fitVsDatCorrelation=0.83568247941335 cont.fitVsDatCorrelation=0.268873738925648 fstatistic=10468.7911159903,65,991 cont.fstatistic=3393.53562338689,65,991 residuals=-0.485977111591721,-0.0923868218966118,-0.00316298424135673,0.081464328687005,1.02979041056684 cont.residuals=-0.606095051983207,-0.190557540855391,-0.0500214425181144,0.143653766204142,1.31001607975523 predictedValues: Include Exclude Both Lung 48.6359330613166 49.619397103052 62.7487925112563 cerebhem 56.8420708747791 61.0326091114228 53.6004816510369 cortex 51.2402743693649 48.0226137127195 70.1689409038637 heart 55.7565974922809 49.8107962644226 91.2884414159256 kidney 51.4449262353686 49.7728998434475 72.3822459583632 liver 49.8837885452436 55.2953859701796 59.9710619996719 stomach 55.2388549466644 50.508348710039 58.7145001876216 testicle 53.2407815239015 53.341641333658 58.318834894102 diffExp=-0.983464041735381,-4.19053823664375,3.21766065664538,5.94580122785825,1.67202639192116,-5.41159742493601,4.7305062366254,-0.100859809756564 diffExpScore=4.46505616961510 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,0 diffExp1.3Score=0 diffExp1.2=0,0,0,0,0,0,0,0 diffExp1.2Score=0 cont.predictedValues: Include Exclude Both Lung 54.3808045563035 53.1419357095028 55.2330384250519 cerebhem 52.9625681316226 63.4046022736916 59.2383743263101 cortex 57.1562179871241 60.4493303779898 59.0305914001596 heart 54.9356943193116 60.6740941585726 62.7750450707953 kidney 59.9472385814891 55.6976022295191 58.8543237860071 liver 55.7987832978301 65.9622254903139 60.4067164679608 stomach 59.940929784154 66.0277103179422 60.6085485345065 testicle 55.595943957862 65.5628554162857 53.3996517017417 cont.diffExp=1.23886884680061,-10.4420341420690,-3.29311239086578,-5.73839983926096,4.24963635197002,-10.1634421924838,-6.08678053378826,-9.96691145842369 cont.diffExpScore=1.24214766115680 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.413218443879467 cont.tran.correlation=0.00208808804692384 tran.covariance=0.00175131154586421 cont.tran.covariance=9.56357658313483e-06 tran.mean=52.4804324436163 cont.tran.mean=58.8524085368447 weightedLogRatios: wLogRatio Lung -0.0779622428999204 cerebhem -0.289921040442312 cortex 0.253195700176044 heart 0.447065669111563 kidney 0.129653324375596 liver -0.407976701855461 stomach 0.355148683439928 testicle -0.00752461078912484 cont.weightedLogRatios: wLogRatio Lung 0.0918220180673905 cerebhem -0.730522241093757 cortex -0.228203157781644 heart -0.40296196710643 kidney 0.298279973490834 liver -0.686960160722415 stomach -0.400565888276001 testicle -0.676178448609115 varWeightedLogRatios=0.0919117209414578 cont.varWeightedLogRatios=0.142839750086447 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.76380818881173 0.0728491152561706 51.6658050763756 1.99945665489552e-283 *** df.mm.trans1 -0.000101705282213162 0.0623362304030904 -0.00163155971343624 0.99869853264548 df.mm.trans2 0.159588453644547 0.0545070450515633 2.92785003284579 0.00349120946861902 ** df.mm.exp2 0.52052186479943 0.0688279975189276 7.56264723023922 8.99064715860616e-14 *** df.mm.exp3 -0.0923130393159355 0.0688279975189276 -1.34121349804706 0.180158440680720 df.mm.exp4 -0.234401796585848 0.0688279975189276 -3.40561697325841 0.000686638301579892 *** df.mm.exp5 -0.083583663761365 0.0688279975189276 -1.21438465122249 0.224890167537434 df.mm.exp6 0.178918279906774 0.0688279975189276 2.59949855227986 0.00947480993613347 ** df.mm.exp7 0.211513410926528 0.0688279975189276 3.07307227510669 0.00217658435511737 ** df.mm.exp8 0.236011738386592 0.0688279975189276 3.42900777146232 0.000630738593251631 *** df.mm.trans1:exp2 -0.364607749942082 0.062874394894645 -5.79898622568112 8.96515173126068e-09 *** df.mm.trans2:exp2 -0.3134953957724 0.0431537519702184 -7.26461504410443 7.56631970638553e-13 *** df.mm.trans1:exp3 0.144476249809959 0.062874394894645 2.29785511338994 0.0217776044919076 * df.mm.trans2:exp3 0.0596032303883523 0.0431537519702184 1.38118304126803 0.167534038371252 df.mm.trans1:exp4 0.37103491947953 0.062874394894645 5.90120859375668 4.94958430256485e-09 *** df.mm.trans2:exp4 0.238251721669908 0.0431537519702184 5.52099668724824 4.30507618019008e-08 *** df.mm.trans1:exp5 0.139732884620314 0.062874394894645 2.22241319148210 0.0264804744359839 * df.mm.trans2:exp5 0.0866724919131832 0.0431537519702184 2.00845785026985 0.0448655796883669 * df.mm.trans1:exp6 -0.153584829900259 0.062874394894645 -2.44272458061206 0.0147506178821586 * df.mm.trans2:exp6 -0.0706106391121836 0.0431537519702184 -1.63625724041131 0.102103280494857 df.mm.trans1:exp7 -0.0842094324128865 0.062874394894645 -1.33932791804981 0.180771028306174 df.mm.trans2:exp7 -0.193756595227096 0.0431537519702184 -4.4899130754798 7.96202728894385e-06 *** df.mm.trans1:exp8 -0.145549686819116 0.062874394894645 -2.31492783450251 0.0208204535779402 * df.mm.trans2:exp8 -0.163676276855197 0.0431537519702184 -3.7928631783432 0.000157932063245073 *** df.mm.trans1:probe2 0.366609346387975 0.0464358180720312 7.89496904780036 7.66883727137307e-15 *** df.mm.trans1:probe3 0.100070562965871 0.0464358180720312 2.15502961120749 0.0313998377224118 * df.mm.trans1:probe4 0.597177144034215 0.0464358180720312 12.8602696975829 4.07810906500299e-35 *** df.mm.trans1:probe5 0.367265377972111 0.0464358180720312 7.90909675376903 6.89306506297513e-15 *** df.mm.trans1:probe6 0.301996675105216 0.0464358180720312 6.50352869064909 1.24225112542164e-10 *** df.mm.trans1:probe7 0.502792287901587 0.0464358180720312 10.8276823533432 6.70875802702558e-26 *** df.mm.trans1:probe8 0.269105287390778 0.0464358180720312 5.79520935699553 9.1624898804541e-09 *** df.mm.trans1:probe9 0.250740816929313 0.0464358180720312 5.39972864353039 8.3552914539514e-08 *** df.mm.trans1:probe10 0.371253126932321 0.0464358180720312 7.99497332762466 3.59214537740622e-15 *** df.mm.trans1:probe11 0.0517393709885673 0.0464358180720312 1.11421254403894 0.265458168020198 df.mm.trans1:probe12 0.52967248137664 0.0464358180720312 11.4065500160891 2.09947939736301e-28 *** df.mm.trans1:probe13 0.331528245084138 0.0464358180720312 7.1394940123564 1.80999587246552e-12 *** df.mm.trans1:probe14 0.124174035829534 0.0464358180720312 2.67410031706377 0.00761630507901905 ** df.mm.trans1:probe15 0.210043648088061 0.0464358180720312 4.52331103033958 6.82455687233436e-06 *** df.mm.trans1:probe16 0.0485777216984654 0.0464358180720312 1.04612610944232 0.295757900994342 df.mm.trans1:probe17 0.0433276967670792 0.0464358180720312 0.933066295932793 0.351013012495954 df.mm.trans1:probe18 0.0336428028301327 0.0464358180720312 0.724501133541915 0.468929141346762 df.mm.trans1:probe19 -0.0440739716601933 0.0464358180720312 -0.9491374006123 0.342782133193553 df.mm.trans1:probe20 0.0155730974209949 0.0464358180720312 0.335368215045504 0.737418321481177 df.mm.trans1:probe21 0.0957717796547261 0.0464358180720312 2.06245488140566 0.0394246152628294 * df.mm.trans1:probe22 0.0179456944958878 0.0464358180720312 0.386462331040457 0.699237256114585 df.mm.trans2:probe2 -0.097839302936944 0.0464358180720312 -2.10697920267445 0.0353701963396474 * df.mm.trans2:probe3 -0.0850216550886587 0.0464358180720312 -1.83094987056701 0.0674081566006095 . df.mm.trans2:probe4 -0.0693385746604634 0.0464358180720312 -1.49321316042942 0.135699693099728 df.mm.trans2:probe5 -0.00887584395224647 0.0464358180720312 -0.191142189817315 0.848453346551268 df.mm.trans2:probe6 -0.157250543407454 0.0464358180720312 -3.38640622554612 0.000735961944306128 *** df.mm.trans3:probe2 0.269035893085800 0.0464358180720312 5.79371494367712 9.2417338669923e-09 *** df.mm.trans3:probe3 0.151190812657018 0.0464358180720312 3.25590931600453 0.00116860640014874 ** df.mm.trans3:probe4 0.485015007261093 0.0464358180720312 10.4448468315716 2.67664655545604e-24 *** df.mm.trans3:probe5 0.0627433361600833 0.0464358180720312 1.35118403777782 0.17694486930742 df.mm.trans3:probe6 0.0508215786985774 0.0464358180720312 1.09444779501339 0.274024566371847 df.mm.trans3:probe7 -0.0987156002271514 0.0464358180720312 -2.12585035271746 0.0337624593348053 * df.mm.trans3:probe8 -0.0143309793354608 0.0464358180720312 -0.308619077480892 0.75767617044651 df.mm.trans3:probe9 0.262679739615573 0.0464358180720312 5.65683454113167 2.01697227334946e-08 *** df.mm.trans3:probe10 0.441646385915656 0.0464358180720312 9.51089922073893 1.38286365326885e-20 *** df.mm.trans3:probe11 0.122310897994249 0.0464358180720312 2.6339774568959 0.00857063951469796 ** df.mm.trans3:probe12 0.489093569133873 0.0464358180720312 10.5326790706086 1.15948368742537e-24 *** df.mm.trans3:probe13 0.78056421771209 0.0464358180720312 16.8095287241689 5.57907278525275e-56 *** df.mm.trans3:probe14 -0.0215707881796648 0.0464358180720312 -0.464529087141401 0.642370760890657 df.mm.trans3:probe15 0.198521582644006 0.0464358180720312 4.2751821952627 2.09429676770380e-05 *** df.mm.trans3:probe16 0.274504711731084 0.0464358180720312 5.91148650176191 4.66025287848402e-09 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.79859682508426 0.127758251670441 29.7326926082468 2.21386941395275e-139 *** df.mm.trans1 0.143099055994966 0.109321407460059 1.30897560980678 0.190846055015355 df.mm.trans2 0.174285419915615 0.0955910686769781 1.82323958009677 0.0685682540445359 . df.mm.exp2 0.0801360013728266 0.120706265245285 0.663892642274896 0.506913446474978 df.mm.exp3 0.112121573362519 0.120706265245285 0.928879483883287 0.35317773657936 df.mm.exp4 0.0147062020732318 0.120706265245285 0.121834620956481 0.903054694662108 df.mm.exp5 0.0809203101340093 0.120706265245285 0.670390306332258 0.502765204125653 df.mm.exp6 0.152317699005896 0.120706265245285 1.26188726572207 0.207286267560992 df.mm.exp7 0.221581828838174 0.120706265245285 1.83571108250182 0.0666998930060005 . df.mm.exp8 0.265899027856732 0.120706265245285 2.20286020213121 0.0278341564771541 * df.mm.trans1:exp2 -0.106561833180643 0.110265206905122 -0.966413941183945 0.334072868761061 df.mm.trans2:exp2 0.0964340822356026 0.075680368736777 1.27422849340241 0.202881174945775 df.mm.trans1:exp3 -0.0623446220377697 0.110265206905122 -0.565406113021798 0.57192554878139 df.mm.trans2:exp3 0.0167175600819086 0.075680368736777 0.220896916346348 0.82521820090898 df.mm.trans1:exp4 -0.00455412924804027 0.110265206905122 -0.0413015979914576 0.967063778472447 df.mm.trans2:exp4 0.117844253758792 0.075680368736777 1.55713107277086 0.119758646955451 df.mm.trans1:exp5 0.0165332740795791 0.110265206905122 0.149940988128786 0.880841683581325 df.mm.trans2:exp5 -0.0339495783392006 0.075680368736777 -0.448591608443138 0.65382435538577 df.mm.trans1:exp6 -0.126576868726919 0.110265206905122 -1.14793117683832 0.251274005995484 df.mm.trans2:exp6 0.0637981718471784 0.075680368736777 0.842994992123704 0.399434658323461 df.mm.trans1:exp7 -0.124233489327660 0.110265206905122 -1.12667896623598 0.260150981998323 df.mm.trans2:exp7 -0.00447368789116589 0.075680368736777 -0.0591129240758031 0.952874082353282 df.mm.trans1:exp8 -0.243800013831546 0.110265206905122 -2.21103302369281 0.0272612379447804 * df.mm.trans2:exp8 -0.0558560869526498 0.075680368736777 -0.738052521214877 0.460657265916751 df.mm.trans1:probe2 0.152823715698308 0.0814362523265768 1.87660545926711 0.0608658553619823 . df.mm.trans1:probe3 0.181408331500606 0.0814362523265768 2.22761149141686 0.0261303184988788 * df.mm.trans1:probe4 0.0591307379607028 0.0814362523265768 0.72609846685449 0.467949857334569 df.mm.trans1:probe5 0.0744383557860494 0.0814362523265768 0.914069025273114 0.360902913772132 df.mm.trans1:probe6 0.000351361803283109 0.0814362523265768 0.00431456253504978 0.99655835619718 df.mm.trans1:probe7 0.077323267100351 0.0814362523265768 0.949494419147238 0.342600698821547 df.mm.trans1:probe8 0.159680836993730 0.0814362523265768 1.96080777825305 0.0501812208666612 . df.mm.trans1:probe9 0.154335047437215 0.0814362523265768 1.89516392304374 0.0583615020833137 . df.mm.trans1:probe10 0.0933917489683814 0.0814362523265768 1.14680804064829 0.25173777247663 df.mm.trans1:probe11 0.136434985989088 0.0814362523265768 1.67535934048087 0.0941792163861506 . df.mm.trans1:probe12 0.138431793020131 0.0814362523265768 1.69987921920805 0.0894674408591343 . df.mm.trans1:probe13 0.00495910747031084 0.0814362523265768 0.0608955757249702 0.951454651302226 df.mm.trans1:probe14 0.0461151163224924 0.0814362523265768 0.566272575235423 0.571336710186074 df.mm.trans1:probe15 0.113822233311586 0.0814362523265768 1.39768506113388 0.162520448795611 df.mm.trans1:probe16 0.0286734237622342 0.0814362523265768 0.352096553353752 0.724840711946949 df.mm.trans1:probe17 0.129099505859921 0.0814362523265768 1.58528299340452 0.113221076892171 df.mm.trans1:probe18 0.0996113957786555 0.0814362523265768 1.22318246398658 0.221551567423883 df.mm.trans1:probe19 0.17164722208697 0.0814362523265768 2.107749524114 0.0353033098525242 * df.mm.trans1:probe20 0.0690679462368563 0.0814362523265768 0.848122847793622 0.396574356965461 df.mm.trans1:probe21 0.0317750799668981 0.0814362523265768 0.390183475529709 0.696484728871588 df.mm.trans1:probe22 0.141462204478522 0.0814362523265768 1.73709128842556 0.0826817629816043 . df.mm.trans2:probe2 0.0184173231606135 0.0814362523265768 0.226156320243669 0.821126477221254 df.mm.trans2:probe3 0.0705291984474141 0.0814362523265768 0.866066357825221 0.386663395950789 df.mm.trans2:probe4 -0.0353570124830565 0.0814362523265768 -0.434167971547454 0.664260977095968 df.mm.trans2:probe5 -0.0086722420136343 0.0814362523265768 -0.106491172737870 0.91521421131425 df.mm.trans2:probe6 -0.0430665992160825 0.0814362523265768 -0.528838176926122 0.59703613256403 df.mm.trans3:probe2 -0.207254347634374 0.0814362523265768 -2.54498876990605 0.0110787669742794 * df.mm.trans3:probe3 -0.134215843036132 0.0814362523265768 -1.64810927813694 0.0996472271600446 . df.mm.trans3:probe4 -0.110731969325852 0.0814362523265768 -1.35973803020544 0.174222114575669 df.mm.trans3:probe5 -0.169372024707473 0.0814362523265768 -2.07981113900299 0.0377994271546437 * df.mm.trans3:probe6 -0.0293381273803504 0.0814362523265768 -0.360258810323175 0.718730365591921 df.mm.trans3:probe7 -0.110996902050822 0.0814362523265768 -1.36299128311677 0.173194863378097 df.mm.trans3:probe8 -0.0703167515643712 0.0814362523265768 -0.863457607091077 0.388094841730724 df.mm.trans3:probe9 -0.122724412148975 0.0814362523265768 -1.50699975309305 0.132129410961887 df.mm.trans3:probe10 -0.109301237561244 0.0814362523265768 -1.34216929731642 0.179848510980388 df.mm.trans3:probe11 -0.110574452834094 0.0814362523265768 -1.35780379959857 0.174835025988089 df.mm.trans3:probe12 -0.204457569463564 0.0814362523265768 -2.51064561079807 0.0122093509864013 * df.mm.trans3:probe13 -0.135881189168502 0.0814362523265768 -1.6685589683522 0.095520695340266 . df.mm.trans3:probe14 -0.0245868946723444 0.0814362523265768 -0.301915841777021 0.762779565900257 df.mm.trans3:probe15 -0.0875174620958056 0.0814362523265768 -1.07467447967573 0.282782078101060 df.mm.trans3:probe16 -0.0434508893447 0.0814362523265768 -0.533557084263316 0.593767651855575