.0831765780979985 -0.345347046687721 0.729916389942156 df.mm.trans1:probe2 -0.0725866929346137 0.0796355106014359 -0.911486501265741 0.362289847453907 df.mm.trans1:probe3 0.293632641510527 0.0796355106014359 3.68720736883468 0.000240684821000258 *** df.mm.trans1:probe4 -0.094397803119838 0.0796355106014359 -1.18537323873373 0.236191360384007 df.mm.trans1:probe5 0.253630891116025 0.0796355106014359 3.18489690341047 0.00149924743810904 ** df.mm.trans1:probe6 -0.185154838264847 0.0796355106014359 -2.32502858167785 0.0202980979615414 * df.mm.trans1:probe7 0.26307109830492 0.0796355106014358 3.30343958766778 0.000993780524722315 *** df.mm.trans1:probe8 0.661013769350644 0.0796355106014359 8.30049012505139 3.90164700656553e-16 *** df.mm.trans1:probe9 0.466112788471499 0.0796355106014359 5.85307716308024 6.81649755863261e-09 *** df.mm.trans1:probe10 0.244875911040187 0.0796355106014359 3.07495876137161 0.00217063059581653 ** df.mm.trans1:probe11 0.480005176676085 0.0796355106014359 6.02752682880934 2.45084065724017e-09 *** df.mm.trans1:probe12 0.288081252102528 0.0796355106014359 3.61749739440151 0.000314482829347379 *** df.mm.trans1:probe13 0.140350824242197 0.0796355106014359 1.76241507315288 0.078347892822823 . df.mm.trans1:probe14 0.0462030093054651 0.0796355106014359 0.580180989065349 0.561941771911242 df.mm.trans1:probe15 -0.144813527885086 0.0796355106014359 -1.81845418948661 0.0693361178811276 . df.mm.trans1:probe16 0.0161208490457388 0.0796355106014359 0.202432921243154 0.839625297897073 df.mm.trans1:probe17 -0.0713821151601932 0.0796355106014359 -0.89636036262077 0.370306582941013 df.mm.trans1:probe18 -0.183921848955876 0.0796355106014359 -2.30954567336647 0.0211450878916582 * df.mm.trans1:probe19 0.229821235235022 0.0796355106014359 2.88591400368165 0.00399864247443378 ** df.mm.trans1:probe20 -0.0424271375953666 0.0796355106014359 -0.532766567011898 0.594330296749651 df.mm.trans1:probe21 -0.335326024199239 0.0796355106014359 -4.21076001982956 2.80816428167269e-05 *** df.mm.trans1:probe22 -0.359134818930304 0.0796355106014358 -4.50973210591593 7.37376466690435e-06 *** df.mm.trans2:probe2 0.121318870602743 0.0796355106014359 1.52342679398298 0.128012865565416 df.mm.trans2:probe3 0.00516970083632937 0.0796355106014359 0.0649170300697006 0.948254872134195 df.mm.trans2:probe4 -0.0337894426703367 0.0796355106014359 -0.42430119949187 0.671450343145708 df.mm.trans2:probe5 0.105650584754442 0.0796355106014359 1.32667680481397 0.184961348173796 df.mm.trans2:probe6 0.0134716660228070 0.0796355106014359 0.169166568043128 0.865704679712988 df.mm.trans3:probe2 -0.235242118216072 0.0796355106014359 -2.95398518122681 0.00322091288067602 ** df.mm.trans3:probe3 -0.206210117305845 0.0796355106014359 -2.58942418713050 0.00977318722426292 ** df.mm.trans3:probe4 -0.667585495463883 0.0796355106014359 -8.3830126839401 2.0437271321105e-16 *** df.mm.trans3:probe5 0.0747273058948748 0.0796355106014359 0.93836663230395 0.348314673614363 df.mm.trans3:probe6 -0.161452653292092 0.0796355106014359 -2.02739521694209 0.0429243426649538 * df.mm.trans3:probe7 -0.542936513284722 0.0796355106014359 -6.81776897246306 1.72097740855763e-11 *** df.mm.trans3:probe8 -0.438383140394313 0.0796355106014359 -5.50487008978138 4.85389437491721e-08 *** df.mm.trans3:probe9 -0.0495603351941645 0.0796355106014359 -0.622339642451805 0.533880511606366 df.mm.trans3:probe10 0.278589312530669 0.0796355106014359 3.49830509563715 0.000491797213285028 *** df.mm.trans3:probe11 -0.291088377703003 0.0796355106014359 -3.65525850847944 0.000272217931943357 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.11373653126646 0.220733465450264 18.6366689929642 1.50012936115364e-65 *** df.mm.trans1 0.109720897287728 0.190215845593274 0.576823118733948 0.564207142928713 df.mm.trans2 -0.0436411361506115 0.167659102570713 -0.260296849270114 0.794695972755668 df.mm.exp2 0.236460220437990 0.214775540506128 1.10096438300544 0.271214584478248 df.mm.exp3 0.249434949209252 0.214775540506128 1.16137502725612 0.245805774268182 df.mm.exp4 0.168766630166111 0.214775540506128 0.78578142449743 0.432208035872399 df.mm.exp5 0.213391382234226 0.214775540506128 0.993555326325144 0.320713760920587 df.mm.exp6 0.353618843078182 0.214775540506128 1.64645770298081 0.100028237995838 df.mm.exp7 0.191038769016976 0.214775540506128 0.889481030133993 0.373988808118470 df.mm.exp8 0.236029872212853 0.214775540506128 1.09896067148353 0.272087159202840 df.mm.trans1:exp2 -0.0283537340556364 0.198013264403536 -0.143191084400556 0.886172200845095 df.mm.trans2:exp2 -0.123058266303680 0.144075812542789 -0.854121619249126 0.393271112335655 df.mm.trans1:exp3 -0.135903882662471 0.198013264403536 -0.686337266707087 0.492682073073951 df.mm.trans2:exp3 -0.211567786601446 0.144075812542789 -1.46844763786158 0.142341648265941 df.mm.trans1:exp4 0.0546996419060929 0.198013264403536 0.276242311699984 0.782427118958004 df.mm.trans2:exp4 -0.102468449337943 0.144075812542789 -0.711212017683477 0.477142190941303 df.mm.trans1:exp5 -0.0899582897244956 0.198013264403536 -0.45430436185915 0.649722320479032 df.mm.trans2:exp5 -0.138074493120935 0.144075812542789 -0.958346100459637 0.338152681642422 df.mm.trans1:exp6 -0.249436906711180 0.198013264403536 -1.25969796752023 0.208113845962220 df.mm.trans2:exp6 -0.15041614304065 0.144075812542789 -1.04400690432322 0.296770205721741 df.mm.trans1:exp7 -0.0866730196755597 0.198013264403536 -0.437713200358773 0.661702098111162 df.mm.trans2:exp7 -0.0493236566171489 0.144075812542789 -0.342345156668823 0.732173277019266 df.mm.trans1:exp8 -0.093900197407245 0.198013264403536 -0.474211652891513 0.635467161806255 df.mm.trans2:exp8 -0.208445812319859 0.144075812542789 -1.44677866909793 0.148316644154025 df.mm.trans1:probe2 0.0192125109422154 0.137942088500487 0.139279542241726 0.889261268653765 df.mm.trans1:probe3 -0.0606626234957473 0.137942088500487 -0.439768776558239 0.660213055751495 df.mm.trans1:probe4 0.00523911936828148 0.137942088500487 0.0379805715951807 0.969711825898626 df.mm.trans1:probe5 -0.243492174421278 0.137942088500487 -1.76517680041084 0.0778824308306068 . df.mm.trans1:probe6 0.00489577373740781 0.137942088500487 0.0354915152483757 0.971695897553035 df.mm.trans1:probe7 0.00110881775283878 0.137942088500487 0.00803828450687019 0.993588276133304 df.mm.trans1:probe8 -0.125777740198000 0.137942088500487 -0.91181554205304 0.362116677408119 df.mm.trans1:probe9 0.104601257271107 0.137942088500487 0.758298343951329 0.448476355145131 df.mm.trans1:probe10 -0.113876128728126 0.137942088500487 -0.825535773497616 0.409292240123749 df.mm.trans1:probe11 -0.0298060366684363 0.137942088500487 -0.216076449127643 0.828978460492693 df.mm.trans1:probe12 -0.129767579944739 0.137942088500487 -0.94073956219882 0.347097675463959 df.mm.trans1:probe13 -0.119405473726419 0.137942088500487 -0.865620312295023 0.386935412606404 df.mm.trans1:probe14 -0.0171187885724774 0.137942088500487 -0.124101271472463 0.901263561148025 df.mm.trans1:probe15 -0.128725845631778 0.137942088500487 -0.933187593656912 0.350980255284354 df.mm.trans1:probe16 0.140917152992048 0.137942088500487 1.02156748911012 0.307267683498836 df.mm.trans1:probe17 0.0801305866162345 0.137942088500487 0.580900198679766 0.561457133783681 df.mm.trans1:probe18 0.0565811852213026 0.137942088500487 0.410180720303528 0.68177367793804 df.mm.trans1:probe19 0.0642402646944876 0.137942088500487 0.465704596710242 0.641542723355626 df.mm.trans1:probe20 -0.0788276259178156 0.137942088500487 -0.571454490610656 0.567838186406332 df.mm.trans1:probe21 0.0130670202879683 0.137942088500487 0.0947283054071069 0.924552297897718 df.mm.trans1:probe22 0.0644497035818744 0.137942088500487 0.46722290696394 0.640456598329715 df.mm.trans2:probe2 0.179801753470051 0.137942088500487 1.30345825139088 0.192760822652565 df.mm.trans2:probe3 0.187012451946427 0.137942088500487 1.35573162607123 0.175533970330657 df.mm.trans2:probe4 0.0739321475799741 0.137942088500487 0.535965116837515 0.592118716370227 df.mm.trans2:probe5 0.252097894704067 0.137942088500487 1.82756327270757 0.0679551650757426 . df.mm.trans2:probe6 0.149565017126571 0.137942088500487 1.08425947984718 0.278548084013447 df.mm.trans3:probe2 0.209304758575446 0.137942088500487 1.51733789774183 0.129542173750074 df.mm.trans3:probe3 0.116499571358099 0.137942088500487 0.844554208396577 0.398590372533391 df.mm.trans3:probe4 0.00580752745162786 0.137942088500487 0.0421011999655738 0.966427617427127 df.mm.trans3:probe5 0.277091310158277 0.137942088500487 2.00875101406993 0.0448699865492053 * df.mm.trans3:probe6 0.146156919648704 0.137942088500487 1.05955275316995 0.289640175063277 df.mm.trans3:probe7 0.146527897260664 0.137942088500487 1.06224212532600 0.288418529726693 df.mm.trans3:probe8 0.0388512819606904 0.137942088500487 0.28164922238765 0.778279012420068 df.mm.trans3:probe9 0.183097013992987 0.137942088500487 1.32734697570090 0.184739752280256 df.mm.trans3:probe10 0.0391698493693678 0.137942088500487 0.283958651019190 0.776509170295266 df.mm.trans3:probe11 0.0883297189289416 0.137942088500487 0.640339144412983 0.522119588930938