fitVsDatCorrelation=0.869210358345918 cont.fitVsDatCorrelation=0.259443449917273 fstatistic=15284.0011268510,69,1083 cont.fstatistic=3994.60980272555,69,1083 residuals=-0.383280788436878,-0.0875382682880013,-0.00187441722738051,0.0801193320009962,0.868858076304253 cont.residuals=-0.573235232858646,-0.166952903965439,-0.0386945052297062,0.109830758010961,1.55909826515989 predictedValues: Include Exclude Both Lung 50.6754836488762 54.0981778697456 69.2519888110048 cerebhem 57.6455725074535 47.4226130721755 68.6528402560681 cortex 49.6410784030034 57.8765583804613 72.4524954391221 heart 51.6859654208782 60.1369339335169 70.2431058290538 kidney 51.4163234329188 54.6747519287481 67.8273739414054 liver 56.6284484731569 57.7673738956081 63.6397417846413 stomach 52.594868730147 50.7261790570893 67.230818271119 testicle 54.6682070560152 51.3511600510026 71.4155239618635 diffExp=-3.42269422086941,10.222959435278,-8.23547997745788,-8.45096851263872,-3.25842849582929,-1.13892542245118,1.86868967305769,3.3170470050126 diffExpScore=3.95286009856815 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,0 diffExp1.3Score=0 diffExp1.2=0,1,0,0,0,0,0,0 diffExp1.2Score=0.5 cont.predictedValues: Include Exclude Both Lung 62.0274195541982 56.6036772732333 61.6985667046998 cerebhem 62.1373619955032 59.3534299983051 62.1994328426731 cortex 62.6962578940344 66.0066847906592 61.7583648275042 heart 57.3646094311586 62.0744158351672 60.5351394360195 kidney 61.883928295897 55.6997914762398 58.9088308626038 liver 60.1659054585488 53.6566655816966 59.8527802595199 stomach 61.9909936366175 50.9084465731392 59.822180126135 testicle 60.4786838379767 51.067886800861 60.0831830852785 cont.diffExp=5.42374228096494,2.78393199719807,-3.31042689662483,-4.70980640400863,6.18413681965723,6.50923987685221,11.0825470634783,9.41079703711564 cont.diffExpScore=1.43755151616137 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,1,0 cont.diffExp1.2Score=0.5 tran.correlation=-0.492716472128359 cont.tran.correlation=-0.033233296571556 tran.covariance=-0.00217732742396768 cont.tran.covariance=-0.000130838525116258 tran.mean=53.6881059912998 cont.tran.mean=59.0072599020772 weightedLogRatios: wLogRatio Lung -0.258695957623657 cerebhem 0.772405496210286 cortex -0.611145445360517 heart -0.608917490956947 kidney -0.243983646955979 liver -0.0805759730217507 stomach 0.142699036917271 testicle 0.248500370235343 cont.weightedLogRatios: wLogRatio Lung 0.373497563774864 cerebhem 0.188228582171667 cortex -0.214257018852456 heart -0.322638728035329 kidney 0.428781980613382 liver 0.462564027194566 stomach 0.793456161746985 testicle 0.67953808530704 varWeightedLogRatios=0.214970697694019 cont.varWeightedLogRatios=0.157225621814803 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.74142176682318 0.0608720062610336 61.4637498685204 0 *** df.mm.trans1 0.166716756197955 0.0519148715610274 3.21134871733188 0.00136002055297475 ** df.mm.trans2 0.230808644855729 0.0452203471095592 5.10408830557025 3.92379204862767e-07 *** df.mm.exp2 0.0058592468815781 0.0566940205193229 0.103348586463031 0.917705449373985 df.mm.exp3 0.00170913452225427 0.0566940205193229 0.0301466452122892 0.975955654525146 df.mm.exp4 0.111357434180191 0.0566940205193229 1.96418305070174 0.0497643094887291 * df.mm.exp5 0.045900992023284 0.0566940205193229 0.809626687308931 0.418332609480868 df.mm.exp6 0.261206609966681 0.0566940205193229 4.60730439601923 4.5636479879594e-06 *** df.mm.exp7 0.00243806726257569 0.0566940205193229 0.0430039577409179 0.965706305985804 df.mm.exp8 -0.00703630133484893 0.0566940205193229 -0.124110113736788 0.901251120891014 df.mm.trans1:exp2 0.123011960936200 0.0515444872479577 2.38652021785460 0.0171795856997259 * df.mm.trans2:exp2 -0.137560567412745 0.0342124739485486 -4.02077229549722 6.2026976702437e-05 *** df.mm.trans1:exp3 -0.0223326863697883 0.0515444872479577 -0.433270123773968 0.664904818771489 df.mm.trans2:exp3 0.0658027996776828 0.0342124739485486 1.92335695385964 0.0546971597215692 . df.mm.trans1:exp4 -0.0916133878210832 0.0515444872479577 -1.77736539274068 0.0757887291582854 . df.mm.trans2:exp4 -0.00553374457332763 0.0342124739485486 -0.161746402252281 0.871535731546898 df.mm.trans1:exp5 -0.0313875298872462 0.0515444872479577 -0.608940578577388 0.54269153295869 df.mm.trans2:exp5 -0.0352994671720368 0.0342124739485486 -1.03177183927485 0.302409367604223 df.mm.trans1:exp6 -0.150137364253888 0.0515444872479577 -2.91277248586535 0.00365588819090842 ** df.mm.trans2:exp6 -0.195582963637052 0.0342124739485486 -5.71671501836391 1.40340927766082e-08 *** df.mm.trans1:exp7 0.0347382586394510 0.0515444872479577 0.673947118192108 0.500488748097442 df.mm.trans2:exp7 -0.0667964422227184 0.0342124739485486 -1.95240023633404 0.0511480669716187 . df.mm.trans1:exp8 0.082876381523621 0.0515444872479577 1.60786120783275 0.108157048238015 df.mm.trans2:exp8 -0.0450766759885473 0.0342124739485486 -1.31755090427945 0.187932684768712 df.mm.trans1:probe2 -0.0424546329754995 0.0391508485441116 -1.08438602365580 0.278435016180669 df.mm.trans1:probe3 -0.0650742204383515 0.0391508485441116 -1.66214074172701 0.0967739419043428 . df.mm.trans1:probe4 0.483777104294536 0.0391508485441116 12.3567463358926 6.58014663382059e-33 *** df.mm.trans1:probe5 0.0392245295562845 0.0391508485441116 1.00188197740056 0.316624392693233 df.mm.trans1:probe6 0.0413810614625426 0.0391508485441116 1.05696461255286 0.290763445706016 df.mm.trans1:probe7 -0.186634914523872 0.0391508485441116 -4.76707201667899 2.12401227885901e-06 *** df.mm.trans1:probe8 -0.0313302962478254 0.0391508485441116 -0.800245650168355 0.423743986293379 df.mm.trans1:probe9 0.00936768455303906 0.0391508485441116 0.23927155863517 0.810940290586523 df.mm.trans1:probe10 0.0292567768808928 0.0391508485441116 0.747283340434601 0.455054758455693 df.mm.trans1:probe11 0.236640693227316 0.0391508485441116 6.0443311454844 2.06147674889071e-09 *** df.mm.trans1:probe12 0.161021788502969 0.0391508485441116 4.11285564657799 4.20375635686672e-05 *** df.mm.trans1:probe13 0.0604597462605918 0.0391508485441116 1.54427677838122 0.122813433908074 df.mm.trans1:probe14 0.0468126358177087 0.0391508485441116 1.19569913701780 0.23207572397611 df.mm.trans1:probe15 -0.0154823687752918 0.0391508485441116 -0.39545423282072 0.692585573231413 df.mm.trans1:probe16 0.123091506710924 0.0391508485441116 3.14403164396899 0.00171170402555579 ** df.mm.trans1:probe17 -0.132182311746498 0.0391508485441116 -3.37623108213266 0.000760952393216242 *** df.mm.trans1:probe18 -0.0730966893580151 0.0391508485441116 -1.86705249250617 0.0621642715764826 . df.mm.trans1:probe19 0.124031443150693 0.0391508485441116 3.16803971722211 0.0015776504139667 ** df.mm.trans1:probe20 -0.0420174612770102 0.0391508485441116 -1.07321968334016 0.283411632535804 df.mm.trans1:probe21 0.0845756991499083 0.0391508485441116 2.16025200717211 0.0309719913502637 * df.mm.trans1:probe22 -0.124611811293376 0.0391508485441116 -3.18286361413023 0.00149978347350890 ** df.mm.trans2:probe2 0.126648807323631 0.0391508485441116 3.23489303637787 0.00125368943669222 ** df.mm.trans2:probe3 0.116065134137998 0.0391508485441116 2.96456241573478 0.00309750752510447 ** df.mm.trans2:probe4 0.0463352262045178 0.0391508485441116 1.18350503060774 0.236868767283809 df.mm.trans2:probe5 0.130798246671996 0.0391508485441116 3.34087897289441 0.000863636674172362 *** df.mm.trans2:probe6 0.0629749991191034 0.0391508485441116 1.60852194680146 0.108012365170524 df.mm.trans3:probe2 0.0820213703692871 0.0391508485441116 2.09500875254014 0.0364020435838785 * df.mm.trans3:probe3 0.115264385192579 0.0391508485441116 2.94410950155294 0.00330799347948342 ** df.mm.trans3:probe4 0.653326099578889 0.0391508485441116 16.6874058640844 8.1962955774498e-56 *** df.mm.trans3:probe5 -0.0684868395942028 0.0391508485441116 -1.74930664700761 0.0805212798552235 . df.mm.trans3:probe6 -0.150967913105407 0.0391508485441116 -3.8560572431862 0.000122019308866721 *** df.mm.trans3:probe7 0.0666971489207841 0.0391508485441116 1.70359395520217 0.0887438549816148 . df.mm.trans3:probe8 -0.207434770886944 0.0391508485441116 -5.29834674344862 1.41512901915278e-07 *** df.mm.trans3:probe9 -0.0502514338841472 0.0391508485441116 -1.28353371006834 0.199579719459560 df.mm.trans3:probe10 0.148663582076521 0.0391508485441116 3.79719948876766 0.000154465267170263 *** df.mm.trans3:probe11 0.0785884757029134 0.0391508485441116 2.00732496549512 0.0449631660113313 * df.mm.trans3:probe12 0.0743155314318934 0.0391508485441116 1.89818443776925 0.0579374582412239 . df.mm.trans3:probe13 0.127624521189333 0.0391508485441116 3.25981494489288 0.00114955016202493 ** df.mm.trans3:probe14 0.606942601881405 0.0391508485441116 15.5026678718740 4.17530402602139e-49 *** df.mm.trans3:probe15 -0.0541315992842436 0.0391508485441116 -1.38264178931532 0.167059757764454 df.mm.trans3:probe16 0.0109840218440167 0.0391508485441116 0.280556418378543 0.779104230588351 df.mm.trans3:probe17 -0.231717282973277 0.0391508485441116 -5.91857626565103 4.35305602519446e-09 *** df.mm.trans3:probe18 -0.0672996123835955 0.0391508485441116 -1.71898221587122 0.0859033716605963 . df.mm.trans3:probe19 0.745874810877773 0.0391508485441116 19.0513063857962 5.14555286610125e-70 *** df.mm.trans3:probe20 0.0960808244601637 0.0391508485441116 2.45411857042916 0.0142796119585886 * cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.17164324202465 0.118896836956963 35.0862423996584 9.23130272546429e-181 *** df.mm.trans1 -0.0253318055210698 0.101401520974419 -0.249816820079657 0.80277638776778 df.mm.trans2 -0.148056818988590 0.0883255960772275 -1.67626175835979 0.093975550595471 . df.mm.exp2 0.0411216909845077 0.110736283033202 0.371347943583932 0.71045102620952 df.mm.exp3 0.163438565450227 0.110736283033202 1.47592605579170 0.140254420363463 df.mm.exp4 0.0331476697356353 0.110736283033202 0.299338833015524 0.764738962095817 df.mm.exp5 0.0278561100540675 0.110736283033202 0.251553594639939 0.801433855283896 df.mm.exp6 -0.0535661341962356 0.110736283033202 -0.483727038049265 0.628677391307913 df.mm.exp7 -0.075748322661983 0.110736283033202 -0.684042488939887 0.494094673139129 df.mm.exp8 -0.101672945990048 0.110736283033202 -0.91815386253812 0.358742748591984 df.mm.trans1:exp2 -0.0393507786748242 0.100678076389832 -0.390857474495793 0.695979463381146 df.mm.trans2:exp2 0.00631426853705529 0.066824722673201 0.0944900073575245 0.924737398581599 df.mm.trans1:exp3 -0.152713340458373 0.100678076389832 -1.51684801631546 0.129596885492805 df.mm.trans2:exp3 -0.00975649643625885 0.066824722673201 -0.146001300805571 0.883947531492032 df.mm.trans1:exp4 -0.111296655149601 0.100678076389832 -1.10547061625069 0.269201236821478 df.mm.trans2:exp4 0.0591122983942435 0.066824722673201 0.884587260965163 0.376575621509953 df.mm.trans1:exp5 -0.0301721420387312 0.100678076389832 -0.299689298014621 0.764471669279134 df.mm.trans2:exp5 -0.043953659412381 0.0668247226732009 -0.657745481823121 0.510841465581719 df.mm.trans1:exp6 0.0230954334073983 0.100678076389832 0.229398834737081 0.818602256605647 df.mm.trans2:exp6 9.78849351979758e-05 0.066824722673201 0.00146480121850519 0.998831527908175 df.mm.trans1:exp7 0.0751608950745634 0.100678076389832 0.746546793201884 0.455499202617599 df.mm.trans2:exp7 -0.0302967756768049 0.0668247226732009 -0.453376751370418 0.650368298604666 df.mm.trans1:exp8 0.0763873775311532 0.100678076389832 0.758729013011496 0.448179766351926 df.mm.trans2:exp8 -0.00124514528021544 0.0668247226732009 -0.0186330033317862 0.98513730664831 df.mm.trans1:probe2 0.113976404038497 0.0764704885216796 1.49046261168038 0.136393817917184 df.mm.trans1:probe3 0.000481371561991207 0.0764704885216796 0.00629486709575207 0.994978615203147 df.mm.trans1:probe4 -0.0285206280825427 0.0764704885216796 -0.372962545864435 0.709249302320611 df.mm.trans1:probe5 -0.0696903040279592 0.0764704885216796 -0.911335933315004 0.362321197891013 df.mm.trans1:probe6 -0.0703800147695486 0.0764704885216796 -0.920355239388796 0.3575921053955 df.mm.trans1:probe7 -0.0763730948367541 0.0764704885216796 -0.99872638861333 0.318150343825091 df.mm.trans1:probe8 -0.00660579151890364 0.0764704885216796 -0.0863835401944749 0.931177498670738 df.mm.trans1:probe9 -0.141545691688243 0.0764704885216796 -1.85098453566325 0.0644439045862146 . df.mm.trans1:probe10 -0.131465604386309 0.0764704885216796 -1.71916783752517 0.0858695626060496 . df.mm.trans1:probe11 -0.0840501948091731 0.0764704885216796 -1.09911936531365 0.271960276662335 df.mm.trans1:probe12 0.0541974963880698 0.0764704885216796 0.70873741538482 0.478639967902277 df.mm.trans1:probe13 0.00306891038237894 0.0764704885216796 0.040131957330296 0.967995320800286 df.mm.trans1:probe14 -0.0899747328662487 0.0764704885216796 -1.17659419477542 0.239616058442411 df.mm.trans1:probe15 -0.0784629118503484 0.0764704885216796 -1.02605480057976 0.305094869307752 df.mm.trans1:probe16 -0.023255072294608 0.0764704885216796 -0.304105188082002 0.76110617328282 df.mm.trans1:probe17 -0.0322067913897669 0.0764704885216796 -0.421166282737114 0.673717232645792 df.mm.trans1:probe18 -0.010965602582918 0.0764704885216796 -0.143396528450439 0.886003700117678 df.mm.trans1:probe19 -0.0713046569916542 0.0764704885216796 -0.932446730367613 0.35131352810463 df.mm.trans1:probe20 -0.0306374999549604 0.0764704885216796 -0.400644752599882 0.68876071403672 df.mm.trans1:probe21 -0.0111152490446847 0.0764704885216796 -0.145353446271413 0.884458865664523 df.mm.trans1:probe22 -0.00203607190999133 0.0764704885216796 -0.0266255904644064 0.978763267428404 df.mm.trans2:probe2 0.0568821615419755 0.0764704885216796 0.743844620867687 0.457131829361784 df.mm.trans2:probe3 0.0910767446731878 0.0764704885216796 1.19100513719573 0.233912531998717 df.mm.trans2:probe4 0.108130105429758 0.0764704885216796 1.41401091480019 0.157646091881381 df.mm.trans2:probe5 0.0859440669076019 0.0764704885216796 1.12388541735596 0.261310691393151 df.mm.trans2:probe6 -0.0173573101380308 0.0764704885216796 -0.226980505467935 0.820481737872264 df.mm.trans3:probe2 0.132105284893791 0.0764704885216796 1.72753290122292 0.0843570951809007 . df.mm.trans3:probe3 0.135182161392224 0.0764704885216796 1.76776903097590 0.0773810598411317 . df.mm.trans3:probe4 0.171174844141337 0.0764704885216796 2.23844318835243 0.0253947287319650 * df.mm.trans3:probe5 0.0562043513593285 0.0764704885216796 0.734980937690681 0.462510222795616 df.mm.trans3:probe6 0.143768196017314 0.0764704885216796 1.88004809170999 0.0603697633167178 . df.mm.trans3:probe7 0.0796517211859306 0.0764704885216796 1.04160078908544 0.297829264681349 df.mm.trans3:probe8 0.120907707455547 0.0764704885216796 1.58110285147805 0.114146509565877 df.mm.trans3:probe9 0.0317104614222081 0.0764704885216796 0.414675805467335 0.678461371056795 df.mm.trans3:probe10 0.176615575513395 0.0764704885216796 2.30959130676043 0.0210981896039897 * df.mm.trans3:probe11 0.0814396030028068 0.0764704885216796 1.06498081256168 0.287121988372208 df.mm.trans3:probe12 0.0953397517963977 0.0764704885216796 1.24675222611359 0.212757937839785 df.mm.trans3:probe13 0.156100170724081 0.0764704885216796 2.04131258661734 0.0414617491765442 * df.mm.trans3:probe14 0.172966306279392 0.0764704885216796 2.26187003147437 0.0239030269721732 * df.mm.trans3:probe15 0.0629038423749097 0.0764704885216796 0.822589780593285 0.410922387068687 df.mm.trans3:probe16 0.119456798912866 0.0764704885216796 1.56212940733339 0.118549652844892 df.mm.trans3:probe17 0.146181634453824 0.0764704885216796 1.91160848164820 0.0561901265748464 . df.mm.trans3:probe18 0.284971503079695 0.0764704885216796 3.72655528411989 0.000204142133911704 *** df.mm.trans3:probe19 0.160746116319456 0.0764704885216796 2.10206733900862 0.0357778317862507 * df.mm.trans3:probe20 0.152695630812180 0.0764704885216796 1.99679162202410 0.0460977558210766 *