fitVsDatCorrelation=0.698743525347619 cont.fitVsDatCorrelation=0.26348050509621 fstatistic=14385.6374393087,79,1313 cont.fstatistic=7903.68626678134,79,1313 residuals=-0.556986128318862,-0.0789630944123729,-0.00714562243146432,0.0675767691944436,1.03696003951530 cont.residuals=-0.457025393315029,-0.120158191806592,-0.0111141568751869,0.0977761058139221,1.28955713221878 predictedValues: Include Exclude Both Lung 56.9789957970401 57.4415903772064 50.5617984403037 cerebhem 62.2366406916016 73.3793452065428 54.4541364348817 cortex 55.2986709510099 53.8700198498522 51.2933096276817 heart 57.081878229166 51.8512869068768 52.6324702161169 kidney 56.8632512387869 55.4950580937249 51.4245897484257 liver 56.4451859828021 54.82273727215 53.6448248894931 stomach 58.2861430664671 52.9575984238414 52.9899060848458 testicle 57.5335527251058 54.7492831908352 51.8951366084712 diffExp=-0.462594580166282,-11.1427045149412,1.42865110115770,5.23059132228923,1.36819314506203,1.62244871065212,5.32854464262566,2.7842695342706 diffExpScore=4.10316597832921 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,0 diffExp1.3Score=0 diffExp1.2=0,0,0,0,0,0,0,0 diffExp1.2Score=0 cont.predictedValues: Include Exclude Both Lung 56.7334894529957 51.8756673425874 54.7758289369834 cerebhem 57.257036371755 51.2959331727606 55.03967611202 cortex 56.7735409882166 53.0234985622127 57.5475809346556 heart 56.0911355994223 48.4112878257932 55.3413462201832 kidney 56.1470153680158 46.2158921715855 55.4881721589561 liver 54.5388506905292 49.2616603774677 52.6354776097548 stomach 54.9321623699319 49.6884593198511 54.6295522367299 testicle 57.0419496080679 53.7713738234839 52.9505540332238 cont.diffExp=4.85782211040831,5.96110319899439,3.75004242600388,7.67984777362917,9.93112319643032,5.27719031306157,5.24370305008078,3.27057578458405 cont.diffExpScore=0.978710452896676 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,1,0,0,0 cont.diffExp1.2Score=0.5 tran.correlation=0.868690209874738 cont.tran.correlation=0.534668404351733 tran.covariance=0.0032698996129281 cont.tran.covariance=0.000464012345513948 tran.mean=57.2057023751881 cont.tran.mean=53.3161845652923 weightedLogRatios: wLogRatio Lung -0.0327214467114451 cerebhem -0.693923451928292 cortex 0.104690218116587 heart 0.384084980631945 kidney 0.0981146788724137 liver 0.117204965183595 stomach 0.385162141804829 testicle 0.199783507247778 cont.weightedLogRatios: wLogRatio Lung 0.357487100539850 cerebhem 0.438940632019269 cortex 0.273675853480487 heart 0.582110958707955 kidney 0.765099968044865 liver 0.401779951473776 stomach 0.396884459695099 testicle 0.237025092617927 varWeightedLogRatios=0.116167497605763 cont.varWeightedLogRatios=0.0291880305126467 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.11775374578335 0.0623487511895018 66.0438848769868 0 *** df.mm.trans1 -0.0372255077304163 0.0537296810488535 -0.692829493935933 0.488539081894444 df.mm.trans2 -0.0765621505636962 0.0459208141932654 -1.66726465784060 0.0957002652993853 . df.mm.exp2 0.258972588943663 0.0570639083359705 4.53829042726852 6.19029608576841e-06 *** df.mm.exp3 -0.108492344577822 0.0570639083359705 -1.90124279499155 0.0574889730973328 . df.mm.exp4 -0.140721779826480 0.0570639083359705 -2.46603823555099 0.0137887107973136 * df.mm.exp5 -0.0534281975948672 0.0570639083359704 -0.936287035937013 0.349297594676702 df.mm.exp6 -0.115264972057462 0.0570639083359705 -2.01992775151021 0.0435936563680213 * df.mm.exp7 -0.105500496205282 0.0570639083359705 -1.84881301126687 0.0647094994767317 . df.mm.exp8 -0.064347496830338 0.0570639083359704 -1.12763914542068 0.259678365807320 df.mm.trans1:exp2 -0.170711389129023 0.0533463490592263 -3.20005758856141 0.00140687593853294 ** df.mm.trans2:exp2 -0.0140987053616843 0.0326678337088764 -0.431577602828725 0.666119292878544 df.mm.trans1:exp3 0.0785585142467857 0.0533463490592262 1.47261275855201 0.141095143024573 df.mm.trans2:exp3 0.0442978377649922 0.0326678337088764 1.35600781367256 0.17532983504125 df.mm.trans1:exp4 0.142525771964992 0.0533463490592262 2.67170620817474 0.0076400152716502 ** df.mm.trans2:exp4 0.038332922016637 0.0326678337088764 1.17341487526372 0.240842288214179 df.mm.trans1:exp5 0.0513947767665078 0.0533463490592262 0.963416947417495 0.335515721192086 df.mm.trans2:exp5 0.0189535590442197 0.0326678337088764 0.580190263398754 0.561885869131433 df.mm.trans1:exp6 0.105852274569125 0.0533463490592262 1.98424590315647 0.0474363456953640 * df.mm.trans2:exp6 0.068601381701767 0.0326678337088764 2.09996727401997 0.0359221208400076 * df.mm.trans1:exp7 0.128182172924702 0.0533463490592262 2.40282934418607 0.0164068388686291 * df.mm.trans2:exp7 0.0242234478418489 0.0326678337088764 0.741507626667849 0.458518312931733 df.mm.trans1:exp8 0.0740330949678729 0.0533463490592262 1.38778184961973 0.165438938738412 df.mm.trans2:exp8 0.0163431610542729 0.0326678337088764 0.500282975599699 0.61695967756596 df.mm.trans1:probe2 0.0194223270933771 0.0405194608368489 0.479333305336438 0.631781355745902 df.mm.trans1:probe3 0.0358215377086708 0.0405194608368489 0.884057610068055 0.376826962523716 df.mm.trans1:probe4 -0.0860297633351546 0.0405194608368489 -2.12317147263021 0.0339261155432056 * df.mm.trans1:probe5 -0.175726420120295 0.0405194608368489 -4.33684003910752 1.55600741615585e-05 *** df.mm.trans1:probe6 0.0937373238701992 0.0405194608368489 2.31339020644010 0.0208550577054427 * df.mm.trans1:probe7 -0.0452194416211216 0.0405194608368488 -1.11599317185382 0.264629253161645 df.mm.trans1:probe8 -0.137820414018064 0.0405194608368489 -3.40133879305543 0.000690720516781374 *** df.mm.trans1:probe9 -0.0404023211186913 0.0405194608368489 -0.99710905042322 0.318895300461388 df.mm.trans1:probe10 -0.0187158799712559 0.0405194608368489 -0.461898544174 0.644230597222733 df.mm.trans1:probe11 -0.124142180771849 0.0405194608368489 -3.0637668470394 0.00223020195842145 ** df.mm.trans1:probe12 -0.270823669205665 0.0405194608368489 -6.6837925187636 3.43258641801345e-11 *** df.mm.trans1:probe13 -0.230023782901733 0.0405194608368489 -5.6768717586821 1.68652079080603e-08 *** df.mm.trans1:probe14 -0.286138445180256 0.0405194608368489 -7.06175351968255 2.65791708355621e-12 *** df.mm.trans1:probe15 -0.21308087995448 0.0405194608368489 -5.2587293994964 1.69183024294825e-07 *** df.mm.trans1:probe16 -0.179972678731475 0.0405194608368489 -4.44163557496811 9.67803964700832e-06 *** df.mm.trans1:probe17 -0.0344500684087782 0.0405194608368489 -0.850210434622784 0.395363108487812 df.mm.trans1:probe18 -0.06861490906023 0.0405194608368489 -1.69338159104602 0.0906200548977528 . df.mm.trans1:probe19 0.0596403635810043 0.0405194608368489 1.47189430336069 0.141289059051898 df.mm.trans1:probe20 -0.0769597381069714 0.0405194608368489 -1.89932779255995 0.0577403757333947 . df.mm.trans1:probe21 0.0141294942147563 0.0405194608368489 0.348708840713565 0.7273638133557 df.mm.trans1:probe22 -0.0491575584194131 0.0405194608368489 -1.21318392209969 0.225277716603240 df.mm.trans1:probe23 0.0233477535801763 0.0405194608368489 0.576210865050396 0.564571416264381 df.mm.trans1:probe24 0.0059967703605792 0.0405194608368489 0.147997289123000 0.882367631432518 df.mm.trans1:probe25 0.0208006077190157 0.0405194608368488 0.513348580889788 0.607793871530298 df.mm.trans1:probe26 -0.0732089979352601 0.0405194608368489 -1.80676140361382 0.0710283404944583 . df.mm.trans1:probe27 0.128845363301261 0.0405194608368489 3.17983903635972 0.00150800499898440 ** df.mm.trans1:probe28 -0.0818721028559585 0.0405194608368489 -2.02056249429417 0.0435277551914604 * df.mm.trans1:probe29 -0.182261405092903 0.0405194608368489 -4.49812019530015 7.46141797371097e-06 *** df.mm.trans1:probe30 0.0645085397887597 0.0405194608368489 1.59203845402836 0.111616768312932 df.mm.trans1:probe31 -0.0299856996244876 0.0405194608368489 -0.740032048926433 0.459412845672636 df.mm.trans1:probe32 -0.0296114365220066 0.0405194608368489 -0.730795423000238 0.465034502105753 df.mm.trans2:probe2 0.130597969084722 0.0405194608368489 3.22309246933401 0.00129930859026760 ** df.mm.trans2:probe3 0.0949241633430726 0.0405194608368489 2.34268081022311 0.0192944343411763 * df.mm.trans2:probe4 -0.0124735659081572 0.0405194608368489 -0.307841359449027 0.758251873356947 df.mm.trans2:probe5 -0.00891836642165135 0.0405194608368489 -0.220100816680682 0.825826854054583 df.mm.trans2:probe6 0.0448722357264745 0.0405194608368489 1.10742430426584 0.268313354512373 df.mm.trans3:probe2 -0.202228484685195 0.0405194608368488 -4.99089771948018 6.8163995115086e-07 *** df.mm.trans3:probe3 0.343998565904681 0.0405194608368489 8.48971232094591 5.52434132942446e-17 *** df.mm.trans3:probe4 -0.115990300231985 0.0405194608368489 -2.86258251804038 0.00426875091862759 ** df.mm.trans3:probe5 -0.0708792787992355 0.0405194608368489 -1.74926510213524 0.080478842175032 . df.mm.trans3:probe6 -0.239715535606199 0.0405194608368489 -5.91605936148586 4.20102932541712e-09 *** df.mm.trans3:probe7 -0.0857310603693504 0.0405194608368489 -2.11579963303425 0.0345496880414192 * df.mm.trans3:probe8 0.00587031717412027 0.0405194608368489 0.144876487813030 0.884830625439186 df.mm.trans3:probe9 -0.106945234802838 0.0405194608368489 -2.63935483330964 0.0084047485487997 ** df.mm.trans3:probe10 -0.197888316292831 0.0405194608368489 -4.88378453725299 1.16855184000928e-06 *** df.mm.trans3:probe11 -0.133304947066731 0.0405194608368489 -3.28989933018807 0.00102881898052333 ** df.mm.trans3:probe12 0.241686314662112 0.0405194608368489 5.96469720155604 3.1468433320869e-09 *** df.mm.trans3:probe13 -0.195059942827812 0.0405194608368488 -4.81398169667702 1.65102576104384e-06 *** df.mm.trans3:probe14 -0.180185873028377 0.0405194608368488 -4.44689710344106 9.4475287212412e-06 *** df.mm.trans3:probe15 -0.103839482300160 0.0405194608368489 -2.56270641700462 0.0104966677534289 * df.mm.trans3:probe16 -0.173358946693274 0.0405194608368489 -4.27841198063572 2.01880123192601e-05 *** df.mm.trans3:probe17 -0.158832409009215 0.0405194608368489 -3.91990430595195 9.31539742029194e-05 *** df.mm.trans3:probe18 -0.265039367485186 0.0405194608368488 -6.54103884926712 8.73065616317893e-11 *** df.mm.trans3:probe19 0.137709376940946 0.0405194608368489 3.3985984536031 0.000697616075222505 *** df.mm.trans3:probe20 -0.115660752800428 0.0405194608368489 -2.85444945247753 0.00437888873058521 ** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.0073874063984 0.084076002260865 47.663867199163 1.18202718781756e-288 *** df.mm.trans1 0.0486937882867673 0.072453364328163 0.672070769084215 0.501656883006307 df.mm.trans2 -0.0756385469821288 0.0619232687788592 -1.22148827853790 0.222120470662112 df.mm.exp2 -0.00685779775483764 0.0769495009079937 -0.089120756780961 0.92899953288891 df.mm.exp3 -0.0267720295474192 0.0769495009079937 -0.347916870564628 0.727958382848823 df.mm.exp4 -0.0907750083300343 0.0769495009079937 -1.17966987776271 0.238345232895517 df.mm.exp5 -0.138838136629036 0.0769495009079937 -1.80427598607873 0.0714171331186749 . df.mm.exp6 -0.0512964720427516 0.0769495009079937 -0.666625142950379 0.505128722578225 df.mm.exp7 -0.072668777619986 0.0769495009079937 -0.94436970691823 0.345154496791037 df.mm.exp8 0.0752041570325348 0.0769495009079937 0.977318321043488 0.328591614382615 df.mm.trans1:exp2 0.0160436594108974 0.0719364490634353 0.223025456771570 0.82355038408239 df.mm.trans2:exp2 -0.00438057149921848 0.0440518985282823 -0.0994411511323639 0.920803190581595 df.mm.trans1:exp3 0.0274777397880522 0.0719364490634353 0.381972423518177 0.702543630446355 df.mm.trans2:exp3 0.0486573710353214 0.0440518985282823 1.10454651583478 0.269558506590083 df.mm.trans1:exp4 0.0793881183853801 0.0719364490634353 1.10358683836860 0.269974617842948 df.mm.trans2:exp4 0.0216581714988156 0.0440518985282823 0.491651261861292 0.623048076414421 df.mm.trans1:exp5 0.128446982496650 0.0719364490634352 1.78556189760468 0.0744009638497454 . df.mm.trans2:exp5 0.0233120190613898 0.0440518985282823 0.529194423854921 0.596760036965888 df.mm.trans1:exp6 0.0118450971744366 0.0719364490634353 0.164660576504010 0.86923649380149 df.mm.trans2:exp6 -0.000407272332306546 0.0440518985282823 -0.00924528444659582 0.992624839836416 df.mm.trans1:exp7 0.0404031108359055 0.0719364490634353 0.561650058654925 0.574450319156238 df.mm.trans2:exp7 0.0295916340108068 0.0440518985282823 0.671744805545857 0.501864343440364 df.mm.trans1:exp8 -0.0697818811288347 0.0719364490634353 -0.970049009053803 0.332200720038606 df.mm.trans2:exp8 -0.0393127594411804 0.0440518985282823 -0.892419186336332 0.372331812767492 df.mm.trans1:probe2 -0.0340335222669155 0.0546396554210624 -0.622872197942089 0.533476675014808 df.mm.trans1:probe3 0.00742643407779725 0.0546396554210624 0.135916561343001 0.89190807745849 df.mm.trans1:probe4 -0.0694150387401119 0.0546396554210624 -1.27041501644159 0.204161900634817 df.mm.trans1:probe5 -0.0185596592813619 0.0546396554210624 -0.339673798056339 0.734156520909378 df.mm.trans1:probe6 -0.00290816592191257 0.0546396554210624 -0.053224455745589 0.957561166883727 df.mm.trans1:probe7 -0.0366874462782273 0.0546396554210624 -0.671443587912618 0.502056094677782 df.mm.trans1:probe8 0.0627388189569052 0.0546396554210624 1.14822867152857 0.251083325027373 df.mm.trans1:probe9 -0.0231932616681949 0.0546396554210624 -0.424476719142237 0.671287721857787 df.mm.trans1:probe10 -0.120010020488685 0.0546396554210624 -2.19639050729488 0.0282383279322407 * df.mm.trans1:probe11 -0.0423593272928093 0.0546396554210624 -0.775248799912465 0.438332253859567 df.mm.trans1:probe12 -0.00722901579555564 0.0546396554210624 -0.132303466042156 0.894764537192717 df.mm.trans1:probe13 -0.0576564617348185 0.0546396554210624 -1.05521276242517 0.291522152432778 df.mm.trans1:probe14 0.0130910061451313 0.0546396554210624 0.239588006993269 0.810687057989358 df.mm.trans1:probe15 0.0251453728288902 0.0546396554210624 0.460203722646414 0.64544619892094 df.mm.trans1:probe16 0.00896295787298465 0.0546396554210624 0.164037598771709 0.86972679188779 df.mm.trans1:probe17 -0.0699576735233928 0.0546396554210624 -1.28034616954092 0.200649555616540 df.mm.trans1:probe18 0.0225234991603154 0.0546396554210624 0.412218909265542 0.68024626927301 df.mm.trans1:probe19 -0.0667777823942218 0.0546396554210624 -1.22214867351598 0.221870762717978 df.mm.trans1:probe20 -0.0673130282177185 0.0546396554210624 -1.23194459589822 0.218190356829369 df.mm.trans1:probe21 -0.0162564748953089 0.0546396554210624 -0.297521548590191 0.766115424652092 df.mm.trans1:probe22 -0.0917815389476618 0.0546396554210624 -1.6797605738978 0.0932418042982178 . df.mm.trans1:probe23 0.0749375340464514 0.0546396554210624 1.37148621214702 0.170457762012676 df.mm.trans1:probe24 -0.0178089016531509 0.0546396554210624 -0.325933637683337 0.744526502085993 df.mm.trans1:probe25 -0.0252047892145192 0.0546396554210624 -0.461291145053659 0.644666141711595 df.mm.trans1:probe26 0.0193307600750783 0.0546396554210624 0.353786273469556 0.723555861143264 df.mm.trans1:probe27 -0.0513355656578683 0.0546396554210624 -0.939529454610717 0.347631780150959 df.mm.trans1:probe28 -0.0699974944611072 0.0546396554210624 -1.28107496143039 0.200393553861086 df.mm.trans1:probe29 -0.0152368385446558 0.0546396554210624 -0.278860443522898 0.780395839520683 df.mm.trans1:probe30 -0.0935657488557818 0.0546396554210624 -1.71241469468920 0.0870563834568954 . df.mm.trans1:probe31 -0.0866618485580346 0.0546396554210624 -1.5860614033929 0.112966167889548 df.mm.trans1:probe32 -0.0714655796939184 0.0546396554210624 -1.30794345504547 0.191121430426751 df.mm.trans2:probe2 0.0428578280009477 0.0546396554210624 0.784372223263087 0.432963216429888 df.mm.trans2:probe3 0.0728164451695368 0.0546396554210624 1.33266662478746 0.182872446365313 df.mm.trans2:probe4 0.0538012281379743 0.0546396554210624 0.984655333628534 0.324974804988066 df.mm.trans2:probe5 0.106374613774014 0.0546396554210624 1.94683903026608 0.0517670396491568 . df.mm.trans2:probe6 0.168775455586417 0.0546396554210624 3.08888213671563 0.00205127733593058 ** df.mm.trans3:probe2 0.00951549568749807 0.0546396554210624 0.174149994434812 0.86177442999439 df.mm.trans3:probe3 0.0522735439727968 0.0546396554210624 0.956696076685844 0.338896791694837 df.mm.trans3:probe4 0.0152475316753236 0.0546396554210624 0.279056146270023 0.780245683061831 df.mm.trans3:probe5 0.0404006420853613 0.0546396554210624 0.739401480006182 0.459795410803506 df.mm.trans3:probe6 0.0154013121464163 0.0546396554210624 0.281870594309777 0.778087157286319 df.mm.trans3:probe7 0.0767125219272451 0.0546396554210624 1.40397155392151 0.160563798113099 df.mm.trans3:probe8 0.0152861951067057 0.0546396554210624 0.279763753795805 0.779702826951829 df.mm.trans3:probe9 0.0163144540108890 0.0546396554210624 0.298582666474871 0.765305738597411 df.mm.trans3:probe10 -0.0238499138528843 0.0546396554210624 -0.436494587476675 0.662549690364909 df.mm.trans3:probe11 0.100166328243138 0.0546396554210624 1.83321668980596 0.0669966441019354 . df.mm.trans3:probe12 0.0100510257969764 0.0546396554210624 0.183951119741176 0.85408020528523 df.mm.trans3:probe13 0.0146726601310812 0.0546396554210624 0.268535004805782 0.788329718602453 df.mm.trans3:probe14 0.00325317688694985 0.0546396554210624 0.0595387518804854 0.952532060929077 df.mm.trans3:probe15 0.0224060084880997 0.0546396554210624 0.410068627179933 0.681822503487503 df.mm.trans3:probe16 -0.00883235676630814 0.0546396554210624 -0.161647373107398 0.871608419195882 df.mm.trans3:probe17 0.0242582041637976 0.0546396554210624 0.443967004858646 0.657139595085905 df.mm.trans3:probe18 0.0558874349734892 0.0546396554210624 1.02283651942552 0.306573559002533 df.mm.trans3:probe19 0.0460266510344968 0.0546396554210624 0.842367154035063 0.399735881292778 df.mm.trans3:probe20 -0.0290634926063938 0.0546396554210624 -0.531912077088071 0.594876876853408