fitVsDatCorrelation=0.818382758693905 cont.fitVsDatCorrelation=0.282629096182784 fstatistic=8565.78867419877,52,692 cont.fstatistic=3065.90068879566,52,692 residuals=-0.484499533368278,-0.104769441421073,-0.00391156284091769,0.104223057951601,0.7497834249153 cont.residuals=-0.627413893258611,-0.200020414693681,-0.0192463445735925,0.170734703902567,1.05797672268894 predictedValues: Include Exclude Both Lung 66.5414353941569 55.8801994894513 66.9560643367104 cerebhem 68.8913125565408 58.8462652636357 59.6220869028327 cortex 76.3572663641222 49.8850843205046 80.0789135752527 heart 64.5385966173957 51.5044071419504 69.9401135277388 kidney 65.0154490532175 50.5113074158561 64.4350643313957 liver 65.2808816115285 53.0748937761054 59.3076687638646 stomach 78.8947334840337 50.5934545383278 70.3915155913442 testicle 102.089787816288 55.8399292254309 76.9564855045392 diffExp=10.6612359047056,10.0450472929051,26.4721820436176,13.0341894754453,14.5041416373615,12.2059878354231,28.3012789457059,46.2498585908569 diffExpScore=0.993845166108034 diffExp1.5=0,0,1,0,0,0,1,1 diffExp1.5Score=0.75 diffExp1.4=0,0,1,0,0,0,1,1 diffExp1.4Score=0.75 diffExp1.3=0,0,1,0,0,0,1,1 diffExp1.3Score=0.75 diffExp1.2=0,0,1,1,1,1,1,1 diffExp1.2Score=0.857142857142857 cont.predictedValues: Include Exclude Both Lung 66.9530107144555 62.4006433566885 63.9194893189518 cerebhem 64.997873976498 72.1049742474908 75.0341944769275 cortex 65.9059343016716 72.9262552390199 65.6775576463191 heart 69.0859866626799 68.8574674507994 69.253179314594 kidney 70.1625603257145 66.3379285448003 71.775584878117 liver 71.9923291339479 73.644596546671 65.4083401594913 stomach 62.7443869448994 59.9939587046217 66.0964311161023 testicle 69.4602658367514 61.3137038394588 71.9570780202493 cont.diffExp=4.55236735776692,-7.10710027099279,-7.02032093734829,0.228519211880410,3.8246317809142,-1.65226741272306,2.75042824027771,8.1465619972926 cont.diffExpScore=7.47057847964124 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.159336122081176 cont.tran.correlation=0.283243749415367 tran.covariance=0.00132844234822467 cont.tran.covariance=0.00109332264705413 tran.mean=63.3590627542841 cont.tran.mean=67.4301172391355 weightedLogRatios: wLogRatio Lung 0.717756931285843 cerebhem 0.65463483980187 cortex 1.75498391570047 heart 0.91467143190192 kidney 1.02193109080091 liver 0.84354721099573 stomach 1.84202166767175 testicle 2.60904694954826 cont.weightedLogRatios: wLogRatio Lung 0.293546774609415 cerebhem -0.438550340396627 cortex -0.429056264564988 heart 0.0140272201180199 kidney 0.236700088496799 liver -0.0972977140421774 stomach 0.184530173213336 testicle 0.521259075208826 varWeightedLogRatios=0.486262887783991 cont.varWeightedLogRatios=0.117696268366687 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.17417130199822 0.0842063317807399 49.5707533355937 6.79225985701084e-230 *** df.mm.trans1 -0.063420384958429 0.0734093781277005 -0.863927560428383 0.387927032618415 df.mm.trans2 -0.105526571397534 0.0663041319483197 -1.59155347180755 0.111941752835274 df.mm.exp2 0.202434062568959 0.0876343561327888 2.30998516451948 0.0211823535141851 * df.mm.exp3 -0.154865621091406 0.0876343561327888 -1.76717931100839 0.0776389140276863 . df.mm.exp4 -0.155706831747669 0.0876343561327888 -1.77677840767989 0.0760439399506952 . df.mm.exp5 -0.0858341207733545 0.0876343561327888 -0.979457424703315 0.327696307160029 df.mm.exp6 0.0506663042339859 0.0876343561327888 0.578155719626824 0.563347083628909 df.mm.exp7 0.0208656501352306 0.0876343561327888 0.238098972321012 0.81187481526305 df.mm.exp8 0.288103452506745 0.0876343561327888 3.28756283745833 0.00106167210484200 ** df.mm.trans1:exp2 -0.167728822469178 0.081440392904415 -2.05952865018761 0.0398171633911169 * df.mm.trans2:exp2 -0.150715797180716 0.0660568813720094 -2.28160630732681 0.0228154635699224 * df.mm.trans1:exp3 0.292463977734105 0.081440392904415 3.59114153682147 0.000352526932603924 *** df.mm.trans2:exp3 0.0413775634092906 0.0660568813720094 0.626392929091922 0.531263814330792 df.mm.trans1:exp4 0.125145431493506 0.081440392904415 1.53665063527366 0.124835968938251 df.mm.trans2:exp4 0.0741641069838962 0.0660568813720094 1.12273097735616 0.261941146609739 df.mm.trans1:exp5 0.0626341979132981 0.081440392904415 0.769080252188993 0.442108080851259 df.mm.trans2:exp5 -0.0151787631283224 0.0660568813720094 -0.22978322338351 0.818328125083542 df.mm.trans1:exp6 -0.0697919308473873 0.081440392904415 -0.856969476182424 0.391758425601407 df.mm.trans2:exp6 -0.102172402382871 0.0660568813720094 -1.54673366742023 0.122384661012428 df.mm.trans1:exp7 0.149423983980356 0.081440392904415 1.83476501833349 0.066969623801836 . df.mm.trans2:exp7 -0.12025354350312 0.0660568813720094 -1.82045444782496 0.0691216226598007 . df.mm.trans1:exp8 0.139924404016806 0.081440392904415 1.71812044400415 0.086221971830954 . df.mm.trans2:exp8 -0.288824365850253 0.0660568813720094 -4.37235848637321 1.41810594312938e-05 *** df.mm.trans1:probe2 0.352157340844739 0.0498718517668991 7.06124453711327 4.02526905934103e-12 *** df.mm.trans1:probe3 0.0247400734967364 0.0498718517668991 0.496072887214443 0.620000506810473 df.mm.trans1:probe4 -0.110500037498751 0.0498718517668991 -2.21567945812856 0.0270381641114486 * df.mm.trans1:probe5 0.288915341568668 0.0498718517668991 5.79315448159128 1.04879665403286e-08 *** df.mm.trans1:probe6 0.059920253265047 0.0498718517668991 1.20148442743041 0.229974380629325 df.mm.trans1:probe7 0.0879943467327963 0.0498718517668991 1.76440905270736 0.0781042609999633 . df.mm.trans1:probe8 0.233290858503141 0.0498718517668991 4.67780622210585 3.48789036098941e-06 *** df.mm.trans1:probe9 0.161286884797534 0.0498718517668991 3.23402639130764 0.00127858616578447 ** df.mm.trans1:probe10 0.0665484353103149 0.0498718517668991 1.33438869728283 0.182515418336411 df.mm.trans1:probe11 0.257178522133563 0.0498718517668991 5.15678710579295 3.28334614805449e-07 *** df.mm.trans1:probe12 0.0295870324764485 0.0498718517668991 0.593261156909476 0.553200232682836 df.mm.trans1:probe13 0.195056851012779 0.0498718517668991 3.91116118816830 0.000100907660365805 *** df.mm.trans1:probe14 0.00476928479008865 0.0498718517668991 0.0956307941477744 0.923841493100186 df.mm.trans1:probe15 0.182950967900419 0.0498718517668991 3.66842139240250 0.000262796924420603 *** df.mm.trans1:probe16 0.118490570528367 0.0498718517668991 2.37590076025634 0.0177774600111602 * df.mm.trans1:probe17 0.164501595464744 0.0498718517668991 3.29848581186886 0.00102183559987171 ** df.mm.trans1:probe18 0.0496863012055608 0.0498718517668991 0.996279453143116 0.319462623903393 df.mm.trans1:probe19 0.0102735078884574 0.0498718517668991 0.205998123680583 0.836852965516113 df.mm.trans2:probe2 -0.123017575362408 0.0498718517668991 -2.46667350427235 0.0138786620196556 * df.mm.trans2:probe3 -0.0938694689542438 0.0498718517668991 -1.88221342558101 0.0602264236644983 . df.mm.trans2:probe4 -0.0618516723597765 0.0498718517668991 -1.24021206689639 0.215317320073588 df.mm.trans2:probe5 -0.156130027893042 0.0498718517668991 -3.13062423715071 0.00181775255135175 ** df.mm.trans2:probe6 -0.110346770511605 0.0498718517668991 -2.21260624184090 0.0272505121826232 * df.mm.trans3:probe2 0.177211171968622 0.0498718517668991 3.5533304998761 0.00040622767127441 *** df.mm.trans3:probe3 0.308495035262719 0.0498718517668991 6.18575457563966 1.05723532299074e-09 *** df.mm.trans3:probe4 0.282685796439534 0.0498718517668991 5.66824343641393 2.118453913744e-08 *** df.mm.trans3:probe5 -0.145108536889028 0.0498718517668991 -2.90962801155379 0.00373471501479443 ** df.mm.trans3:probe6 0.569590348086661 0.0498718517668991 11.4210787830563 8.4873757949588e-28 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.24122463676749 0.140554897217355 30.174862069792 2.62125267931633e-128 *** df.mm.trans1 -0.0658056909409312 0.122532918598039 -0.537044997326818 0.591409160601878 df.mm.trans2 -0.109475294424451 0.110673036742037 -0.989177650195159 0.322921971546469 df.mm.exp2 -0.0454086560242815 0.146276861353205 -0.310429521143719 0.756327819769424 df.mm.exp3 0.112977622900876 0.146276861353205 0.772354710483412 0.44016806660817 df.mm.exp4 0.0496792223787664 0.146276861353205 0.339624612663854 0.734242290863694 df.mm.exp5 -0.00791004067607482 0.146276861353205 -0.0540758162493998 0.956890367317612 df.mm.exp6 0.215218257200536 0.146276861353205 1.47130759581219 0.141662533607904 df.mm.exp7 -0.137744075577610 0.146276861353205 -0.94166687952792 0.346691826286162 df.mm.exp8 -0.099253870726888 0.146276861353205 -0.678534320525422 0.497659814692799 df.mm.trans1:exp2 0.0157721766089935 0.135938067980765 0.116024722458357 0.90766660960774 df.mm.trans2:exp2 0.189956103359786 0.110260332868050 1.72279638940606 0.085372113775424 . df.mm.trans1:exp3 -0.128740176067571 0.135938067980765 -0.947050211761049 0.34394377675478 df.mm.trans2:exp3 0.0428955199185854 0.110260332868050 0.389038549066592 0.697367309754919 df.mm.trans1:exp4 -0.0183183508287206 0.135938067980765 -0.134755121216763 0.892844674470924 df.mm.trans2:exp4 0.0487838710955953 0.110260332868049 0.442442624891908 0.658307192581431 df.mm.trans1:exp5 0.0547338400218521 0.135938067980765 0.402638060367291 0.68733885610049 df.mm.trans2:exp5 0.0690962633522401 0.110260332868049 0.626664744744865 0.531085691321947 df.mm.trans1:exp6 -0.142649724388657 0.135938067980765 -1.0493728983175 0.294372868991602 df.mm.trans2:exp6 -0.049543069152914 0.110260332868050 -0.449328129747287 0.653335660737786 df.mm.trans1:exp7 0.0728221577890894 0.135938067980765 0.535700991420546 0.592337345825689 df.mm.trans2:exp7 0.0984123589484291 0.110260332868050 0.89254545482101 0.372410905428229 df.mm.trans1:exp8 0.136017704505294 0.135938067980765 1.00058582945684 0.317376830734246 df.mm.trans2:exp8 0.081681656820728 0.110260332868049 0.74080727579952 0.459061595527362 df.mm.trans1:probe2 -0.096213402422616 0.0832447257931616 -1.15578976933239 0.248166048987032 df.mm.trans1:probe3 0.0670164018349259 0.0832447257931615 0.805052827027646 0.421065709484765 df.mm.trans1:probe4 0.0395255665892111 0.0832447257931615 0.474811661791288 0.635071029678062 df.mm.trans1:probe5 0.0493954527135639 0.0832447257931615 0.593376364002892 0.553123190308623 df.mm.trans1:probe6 0.106559691054589 0.0832447257931616 1.28007738675671 0.200946864078245 df.mm.trans1:probe7 0.041383526030141 0.0832447257931615 0.497130906923362 0.619254646248244 df.mm.trans1:probe8 0.0864115178632898 0.0832447257931615 1.03804195448967 0.299613093953488 df.mm.trans1:probe9 0.0562719956515785 0.0832447257931615 0.675982713804568 0.499277466497601 df.mm.trans1:probe10 -0.0294400547206515 0.0832447257931615 -0.353656696447068 0.723703897600286 df.mm.trans1:probe11 0.0883783788420171 0.0832447257931615 1.06166940908198 0.288756166167974 df.mm.trans1:probe12 -0.113772963477512 0.0832447257931616 -1.36672879144565 0.172154194791926 df.mm.trans1:probe13 0.080906476143811 0.0832447257931615 0.97191113758774 0.331434352223974 df.mm.trans1:probe14 0.0440913841363043 0.0832447257931615 0.529659791851057 0.596517711750368 df.mm.trans1:probe15 0.0385264214899558 0.0832447257931615 0.462809158452664 0.643646664324711 df.mm.trans1:probe16 0.0457390736308041 0.0832447257931616 0.549453111833801 0.582871799048814 df.mm.trans1:probe17 0.0282325859258287 0.0832447257931616 0.339151647829057 0.734598385963887 df.mm.trans1:probe18 0.0790301411797805 0.0832447257931615 0.949371151466664 0.342763309510703 df.mm.trans1:probe19 0.102260179924293 0.0832447257931616 1.22842833524828 0.219703834286182 df.mm.trans2:probe2 0.157641728833845 0.0832447257931615 1.89371431441240 0.0586797796941736 . df.mm.trans2:probe3 -0.0646520023055451 0.0832447257931615 -0.776649832040845 0.437630776234986 df.mm.trans2:probe4 -0.0255588211233299 0.0832447257931616 -0.307032318021396 0.758911142497748 df.mm.trans2:probe5 -0.029453060478566 0.0832447257931615 -0.353812931665462 0.723586852287224 df.mm.trans2:probe6 -0.0160629267359467 0.0832447257931616 -0.192960293675041 0.847046682442021 df.mm.trans3:probe2 0.168518321038014 0.0832447257931615 2.02437234830627 0.0433154890936798 * df.mm.trans3:probe3 0.165322223347923 0.0832447257931615 1.9859783520544 0.0474298761617703 * df.mm.trans3:probe4 0.109963298352207 0.0832447257931615 1.32096414883308 0.186949960587071 df.mm.trans3:probe5 0.055388922329091 0.0832447257931615 0.66537455437977 0.506032659286761 df.mm.trans3:probe6 0.0508911988081583 0.0832447257931615 0.611344422403503 0.541172358423607