fitVsDatCorrelation=0.868939569846446 cont.fitVsDatCorrelation=0.242732771785958 fstatistic=11272.3951196979,62,922 cont.fstatistic=2922.97280773318,62,922 residuals=-0.526044114804564,-0.0857827453841879,-0.00886831747965998,0.0813847039519111,1.19082515940032 cont.residuals=-0.793372227421756,-0.238826256563892,-0.00812401786527586,0.209066956941177,1.71125388150463 predictedValues: Include Exclude Both Lung 57.5252447385196 85.363793969173 63.894144777059 cerebhem 63.3662376652138 90.7326854228633 65.0690723749205 cortex 54.6522941034188 71.075292166974 65.8049236868544 heart 57.6793056591208 74.1977869277803 73.5425964145172 kidney 59.5805080265067 88.118232093797 88.665749875155 liver 61.341006873312 89.6712355286354 98.4976784678093 stomach 60.0326695135262 77.3279393826943 73.2668867419458 testicle 57.0457304362237 78.0602187699999 85.0209291832586 diffExp=-27.8385492306534,-27.3664477576496,-16.4229980635553,-16.5184812686596,-28.5377240672902,-28.3302286553233,-17.2952698691681,-21.0144883337762 diffExpScore=0.994574776024022 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=-1,-1,0,0,-1,-1,0,0 diffExp1.4Score=0.8 diffExp1.3=-1,-1,-1,0,-1,-1,0,-1 diffExp1.3Score=0.857142857142857 diffExp1.2=-1,-1,-1,-1,-1,-1,-1,-1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 69.1678247391187 63.4418852189206 72.8638446398894 cerebhem 68.5083126799186 65.4339072550024 62.266308563512 cortex 70.0081528531812 76.2757686411759 65.7835034423067 heart 69.1568532792222 67.3717698645781 70.4788610085784 kidney 69.8799781800628 63.1315045257916 73.0615409149708 liver 68.2077476718535 69.2547875679801 74.9551081159922 stomach 67.4879958876864 70.2637189866503 67.6169626459033 testicle 70.2935887601543 69.0168907076393 66.2333885348292 cont.diffExp=5.72593952019811,3.07440542491616,-6.26761578799464,1.78508341464409,6.74847365427127,-1.04703989612659,-2.77572309896385,1.27669805251503 cont.diffExpScore=3.01473862792399 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.793794776028427 cont.tran.correlation=0.0460931695271221 tran.covariance=0.00344511864034979 cont.tran.covariance=2.31030533732168e-05 tran.mean=70.3606363298599 cont.tran.mean=68.5562929261835 weightedLogRatios: wLogRatio Lung -1.67729864245892 cerebhem -1.55384580542565 cortex -1.08577314691023 heart -1.05287952801340 kidney -1.67615782197451 liver -1.63510817895483 stomach -1.06873500564164 testicle -1.31744394308266 cont.weightedLogRatios: wLogRatio Lung 0.362351941710197 cerebhem 0.193024489098838 cortex -0.367967258849164 heart 0.110443878324403 kidney 0.426142561862937 liver -0.0644429825644977 stomach -0.170578426667867 testicle 0.0777807990486707 varWeightedLogRatios=0.0808117314694489 cont.varWeightedLogRatios=0.0709858523205767 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.01418183674986 0.072839856748371 55.109688787789 5.33319356240362e-294 *** df.mm.trans1 -0.0555306638803094 0.0625569709722682 -0.88768146886342 0.374943618030051 df.mm.trans2 0.427180808116191 0.0549290519744162 7.77695577770311 1.98347063729656e-14 *** df.mm.exp2 0.139481276835881 0.0698901994216392 1.99572011512526 0.0462582109417836 * df.mm.exp3 -0.263881920463154 0.0698901994216392 -3.77566415100902 0.000169796420857905 *** df.mm.exp4 -0.278150219275526 0.0698901994216392 -3.97981722154603 7.43839200679956e-05 *** df.mm.exp5 -0.260783963937784 0.0698901994216392 -3.73133810027506 0.000202114265974314 *** df.mm.exp6 -0.319352579303052 0.0698901994216392 -4.56934708937424 5.55747642602557e-06 *** df.mm.exp7 -0.193082736841902 0.0698901994216392 -2.76265826166923 0.00584737375933908 ** df.mm.exp8 -0.383481869926718 0.0698901994216392 -5.48691909738614 5.28541962208181e-08 *** df.mm.trans1:exp2 -0.0427739765611307 0.0641598858075587 -0.66667787859578 0.505144702310484 df.mm.trans2:exp2 -0.0784856688253079 0.0454762964398555 -1.72585885328434 0.0847078415250824 . df.mm.trans1:exp3 0.212649221924603 0.0641598858075587 3.31436409600888 0.000954314360357552 *** df.mm.trans2:exp3 0.0806996359848695 0.0454762964398555 1.77454283445440 0.076303322826374 . df.mm.trans1:exp4 0.280824783985103 0.0641598858075588 4.37695267768103 1.34109575318503e-05 *** df.mm.trans2:exp4 0.137962490540479 0.0454762964398555 3.03372308963068 0.00248326442996371 ** df.mm.trans1:exp5 0.295888547597898 0.0641598858075588 4.61173744113863 4.5566532941007e-06 *** df.mm.trans2:exp5 0.29254137049296 0.0454762964398555 6.43283190133699 2.00918793835668e-10 *** df.mm.trans1:exp6 0.383577262098247 0.0641598858075588 5.978459239294 3.2173641021864e-09 *** df.mm.trans2:exp6 0.3685805700972 0.0454762964398555 8.10489417458753 1.66965776049075e-15 *** df.mm.trans1:exp7 0.235747752389493 0.0641598858075587 3.67437923902476 0.000252173576540859 *** df.mm.trans2:exp7 0.0942160153533606 0.0454762964398555 2.07176095524766 0.0385653246827012 * df.mm.trans1:exp8 0.375111214070111 0.0641598858075587 5.84650688430494 6.96296898683254e-09 *** df.mm.trans2:exp8 0.294040381570581 0.0454762964398555 6.46579437178802 1.63174730197987e-10 *** df.mm.trans1:probe2 0.188683373856440 0.0459609598244332 4.10529663821629 4.39605195662907e-05 *** df.mm.trans1:probe3 0.0408237799382675 0.0459609598244332 0.888227314969286 0.37465014546991 df.mm.trans1:probe4 0.0507135084653196 0.0459609598244332 1.1034040337504 0.270139648744246 df.mm.trans1:probe5 -0.117020105749740 0.0459609598244332 -2.54607619590076 0.0110558309480838 * df.mm.trans1:probe6 -0.119226532413743 0.0459609598244332 -2.59408273606944 0.0096348353353752 ** df.mm.trans1:probe7 -0.171477500290833 0.0459609598244332 -3.73093819071364 0.000202430590722494 *** df.mm.trans1:probe8 -0.0400934523270038 0.0459609598244332 -0.872337141786361 0.383251591242981 df.mm.trans1:probe9 -0.0880923058900505 0.0459609598244332 -1.91667681063571 0.0555878680811851 . df.mm.trans1:probe10 0.453804686381393 0.0459609598244332 9.87369907231892 6.32775788187274e-22 *** df.mm.trans1:probe11 0.405346359726265 0.0459609598244332 8.81936237351553 5.66687137869301e-18 *** df.mm.trans1:probe12 0.845511945855999 0.0459609598244332 18.3963074114592 1.27780830147714e-64 *** df.mm.trans1:probe13 0.438614224055409 0.0459609598244332 9.54319112853335 1.19845332374990e-20 *** df.mm.trans1:probe14 0.500232756496572 0.0459609598244332 10.8838622693568 4.87583413493828e-26 *** df.mm.trans1:probe15 0.386721182219142 0.0459609598244332 8.41412328411728 1.49674639973177e-16 *** df.mm.trans1:probe16 0.53651400233077 0.0459609598244332 11.6732549620418 1.83815176703465e-29 *** df.mm.trans1:probe17 -0.118270480340123 0.0459609598244332 -2.57328134120579 0.0102292191748289 * df.mm.trans1:probe18 0.185300352625274 0.0459609598244332 4.03169022868768 5.99514224267501e-05 *** df.mm.trans1:probe19 -0.0803977898071237 0.0459609598244332 -1.74926263755666 0.0805783507165504 . df.mm.trans1:probe20 0.0708857692353633 0.0459609598244332 1.54230393590866 0.123342882662768 df.mm.trans1:probe21 -0.106970712917236 0.0459609598244332 -2.32742556565082 0.0201583111318645 * df.mm.trans1:probe22 0.0134420515794796 0.0459609598244332 0.292466728954901 0.769995595894796 df.mm.trans2:probe2 0.0582245566635831 0.0459609598244332 1.26682638669853 0.205537290011977 df.mm.trans2:probe3 0.058699840461677 0.0459609598244332 1.27716741960797 0.201864673704141 df.mm.trans2:probe4 -0.138369339496186 0.0459609598244332 -3.01058420069434 0.0026785029169541 ** df.mm.trans2:probe5 0.198460799548821 0.0459609598244332 4.31802991728031 1.74479001268225e-05 *** df.mm.trans2:probe6 -0.0713871084766737 0.0459609598244332 -1.55321187262769 0.120715695534607 df.mm.trans3:probe2 -0.126845568976268 0.0459609598244332 -2.75985465623014 0.00589736717456525 ** df.mm.trans3:probe3 -0.089051450079288 0.0459609598244332 -1.93754548250203 0.0529837952364368 . df.mm.trans3:probe4 -0.15640151222569 0.0459609598244332 -3.40292093165874 0.000695391945238197 *** df.mm.trans3:probe5 -0.141925612995760 0.0459609598244332 -3.08796016310153 0.00207566909706057 ** df.mm.trans3:probe6 -0.128454123493119 0.0459609598244332 -2.79485293570462 0.0053001019291309 ** df.mm.trans3:probe7 -0.270987232038748 0.0459609598244332 -5.89603074160974 5.22062142995535e-09 *** df.mm.trans3:probe8 -0.204015509456144 0.0459609598244332 -4.43888705186892 1.01362053260227e-05 *** df.mm.trans3:probe9 -0.570611449223285 0.0459609598244332 -12.4151334394010 7.74374635803634e-33 *** df.mm.trans3:probe10 -0.303378794275025 0.0459609598244332 -6.60079326963374 6.8922500534494e-11 *** df.mm.trans3:probe11 -0.154354207662136 0.0459609598244332 -3.35837650588142 0.000816126927555224 *** df.mm.trans3:probe12 -0.567980557085537 0.0459609598244332 -12.3578915508982 1.42771864434544e-32 *** df.mm.trans3:probe13 -0.257849295312438 0.0459609598244332 -5.6101808207966 2.67214608253113e-08 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.0627081761415 0.142773996302141 28.4555190816675 2.4385948048932e-128 *** df.mm.trans1 0.179722793758604 0.122618428165258 1.46570785849892 0.143068828908142 df.mm.trans2 0.075491720094917 0.107666882028167 0.701160084446095 0.483380038714298 df.mm.exp2 0.178507658731049 0.136992348958789 1.30304838253959 0.192883567882911 df.mm.exp3 0.298530383208062 0.136992348958789 2.17917559248414 0.0295711452023692 * df.mm.exp4 0.093222895226028 0.136992348958789 0.680497092973216 0.496360605664151 df.mm.exp5 0.00262945521985648 0.136992348958789 0.0191941757320148 0.98469035662814 df.mm.exp6 0.0453935321387089 0.136992348958789 0.331358156011797 0.740449265982894 df.mm.exp7 0.152278912446320 0.136992348958789 1.11158698718372 0.266605540610806 df.mm.exp8 0.195779639699328 0.136992348958789 1.42912827750858 0.153306075600142 df.mm.trans1:exp2 -0.188088361912688 0.125760314585449 -1.49560982359733 0.135097553377249 df.mm.trans2:exp2 -0.147591368515652 0.089138458936964 -1.65575409622040 0.0981119099157542 . df.mm.trans1:exp3 -0.286454472688220 0.125760314585449 -2.27778113972183 0.0229677842538722 * df.mm.trans2:exp3 -0.114299368870752 0.089138458936964 -1.28226772409854 0.200071048299194 df.mm.trans1:exp4 -0.0933815286684001 0.125760314585449 -0.742535743300411 0.45795193348799 df.mm.trans2:exp4 -0.0331211032375704 0.089138458936964 -0.37156917039583 0.71029901743519 df.mm.trans1:exp5 0.00761392371862769 0.125760314585449 0.0605431351195795 0.951736182407568 df.mm.trans2:exp5 -0.00753382439070378 0.089138458936964 -0.0845182256968507 0.932662760323965 df.mm.trans1:exp6 -0.0593711655935972 0.125760314585449 -0.472097782112789 0.636968706373826 df.mm.trans2:exp6 0.0422744516440772 0.089138458936964 0.474256029868908 0.635429636879022 df.mm.trans1:exp7 -0.176864963162607 0.125760314585449 -1.40636546390343 0.159952569634478 df.mm.trans2:exp7 -0.0501476286831492 0.089138458936964 -0.562581284006852 0.573856796799351 df.mm.trans1:exp8 -0.179634837411011 0.125760314585449 -1.42839049030015 0.153518150333563 df.mm.trans2:exp8 -0.111552665645263 0.089138458936964 -1.25145382784943 0.211086369992442 df.mm.trans1:probe2 -0.0139269058734514 0.0900884515833872 -0.154591466815927 0.877177230742315 df.mm.trans1:probe3 -0.132833892825678 0.0900884515833872 -1.47448302741362 0.140692942039397 df.mm.trans1:probe4 -0.0930384800068553 0.0900884515833872 -1.03274591106428 0.301993635275934 df.mm.trans1:probe5 0.0347578491725951 0.0900884515833872 0.3858191428723 0.699719620740698 df.mm.trans1:probe6 0.00584434822378688 0.0900884515833872 0.064873445164914 0.948288826377816 df.mm.trans1:probe7 0.0490267381622117 0.0900884515833872 0.544206691318607 0.586430826404671 df.mm.trans1:probe8 0.00886385611710236 0.0900884515833872 0.0983905923712968 0.921643530424008 df.mm.trans1:probe9 -0.0965180189239093 0.0900884515833872 -1.0713694955071 0.284283684107878 df.mm.trans1:probe10 -0.0138148043464357 0.0900884515833872 -0.153347117234538 0.87815810052119 df.mm.trans1:probe11 0.0641668379885826 0.0900884515833872 0.712264855936489 0.476480977189524 df.mm.trans1:probe12 -0.076925256950431 0.0900884515833872 -0.853885882134714 0.393390013345661 df.mm.trans1:probe13 0.115304583682545 0.0900884515833872 1.27990415703635 0.200900790065167 df.mm.trans1:probe14 -0.0391537970564296 0.0900884515833872 -0.434615051854768 0.663943565051005 df.mm.trans1:probe15 0.0545663482248569 0.0900884515833872 0.605697481373065 0.544864725478417 df.mm.trans1:probe16 -0.145989232883713 0.0900884515833872 -1.62050995791157 0.105464709325404 df.mm.trans1:probe17 0.094743990805468 0.0900884515833872 1.05167742524436 0.293223123594487 df.mm.trans1:probe18 -0.0768630267789709 0.0900884515833872 -0.853195114668225 0.393772702848906 df.mm.trans1:probe19 0.0825291470702379 0.0900884515833872 0.916090193800785 0.359859129676211 df.mm.trans1:probe20 0.0611569798494968 0.0900884515833872 0.678854822950186 0.497400214545532 df.mm.trans1:probe21 -0.0548783559677669 0.0900884515833872 -0.609160830308762 0.542567906836276 df.mm.trans1:probe22 -0.0333500614340996 0.0900884515833872 -0.370192414765063 0.711324149479639 df.mm.trans2:probe2 -0.0929793733927835 0.0900884515833872 -1.03208981571540 0.302300691363922 df.mm.trans2:probe3 0.0716460827559812 0.0900884515833872 0.795285982795082 0.426651847779476 df.mm.trans2:probe4 0.0773846208567814 0.0900884515833872 0.858984914233463 0.3905721037164 df.mm.trans2:probe5 0.122315240026428 0.0900884515833872 1.35772385779338 0.174883515818678 df.mm.trans2:probe6 0.0481969768239135 0.0900884515833872 0.534996172947891 0.592781503139472 df.mm.trans3:probe2 -0.00668405999098106 0.0900884515833872 -0.0741944153052092 0.940871783026443 df.mm.trans3:probe3 -0.0876605576453928 0.0900884515833872 -0.973049887135122 0.330783717063771 df.mm.trans3:probe4 -0.0106848251944462 0.0900884515833872 -0.118603716754485 0.905615155087698 df.mm.trans3:probe5 0.00659084983348765 0.0900884515833872 0.0731597637393852 0.941694852291496 df.mm.trans3:probe6 -0.0144018270365403 0.0900884515833872 -0.159863187605236 0.873023862017715 df.mm.trans3:probe7 -0.112251931140184 0.0900884515833872 -1.24601909753419 0.213073895430744 df.mm.trans3:probe8 -0.0455892157078346 0.0900884515833872 -0.506049498093955 0.612942872602112 df.mm.trans3:probe9 -0.00801462412836294 0.0900884515833872 -0.0889639458498683 0.929129883594216 df.mm.trans3:probe10 -0.0288750170438053 0.0900884515833872 -0.320518518592565 0.748647921818623 df.mm.trans3:probe11 0.0192566990418496 0.0900884515833872 0.213753246985551 0.830786744514267 df.mm.trans3:probe12 -0.0718270489522281 0.0900884515833872 -0.797294744107616 0.42548514485226 df.mm.trans3:probe13 -0.0211501620521201 0.0900884515833872 -0.234771068659596 0.814438551274696