fitVsDatCorrelation=0.909643349316568 cont.fitVsDatCorrelation=0.261948073466742 fstatistic=11224.9791389898,57,807 cont.fstatistic=2068.01578399702,57,807 residuals=-0.655420334401583,-0.0861632493836221,-0.00405388824733712,0.0854970636488767,0.819619221091606 cont.residuals=-0.829383720898335,-0.267106358376254,-0.0335897617720193,0.237376029378417,1.17573841751232 predictedValues: Include Exclude Both Lung 98.773232216232 43.4379879118708 76.0634295877318 cerebhem 90.7323892925643 49.2906605992334 70.8638050915494 cortex 83.5290244990886 45.7578390734668 70.972252695801 heart 84.9941886737857 45.6017573691488 72.972452317056 kidney 100.636608538492 44.0735708759304 71.3177188598922 liver 90.9682079865938 50.6084968250327 78.0626893035879 stomach 96.802346251848 45.8285621941205 87.474003285453 testicle 93.516095830063 49.4344806140204 80.0289013493272 diffExp=55.3352443043613,41.441728693331,37.7711854256218,39.3924313046369,56.5630376625618,40.3597111615611,50.9737840577275,44.0816152160427 diffExpScore=0.997274600894123 diffExp1.5=1,1,1,1,1,1,1,1 diffExp1.5Score=0.888888888888889 diffExp1.4=1,1,1,1,1,1,1,1 diffExp1.4Score=0.888888888888889 diffExp1.3=1,1,1,1,1,1,1,1 diffExp1.3Score=0.888888888888889 diffExp1.2=1,1,1,1,1,1,1,1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 72.808836032665 67.337249262156 72.0329674899568 cerebhem 73.4088571328356 70.3609923092654 70.0882720994185 cortex 74.6270589084827 72.731536358245 69.2928462135092 heart 71.503221444229 78.2796801807454 71.9484119788297 kidney 70.5782859973578 82.8117417655748 71.7270923867861 liver 75.1193621115669 75.833958167584 73.1701616779514 stomach 75.9777019174993 87.6195035235196 70.013674471639 testicle 75.2715739053956 90.8219550983914 70.2762560160552 cont.diffExp=5.47158677050911,3.04786482357019,1.89552255023774,-6.77645873651632,-12.2334557682170,-0.714596056017172,-11.6418016060202,-15.5503811929958 cont.diffExpScore=1.52877437897473 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,-1 cont.diffExp1.2Score=0.5 tran.correlation=-0.317695371489037 cont.tran.correlation=0.269849029314387 tran.covariance=-0.00116586545065777 cont.tran.covariance=0.000689044976493273 tran.mean=69.6240905469682 cont.tran.mean=75.9432196322196 weightedLogRatios: wLogRatio Lung 3.43554685674324 cerebhem 2.56447850965647 cortex 2.48211893738624 heart 2.57227665383444 kidney 3.46667122336859 liver 2.47299374208788 stomach 3.13970230949130 testicle 2.68980007824804 cont.weightedLogRatios: wLogRatio Lung 0.331930302442832 cerebhem 0.18127712346519 cortex 0.110621473512213 heart -0.390705445154257 kidney -0.693201301331791 liver -0.0409371886270891 stomach -0.627525805044055 testicle -0.829130688634724 varWeightedLogRatios=0.181256197766280 cont.varWeightedLogRatios=0.198902497392229 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.53711885147935 0.0738548789734606 61.432892647617 1.6455660656724e-306 *** df.mm.trans1 0.411898970150627 0.0638478919011592 6.45125403338726 1.91061507973757e-10 *** df.mm.trans2 -0.764340812930975 0.0567037004546053 -13.4795578913386 1.69462458733071e-37 *** df.mm.exp2 0.112295820351079 0.0733534066248613 1.5308875963372 0.126189060317176 df.mm.exp3 -0.0463251031792005 0.0733534066248613 -0.631533084974677 0.527870865008326 df.mm.exp4 -0.0601462670098097 0.0733534066248613 -0.819951925578664 0.412485620077254 df.mm.exp5 0.0976381856867005 0.0733534066248612 1.33106545666018 0.183543390511374 df.mm.exp6 0.0445239506357646 0.0733534066248612 0.606978635136413 0.544035819190287 df.mm.exp7 -0.106356289130785 0.0733534066248613 -1.44991615283398 0.147470417537398 df.mm.exp8 0.0238004991604723 0.0733534066248613 0.324463446969698 0.745671274970168 df.mm.trans1:exp2 -0.197208062480329 0.0677738850384719 -2.90979427206192 0.00371609697487525 ** df.mm.trans2:exp2 0.0141044468082594 0.051232241484708 0.275304113181722 0.783153076932273 df.mm.trans1:exp3 -0.121307365631403 0.0677738850384719 -1.78988360431960 0.0738474525060482 . df.mm.trans2:exp3 0.098353870325404 0.051232241484708 1.91976512202303 0.055239843641297 . df.mm.trans1:exp4 -0.0900974864412362 0.0677738850384719 -1.32938352862747 0.184097144116144 df.mm.trans2:exp4 0.108758165819247 0.051232241484708 2.12284613492285 0.0340706002880792 * df.mm.trans1:exp5 -0.0789487313046723 0.0677738850384719 -1.16488425091548 0.244410070076168 df.mm.trans2:exp5 -0.083112238516797 0.051232241484708 -1.62226434191064 0.105137336554249 df.mm.trans1:exp6 -0.126840507005422 0.0677738850384719 -1.8715248053645 0.0616339482686471 . df.mm.trans2:exp6 0.108261177238336 0.051232241484708 2.11314543539247 0.0348947497998224 * df.mm.trans1:exp7 0.0862008821980757 0.0677738850384719 1.27188934423847 0.203778836621525 df.mm.trans2:exp7 0.159929458802521 0.051232241484708 3.12165648364726 0.00186246124245736 ** df.mm.trans1:exp8 -0.0784935688268989 0.0677738850384719 -1.15816835322841 0.247137973652413 df.mm.trans2:exp8 0.105513313925613 0.051232241484708 2.05951000518116 0.0397656807626278 * df.mm.trans1:probe2 -0.0381719015003088 0.0454641042135838 -0.83960527014857 0.401378398296516 df.mm.trans1:probe3 -0.241825178771627 0.0454641042135838 -5.31903537867076 1.35200935611913e-07 *** df.mm.trans1:probe4 -0.334894958180283 0.0454641042135838 -7.36614003449832 4.34344933050797e-13 *** df.mm.trans1:probe5 -0.145247900416158 0.0454641042135838 -3.19478196983282 0.00145373695109414 ** df.mm.trans1:probe6 -0.5031740897232 0.0454641042135838 -11.0675025589278 1.32364858082546e-26 *** df.mm.trans1:probe7 -0.181986291601616 0.0454641042135838 -4.00285664370886 6.83473429506451e-05 *** df.mm.trans1:probe8 -0.116008739977739 0.0454641042135838 -2.55165568494975 0.0109045414911412 * df.mm.trans1:probe9 0.082193188412696 0.0454641042135838 1.80786996322559 0.0709989367838442 . df.mm.trans1:probe10 -0.91259282650026 0.0454641042135838 -20.0728210153010 5.21794215735217e-73 *** df.mm.trans1:probe11 -0.722359136158304 0.0454641042135838 -15.8885597473727 1.15407650898622e-49 *** df.mm.trans1:probe12 -1.00896792345891 0.0454641042135837 -22.1926273685922 1.48320759882402e-85 *** df.mm.trans1:probe13 -0.912808495828294 0.0454641042135838 -20.0775647429465 4.89607385951388e-73 *** df.mm.trans1:probe14 -0.77358047116832 0.0454641042135838 -17.0151921950150 1.03124791963763e-55 *** df.mm.trans1:probe15 -0.903833551450583 0.0454641042135837 -19.8801574799429 6.89768397992432e-72 *** df.mm.trans1:probe16 -0.573262899728249 0.0454641042135838 -12.6091321855841 2.11087424143154e-33 *** df.mm.trans1:probe17 -0.651070817323296 0.0454641042135838 -14.3205464747454 1.29583093728905e-41 *** df.mm.trans1:probe18 -0.745668149661549 0.0454641042135838 -16.4012502293789 2.16201010379952e-52 *** df.mm.trans1:probe19 -0.757960668282054 0.0454641042135838 -16.6716287803949 7.57345668787203e-54 *** df.mm.trans1:probe20 -0.517115278707096 0.0454641042135838 -11.3741442320685 6.59294587910996e-28 *** df.mm.trans1:probe21 -0.727399387061209 0.0454641042135838 -15.9994219537240 2.99363883088691e-50 *** df.mm.trans2:probe2 -0.0097502735913162 0.0454641042135838 -0.21446091944341 0.830241818171981 df.mm.trans2:probe3 -0.089765090115747 0.0454641042135838 -1.97441677711374 0.0486749411594692 * df.mm.trans2:probe4 0.0857111986963345 0.0454641042135838 1.88524991702631 0.0597551350591668 . df.mm.trans2:probe5 -0.0344274704062728 0.0454641042135838 -0.757245105821012 0.449124067418216 df.mm.trans2:probe6 0.0265763936728352 0.0454641042135838 0.584557732579161 0.559008515874106 df.mm.trans3:probe2 0.0949697946340275 0.0454641042135838 2.08889620232862 0.0370298419042287 * df.mm.trans3:probe3 0.187193890554208 0.0454641042135838 4.1173997330905 4.22620732413106e-05 *** df.mm.trans3:probe4 0.381024224165955 0.0454641042135838 8.38077051680064 2.32489121226441e-16 *** df.mm.trans3:probe5 0.246637153476222 0.0454641042135838 5.42487656454324 7.67052205353052e-08 *** df.mm.trans3:probe6 0.0812123283070894 0.0454641042135838 1.78629557783797 0.0744267446303187 . df.mm.trans3:probe7 0.113517747766833 0.0454641042135838 2.49686537831127 0.0127279546430735 * df.mm.trans3:probe8 0.00039582740082018 0.0454641042135838 0.00870637193159334 0.99305555977166 df.mm.trans3:probe9 0.217064283764973 0.0454641042135838 4.77441021921903 2.13996713350984e-06 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.30129048045876 0.171588112884406 25.0675318246341 5.17898136606691e-103 *** df.mm.trans1 0.0495559323104595 0.148338734491790 0.334072772565026 0.738411439275885 df.mm.trans2 -0.0478470935796398 0.131740530751728 -0.363191899308574 0.716556650548114 df.mm.exp2 0.0795011529117587 0.170423034894219 0.466493000556554 0.640988556728955 df.mm.exp3 0.140509577559457 0.170423034894219 0.824475269124686 0.40991317909437 df.mm.exp4 0.133654208586782 0.170423034894219 0.784249668301827 0.433123759294561 df.mm.exp5 0.179996869435441 0.170423034894219 1.05617688094314 0.291203485371535 df.mm.exp6 0.134409831730499 0.170423034894219 0.788683477054182 0.430528651467704 df.mm.exp7 0.334325954684536 0.170423034894219 1.96174158553186 0.0501359622974443 . df.mm.exp8 0.357142631781029 0.170423034894219 2.0956241742949 0.0364265699673706 * df.mm.trans1:exp2 -0.0712938770990442 0.157460051363363 -0.45277437979823 0.6508329112396 df.mm.trans2:exp2 -0.0355756942273114 0.119028610667119 -0.298883554364960 0.76510584377862 df.mm.trans1:exp3 -0.115843738076342 0.157460051363363 -0.735702402439938 0.462125596606005 df.mm.trans2:exp3 -0.0634480638831787 0.119028610667119 -0.533048848739575 0.594146523502293 df.mm.trans1:exp4 -0.151749026650204 0.157460051363363 -0.963730326113129 0.335469835863081 df.mm.trans2:exp4 0.0169202839513068 0.119028610667119 0.142153082830034 0.886994570757991 df.mm.trans1:exp5 -0.211111657932957 0.157460051363363 -1.34073154495412 0.180384900962277 df.mm.trans2:exp5 0.0268594262640684 0.119028610667119 0.225655211075132 0.821526729921801 df.mm.trans1:exp6 -0.103168810371578 0.157460051363363 -0.655206253765918 0.512521687616585 df.mm.trans2:exp6 -0.0155772068697848 0.119028610667119 -0.130869433680519 0.895911211218933 df.mm.trans1:exp7 -0.29172337518203 0.157460051363363 -1.85268182409539 0.0642928989905684 . df.mm.trans2:exp7 -0.0710359029616782 0.119028610667119 -0.596796875671688 0.550810388155751 df.mm.trans1:exp8 -0.323877394736865 0.157460051363363 -2.05688612402055 0.040018112806726 * df.mm.trans2:exp8 -0.057955143564763 0.119028610667119 -0.486900949611546 0.626460740811246 df.mm.trans1:probe2 -0.0678788730877161 0.105627413576726 -0.642625534311789 0.520649636878151 df.mm.trans1:probe3 -0.210853468194405 0.105627413576726 -1.99620023869318 0.0462477281394217 * df.mm.trans1:probe4 -0.229940022102453 0.105627413576726 -2.17689721177758 0.0297774142841036 * df.mm.trans1:probe5 -0.100087901454218 0.105627413576726 -0.94755611318188 0.343639124239341 df.mm.trans1:probe6 0.116877566620801 0.105627413576726 1.10650789092646 0.268836479733600 df.mm.trans1:probe7 -0.0949645280241478 0.105627413576726 -0.89905191094324 0.368893185231892 df.mm.trans1:probe8 -0.115337348130128 0.105627413576726 -1.09192627391514 0.275191385104856 df.mm.trans1:probe9 -0.163001857123069 0.105627413576726 -1.54317758623018 0.123179716696881 df.mm.trans1:probe10 -0.055600826591555 0.105627413576726 -0.526386330108966 0.598764447780927 df.mm.trans1:probe11 -0.0994898240840543 0.105627413576726 -0.941893971604125 0.346528793694105 df.mm.trans1:probe12 -0.0777236129087583 0.105627413576726 -0.73582804195334 0.462049165032381 df.mm.trans1:probe13 -0.0392840738746973 0.105627413576726 -0.371911727689535 0.710056206666987 df.mm.trans1:probe14 -0.203428734538181 0.105627413576726 -1.92590850849920 0.0544668118397908 . df.mm.trans1:probe15 -0.159528521949907 0.105627413576726 -1.51029469100867 0.131359679566995 df.mm.trans1:probe16 -0.261488240726317 0.105627413576726 -2.47557174668843 0.0135065401579275 * df.mm.trans1:probe17 -0.0534310519802098 0.105627413576726 -0.505844554656241 0.613103919456546 df.mm.trans1:probe18 -0.0533785916386303 0.105627413576726 -0.505347900049231 0.613452490404152 df.mm.trans1:probe19 -0.00517639232218935 0.105627413576726 -0.0490061447772673 0.96092652478552 df.mm.trans1:probe20 0.0210405220328652 0.105627413576726 0.199195656888650 0.842159873124242 df.mm.trans1:probe21 -0.0375969456253085 0.105627413576726 -0.355939280838288 0.721979063412125 df.mm.trans2:probe2 -0.151701484199698 0.105627413576726 -1.43619425168926 0.151334595208026 df.mm.trans2:probe3 -0.235722905396968 0.105627413576726 -2.23164515171757 0.0259122897185456 * df.mm.trans2:probe4 0.0137503377573224 0.105627413576726 0.130177737878002 0.896458248216334 df.mm.trans2:probe5 -0.147721925564798 0.105627413576726 -1.39851881782086 0.162341492392135 df.mm.trans2:probe6 -0.134551359770997 0.105627413576726 -1.27382991985561 0.203090441944846 df.mm.trans3:probe2 0.063926862924615 0.105627413576726 0.605210908418006 0.54520901555819 df.mm.trans3:probe3 -0.088201860201732 0.105627413576726 -0.835028116424182 0.403949011091152 df.mm.trans3:probe4 -0.00380996565848082 0.105627413576726 -0.0360698565785984 0.971235577663017 df.mm.trans3:probe5 -0.0796354839685577 0.105627413576726 -0.753928182769632 0.451112263946548 df.mm.trans3:probe6 -0.138239483939269 0.105627413576726 -1.30874627389086 0.190992881684672 df.mm.trans3:probe7 -0.0519481295170451 0.105627413576726 -0.491805372847747 0.622990681273271 df.mm.trans3:probe8 -0.0142467199550606 0.105627413576726 -0.134877106923686 0.892742672406925 df.mm.trans3:probe9 0.0792759718354892 0.105627413576726 0.750524595377924 0.453157585568117