fitVsDatCorrelation=0.868559468778256 cont.fitVsDatCorrelation=0.237101662190593 fstatistic=7958.1448077495,65,991 cont.fstatistic=2059.70190797203,65,991 residuals=-0.855042459602089,-0.104381891415778,-0.00731042054773874,0.0855703170073775,1.20411434730890 cont.residuals=-0.645525546885299,-0.2586631480847,-0.0904823232291647,0.206204241624036,1.76542174048967 predictedValues: Include Exclude Both Lung 91.0676019842033 54.6067434549356 74.8456344096829 cerebhem 93.0564080278125 56.1941435112355 76.772419334382 cortex 101.528423993334 54.9456287968704 87.977708226637 heart 91.6483056325711 54.2885204498742 72.1960616398023 kidney 87.0807162911871 56.5999503873479 73.3366921727813 liver 94.3633987598678 53.6989742578159 68.2360968376283 stomach 105.649416625867 56.4186034144014 79.0332948685798 testicle 89.0351315894453 57.1514233987002 77.4564563089594 diffExp=36.4608585292677,36.862264516577,46.5827951964632,37.3597851826969,30.4807659038392,40.6644245020519,49.2308132114652,31.8837081907451 diffExpScore=0.996779651677627 diffExp1.5=1,1,1,1,1,1,1,1 diffExp1.5Score=0.888888888888889 diffExp1.4=1,1,1,1,1,1,1,1 diffExp1.4Score=0.888888888888889 diffExp1.3=1,1,1,1,1,1,1,1 diffExp1.3Score=0.888888888888889 diffExp1.2=1,1,1,1,1,1,1,1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 66.010801016189 60.4826334350684 66.8997609810946 cerebhem 69.451321694319 65.988046646484 64.0049182530132 cortex 71.1655699491817 65.086742200215 67.9067497379173 heart 70.1473878998252 73.8014841584478 69.4861053634676 kidney 78.6110963363622 68.0042515763299 72.1667048436281 liver 70.971182939261 65.6199130076903 70.0600625527413 stomach 72.063009968396 76.0974678769298 66.3042036040355 testicle 65.5137823432101 59.7118131285779 68.7464453251556 cont.diffExp=5.52816758112061,3.46327504783498,6.07882774896676,-3.65409625862254,10.6068447600323,5.35126993157077,-4.03445790853374,5.80196921463223 cont.diffExpScore=1.47698240577885 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=-0.0917137343930158 cont.tran.correlation=0.518159268039359 tran.covariance=-0.000160923928856721 cont.tran.covariance=0.00269403825786469 tran.mean=74.8333369109668 cont.tran.mean=68.6704065110305 weightedLogRatios: wLogRatio Lung 2.17664725908672 cerebhem 2.15931237135196 cortex 2.6483686672452 heart 2.22870709251783 kidney 1.83162879570843 liver 2.40458796268793 stomach 2.72665451063466 testicle 1.89183816225446 cont.weightedLogRatios: wLogRatio Lung 0.362625534349867 cerebhem 0.215610277487544 cortex 0.376829038090257 heart -0.217135869653262 kidney 0.622099823258187 liver 0.33106689916166 stomach -0.234498972163036 testicle 0.383524301672368 varWeightedLogRatios=0.103799072964326 cont.varWeightedLogRatios=0.0917959489787603 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.7712266115426 0.0867534477599309 54.9975445903408 2.26140190523226e-303 *** df.mm.trans1 0.171669066894586 0.0742340231423395 2.31253890908514 0.0209521349703291 * df.mm.trans2 -0.742942991031226 0.064910521820352 -11.4456481044385 1.41055160263026e-28 *** df.mm.exp2 0.0248412316516211 0.0819648401518942 0.303071800122909 0.761898752293429 df.mm.exp3 -0.0467322458593713 0.0819648401518942 -0.570149905407841 0.568705262402393 df.mm.exp4 0.0365540784395394 0.0819648401518942 0.445972667936627 0.65571440770088 df.mm.exp5 0.0114508050227803 0.0819648401518942 0.139703865725353 0.88892235870735 df.mm.exp6 0.111241762332129 0.0819648401518942 1.35718879126684 0.175030244758835 df.mm.exp7 0.126724249814822 0.0819648401518942 1.54608060700151 0.122404364625634 df.mm.exp8 -0.0113123059301315 0.0819648401518942 -0.138014127876879 0.89025728905019 df.mm.trans1:exp2 -0.00323749410083905 0.0748749042970406 -0.043238707698315 0.965519959871982 df.mm.trans2:exp2 0.00381393020765016 0.0513902846181272 0.0742150045673196 0.940854284123386 df.mm.trans1:exp3 0.155468934814549 0.0748749042970406 2.07638241776950 0.0381158800710052 * df.mm.trans2:exp3 0.0529189931820506 0.0513902846181272 1.02974703439148 0.303380024681432 df.mm.trans1:exp4 -0.0301977013605292 0.0748749042970406 -0.40330871396817 0.686808130730288 df.mm.trans2:exp4 -0.0423986652379599 0.0513902846181272 -0.825032699332519 0.409551572025606 df.mm.trans1:exp5 -0.0562174526882159 0.0748749042970406 -0.750818357846474 0.452940218719203 df.mm.trans2:exp5 0.0243999220121381 0.0513902846181272 0.47479639767419 0.63503671363257 df.mm.trans1:exp6 -0.075690599033003 0.0748749042970406 -1.01089410054838 0.312313868735865 df.mm.trans2:exp6 -0.128005243969165 0.0513902846181272 -2.49084520392037 0.0129067200657815 * df.mm.trans1:exp7 0.0217998628040505 0.0748749042970406 0.291150459672937 0.77099717438 df.mm.trans2:exp7 -0.0940826795507639 0.0513902846181272 -1.83074836517986 0.0674382681260858 . df.mm.trans1:exp8 -0.0112587749319621 0.0748749042970406 -0.150367803974704 0.880505040050996 df.mm.trans2:exp8 0.0568592205995395 0.0513902846181272 1.10641964764451 0.268813430913 df.mm.trans1:probe2 -0.207589221014162 0.0552987816411455 -3.75395650416471 0.000184188411682832 *** df.mm.trans1:probe3 -0.855197167880746 0.0552987816411455 -15.4650273025985 1.71757998770859e-48 *** df.mm.trans1:probe4 -0.96874809324005 0.0552987816411455 -17.5184346651002 4.56793250431697e-60 *** df.mm.trans1:probe5 -0.0233532821526746 0.0552987816411455 -0.422310970686891 0.672889656916066 df.mm.trans1:probe6 -1.03679795710442 0.0552987816411455 -18.7490198940112 2.30349875717368e-67 *** df.mm.trans1:probe7 -0.749104826669811 0.0552987816411455 -13.5464978510925 1.75992649433240e-38 *** df.mm.trans1:probe8 -0.42689224352826 0.0552987816411455 -7.71974048720502 2.84008490855738e-14 *** df.mm.trans1:probe9 -0.176896269210910 0.0552987816411455 -3.19891802244137 0.00142321170636274 ** df.mm.trans1:probe10 -0.244315936857863 0.0552987816411455 -4.41810704697476 1.10531728233954e-05 *** df.mm.trans1:probe11 -1.15980971154758 0.0552987816411454 -20.9735129260897 4.08140064959953e-81 *** df.mm.trans1:probe12 -0.909773163259214 0.0552987816411455 -16.4519567386326 5.92730427572059e-54 *** df.mm.trans1:probe13 -1.11881183315248 0.0552987816411455 -20.2321244690864 1.84412655596534e-76 *** df.mm.trans1:probe14 -0.9720493060735 0.0552987816411455 -17.5781324149507 2.04878886058257e-60 *** df.mm.trans1:probe15 -1.10774469536934 0.0552987816411455 -20.0319909859482 3.24138165133374e-75 *** df.mm.trans1:probe16 -1.06051077193758 0.0552987816411454 -19.1778325030673 5.80800827406716e-70 *** df.mm.trans1:probe17 -0.879188877781363 0.0552987816411455 -15.8988833332125 7.21290501334082e-51 *** df.mm.trans1:probe18 -0.93252276553521 0.0552987816411455 -16.8633510153388 2.75091728592748e-56 *** df.mm.trans1:probe19 -0.9976132370805 0.0552987816411455 -18.0404198333769 3.93058014075088e-63 *** df.mm.trans1:probe20 -0.841350411481674 0.0552987816411455 -15.2146283609196 3.87827352780216e-47 *** df.mm.trans1:probe21 -0.799361098094809 0.0552987816411455 -14.4553112088827 4.06793294106297e-43 *** df.mm.trans1:probe22 -0.9215247443271 0.0552987816411455 -16.6644674073874 3.72835905701625e-55 *** df.mm.trans2:probe2 -0.170466160804266 0.0552987816411454 -3.08263863588324 0.00210847339386300 ** df.mm.trans2:probe3 -0.141149186165756 0.0552987816411455 -2.55248274874709 0.0108448117728754 * df.mm.trans2:probe4 -0.109642815511594 0.0552987816411454 -1.98273474130239 0.0476728446133384 * df.mm.trans2:probe5 -0.101033109012617 0.0552987816411454 -1.82704041597622 0.0679943390815446 . df.mm.trans2:probe6 -0.0964859840013838 0.0552987816411454 -1.74481211227252 0.0813275615396671 . df.mm.trans3:probe2 0.400960839374793 0.0552987816411455 7.25080783834947 8.33612320355487e-13 *** df.mm.trans3:probe3 0.489754341451167 0.0552987816411455 8.85651233022395 3.74693913617671e-18 *** df.mm.trans3:probe4 -0.0586172186741305 0.0552987816411455 -1.06000922505887 0.289398681069481 df.mm.trans3:probe5 -0.246622765810994 0.0552987816411455 -4.45982277532662 9.14047122722268e-06 *** df.mm.trans3:probe6 -0.148417380497095 0.0552987816411455 -2.68391773005473 0.00739782971075234 ** df.mm.trans3:probe7 0.050680941314658 0.0552987816411455 0.916492910161126 0.35963139414533 df.mm.trans3:probe8 0.093051792509827 0.0552987816411455 1.68270963207969 0.092746312822872 . df.mm.trans3:probe9 0.355241482891382 0.0552987816411455 6.42403814964093 2.05694335349549e-10 *** df.mm.trans3:probe10 0.362677200693225 0.0552987816411455 6.55850255520588 8.73707488041845e-11 *** df.mm.trans3:probe11 -0.0420926128646639 0.0552987816411455 -0.761185176516521 0.446727557054957 df.mm.trans3:probe12 -0.0840061965244426 0.0552987816411455 -1.51913286389545 0.129048011003044 df.mm.trans3:probe13 -0.124135664376309 0.0552987816411455 -2.24481734845211 0.0249997751368282 * df.mm.trans3:probe14 0.354572966083787 0.0552987816411455 6.41194897176477 2.21985018146334e-10 *** df.mm.trans3:probe15 0.0667023950923461 0.0552987816411455 1.20621816815428 0.228021264842973 df.mm.trans3:probe16 0.37785143515726 0.0552987816411455 6.83290705407001 1.45097137956151e-11 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.21116280380109 0.170060972449441 24.7626644911317 9.16694660605031e-106 *** df.mm.trans1 -0.000800538355087693 0.145519405745755 -0.00550124810491844 0.995611768393028 df.mm.trans2 -0.108337170717901 0.127242740755581 -0.851421229019304 0.394741090952679 df.mm.exp2 0.18216052677321 0.160673964929520 1.13372771284455 0.257182964638838 df.mm.exp3 0.133615313086756 0.160673964929520 0.831592804381012 0.405839151573225 df.mm.exp4 0.221871342907985 0.160673964929520 1.38087924204341 0.167627416302305 df.mm.exp5 0.216125043633174 0.160673964929520 1.34511551842253 0.178895659500445 df.mm.exp6 0.107820952558677 0.160673964929520 0.67105428440739 0.502342321182051 df.mm.exp7 0.326323308265926 0.160673964929520 2.03096567890802 0.0425249994112694 * df.mm.exp8 -0.0476138764322552 0.160673964929520 -0.296338466864504 0.767033702237957 df.mm.trans1:exp2 -0.131352807275595 0.146775711693325 -0.894921957864838 0.371046111408042 df.mm.trans2:exp2 -0.0950431857361896 0.100739302036694 -0.943456861568985 0.345677216269115 df.mm.trans1:exp3 -0.0584245601524464 0.146775711693325 -0.398053325570101 0.690676612757472 df.mm.trans2:exp3 -0.0602507106206106 0.100739302036694 -0.59808544830561 0.549919574430958 df.mm.trans1:exp4 -0.161091153375679 0.146775711693325 -1.09753276967421 0.272675165674225 df.mm.trans2:exp4 -0.0228487741255422 0.100739302036694 -0.226810923478699 0.820617545923416 df.mm.trans1:exp5 -0.0414305597967309 0.146775711693325 -0.282271224024424 0.777794488254854 df.mm.trans2:exp5 -0.0989110904000803 0.100739302036694 -0.981852051784634 0.326412378533379 df.mm.trans1:exp6 -0.0353654123988370 0.146775711693325 -0.240948669168983 0.809644740299114 df.mm.trans2:exp6 -0.0262980238945488 0.100739302036694 -0.261050288843274 0.794107964766263 df.mm.trans1:exp7 -0.238600813907689 0.146775711693325 -1.62561510453599 0.104349504222108 df.mm.trans2:exp7 -0.0966645907494375 0.100739302036694 -0.959551920602223 0.337514822523974 df.mm.trans1:exp8 0.0400560339950267 0.146775711693325 0.272906419821832 0.784982008874946 df.mm.trans2:exp8 0.0347874789368743 0.100739302036694 0.345321818134127 0.729925728651626 df.mm.trans1:probe2 -0.0620945072860768 0.108401047151304 -0.572822024490283 0.566895144391222 df.mm.trans1:probe3 -0.0407881380311203 0.108401047151304 -0.376270701280116 0.70679619785898 df.mm.trans1:probe4 0.0051447307113623 0.108401047151304 0.0474601569501572 0.962156047117515 df.mm.trans1:probe5 0.0686856343054094 0.108401047151304 0.633625191918479 0.526471663171858 df.mm.trans1:probe6 -0.0307128945129854 0.108401047151304 -0.283326548221594 0.776985703119999 df.mm.trans1:probe7 -0.116851290742882 0.108401047151304 -1.07795352363878 0.281316812417328 df.mm.trans1:probe8 0.0125825038394618 0.108401047151304 0.116073637387463 0.907617698302906 df.mm.trans1:probe9 -0.0075001436839161 0.108401047151304 -0.0691888490103562 0.944853257000616 df.mm.trans1:probe10 0.0197596609141349 0.108401047151304 0.182282933914418 0.8553979711591 df.mm.trans1:probe11 -0.137928267997536 0.108401047151304 -1.27238870492660 0.203533504584983 df.mm.trans1:probe12 0.0663213981124194 0.108401047151304 0.61181510562208 0.540800426130256 df.mm.trans1:probe13 -0.080802885630613 0.108401047151304 -0.74540687340252 0.456202542423666 df.mm.trans1:probe14 0.0899774333370244 0.108401047151304 0.830042104772617 0.406714884346405 df.mm.trans1:probe15 -0.0511570580319367 0.108401047151304 -0.471924020812571 0.6370849121861 df.mm.trans1:probe16 0.0372743748982991 0.108401047151304 0.343856225357972 0.731027356488216 df.mm.trans1:probe17 -0.156589019600998 0.108401047151304 -1.44453419700304 0.148904857378308 df.mm.trans1:probe18 -0.0981309424795004 0.108401047151304 -0.905258252187646 0.365548615159671 df.mm.trans1:probe19 -0.0730696359649574 0.108401047151304 -0.674067620979418 0.500425518662632 df.mm.trans1:probe20 -0.102570583077403 0.108401047151304 -0.946213950629433 0.344270123765095 df.mm.trans1:probe21 0.0202459899497961 0.108401047151304 0.186769320793895 0.851879729249211 df.mm.trans1:probe22 -0.142463990875760 0.108401047151304 -1.31423076270574 0.189072664331477 df.mm.trans2:probe2 -0.0409971751697727 0.108401047151304 -0.378199069539887 0.70536371290986 df.mm.trans2:probe3 0.0607608992263223 0.108401047151304 0.560519485955825 0.57525184653925 df.mm.trans2:probe4 0.0761894353013423 0.108401047151304 0.702847779643663 0.482315685865702 df.mm.trans2:probe5 -0.0458636549650635 0.108401047151304 -0.423092360916475 0.672319671601272 df.mm.trans2:probe6 -0.0604154224864169 0.108401047151304 -0.557332461946517 0.577426156934499 df.mm.trans3:probe2 0.211083247217654 0.108401047151304 1.94724361770258 0.0517877023492037 . df.mm.trans3:probe3 0.0291133950222869 0.108401047151304 0.268571160402638 0.788315605304209 df.mm.trans3:probe4 0.0134828872369168 0.108401047151304 0.124379677053282 0.901039887420584 df.mm.trans3:probe5 0.122092409309865 0.108401047151304 1.12630285885938 0.260310014121434 df.mm.trans3:probe6 0.155664008949363 0.108401047151304 1.43600097084016 0.151317639009551 df.mm.trans3:probe7 0.061497651785918 0.108401047151304 0.56731603062912 0.57062797255465 df.mm.trans3:probe8 -0.0229098979689812 0.108401047151304 -0.211343880626946 0.832662397151422 df.mm.trans3:probe9 0.123165759781132 0.108401047151304 1.13620452032368 0.256145664240551 df.mm.trans3:probe10 0.134719722214804 0.108401047151304 1.24278986001643 0.214239250687310 df.mm.trans3:probe11 0.162221718930874 0.108401047151304 1.49649586598963 0.134842882600605 df.mm.trans3:probe12 0.0963347708550201 0.108401047151304 0.888688563317637 0.374386132649338 df.mm.trans3:probe13 0.0200871184309987 0.108401047151304 0.185303730534646 0.853028729716231 df.mm.trans3:probe14 0.250123526012991 0.108401047151304 2.30739031204996 0.0212384075578419 * df.mm.trans3:probe15 0.144536105225868 0.108401047151304 1.33334602408523 0.182724679211561 df.mm.trans3:probe16 0.117512370928822 0.108401047151304 1.08405199042774 0.278605411271666