fitVsDatCorrelation=0.704018798952865 cont.fitVsDatCorrelation=0.238924297192011 fstatistic=15964.8842294096,70,1106 cont.fstatistic=8532.13581260437,70,1106 residuals=-0.487440900174573,-0.0781168004859613,-0.00323067650062012,0.0731046195744653,0.643618966126833 cont.residuals=-0.413419200329448,-0.119518411342063,-0.0169761078279193,0.0884726028110709,0.763681240588342 predictedValues: Include Exclude Both Lung 50.6343849999068 48.9088250702292 52.1827566791681 cerebhem 54.3127429146199 58.5265688159435 48.8818953237885 cortex 48.4184620951114 43.4143887951555 49.484404286858 heart 50.6745434322444 42.0960484532736 51.5868508898044 kidney 49.0370844146869 47.2503385261551 51.5239968206492 liver 51.4390439830977 44.1100106592733 54.7167544604453 stomach 51.7126750206432 44.264770137193 54.093132928978 testicle 49.727020395789 48.9535248558115 52.3343833467177 diffExp=1.72555992967762,-4.21382590132368,5.00407329995591,8.57849497897078,1.78674588853176,7.32903332382437,7.4479048834502,0.773495539977496 diffExpScore=1.25237097530516 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,0 diffExp1.3Score=0 diffExp1.2=0,0,0,1,0,0,0,0 diffExp1.2Score=0.5 cont.predictedValues: Include Exclude Both Lung 53.1224346368545 52.5129845597633 52.4476876648652 cerebhem 51.9400432293032 51.6411491758694 49.453046224733 cortex 52.0022897268807 51.3347817110984 51.0647281072784 heart 52.5071052382894 47.8340834860326 53.7078628206886 kidney 51.8993787437885 55.367860933243 52.2799882074078 liver 54.3504450028805 51.580943425993 51.4888637000273 stomach 52.2907112556928 53.0289507972692 54.5180523040768 testicle 52.1781585752569 50.3131319217552 52.4168801786926 cont.diffExp=0.609450077091189,0.298894053433735,0.667508015782346,4.67302175225672,-3.46848218945446,2.76950157688756,-0.73823954157644,1.86502665350173 cont.diffExpScore=1.9657095356045 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.631416394547876 cont.tran.correlation=-0.123418981532660 tran.covariance=0.00224101243979306 cont.tran.covariance=-7.80181106639312e-05 tran.mean=48.9675270355709 cont.tran.mean=52.1190282762482 weightedLogRatios: wLogRatio Lung 0.135477770040828 cerebhem -0.301287830914676 cortex 0.417306920438525 heart 0.710848049110345 kidney 0.143792008631698 liver 0.593867914839591 stomach 0.601519029068521 testicle 0.0611203857109323 cont.weightedLogRatios: wLogRatio Lung 0.0457727461334361 cerebhem 0.0227801819754382 cortex 0.0509641117602904 heart 0.364856225392034 kidney -0.257583002951956 liver 0.207596549226681 stomach -0.0555699233090912 testicle 0.14327895973412 varWeightedLogRatios=0.118533386316314 cont.varWeightedLogRatios=0.0339029549866646 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.95061149146156 0.058295512545397 67.7687066973649 0 *** df.mm.trans1 -0.108717271175166 0.0506079819276127 -2.1482237985832 0.0319126447323431 * df.mm.trans2 -0.0708048066116137 0.0438016086785886 -1.61648872604592 0.106273862640878 df.mm.exp2 0.314995970891383 0.055537529449699 5.67176779400458 1.80321057285056e-08 *** df.mm.exp3 -0.110822075006118 0.055537529449699 -1.99544481189951 0.0462393479134796 * df.mm.exp4 -0.137725888847992 0.055537529449699 -2.47987064265672 0.0132910365823068 * df.mm.exp5 -0.0538476361270653 0.055537529449699 -0.96957204723764 0.332471830660572 df.mm.exp6 -0.134922343797306 0.055537529449699 -2.42939045244183 0.0152826540718914 * df.mm.exp7 -0.114651858869902 0.055537529449699 -2.06440329640057 0.0392122343409015 * df.mm.exp8 -0.0200703838710918 0.055537529449699 -0.361384167966452 0.717881303788729 df.mm.trans1:exp2 -0.24486798629928 0.052267698984216 -4.68488169669046 3.14930760107279e-06 *** df.mm.trans2:exp2 -0.135473003944224 0.0355407128887388 -3.81176945910808 0.000145585509201751 *** df.mm.trans1:exp3 0.0660723732822603 0.052267698984216 1.26411482744272 0.206455160859573 df.mm.trans2:exp3 -0.00834485175715104 0.0355407128887388 -0.234796971666686 0.81440977941817 df.mm.trans1:exp4 0.138518680461966 0.052267698984216 2.65017751219155 0.00815975722579945 ** df.mm.trans2:exp4 -0.0122780878178436 0.0355407128887389 -0.345465434423909 0.729810185637355 df.mm.trans1:exp5 0.0217935818200960 0.052267698984216 0.416960804543497 0.676787991626168 df.mm.trans2:exp5 0.0193496026342817 0.0355407128887389 0.544434848418944 0.586252015675408 df.mm.trans1:exp6 0.150688947506779 0.052267698984216 2.88302241030898 0.00401503913262164 ** df.mm.trans2:exp6 0.0316512475846248 0.0355407128887389 0.890563103889048 0.373357280441377 df.mm.trans1:exp7 0.13572388418599 0.052267698984216 2.59670670076707 0.00953709075267641 ** df.mm.trans2:exp7 0.0148831110584413 0.0355407128887389 0.418762310847091 0.675471158817937 df.mm.trans1:exp8 0.00198794821445193 0.052267698984216 0.0380339722828101 0.96966745939503 df.mm.trans2:exp8 0.0209839075852619 0.0355407128887389 0.590418871195764 0.555030477607961 df.mm.trans1:probe2 0.300294001241578 0.0369588443887563 8.12509173941959 1.18679595587346e-15 *** df.mm.trans1:probe3 -0.0520403319252181 0.0369588443887564 -1.40806166388281 0.159393826314686 df.mm.trans1:probe4 -0.0158773637409504 0.0369588443887563 -0.429595784271346 0.667573381415916 df.mm.trans1:probe5 0.187870002827504 0.0369588443887564 5.08322178181139 4.35465962618019e-07 *** df.mm.trans1:probe6 0.0434956707361727 0.0369588443887563 1.17686771476559 0.239501522948165 df.mm.trans1:probe7 0.43153935379842 0.0369588443887564 11.6762133918263 8.69824629975761e-30 *** df.mm.trans1:probe8 -0.0317310474936304 0.0369588443887564 -0.8585508561865 0.390774385322137 df.mm.trans1:probe9 0.232635450073212 0.0369588443887564 6.29444599582731 4.43946434104067e-10 *** df.mm.trans1:probe10 0.180246130441453 0.0369588443887564 4.87694172862958 1.23505891626732e-06 *** df.mm.trans1:probe11 0.060740470586011 0.0369588443887564 1.64346238608287 0.100571521582348 df.mm.trans1:probe12 0.183791411260661 0.0369588443887564 4.97286682796212 7.64236900074522e-07 *** df.mm.trans1:probe13 0.084610210750233 0.0369588443887564 2.28930888261141 0.0222491595335247 * df.mm.trans1:probe14 0.0662724862112947 0.0369588443887564 1.79314281350897 0.0732232403521934 . df.mm.trans1:probe15 0.0522517925942537 0.0369588443887564 1.41378318122278 0.157706976946121 df.mm.trans1:probe16 0.101509541387699 0.0369588443887564 2.7465561509434 0.00612020551012192 ** df.mm.trans1:probe17 -0.0299272316586246 0.0369588443887563 -0.809744789199337 0.418261045767198 df.mm.trans1:probe18 0.142229465627356 0.0369588443887564 3.84832015122813 0.000125735861028618 *** df.mm.trans1:probe19 0.156498235980006 0.0369588443887564 4.23439202627277 2.48202944380497e-05 *** df.mm.trans1:probe20 0.0830361637341547 0.0369588443887564 2.24671969882846 0.0248545749070529 * df.mm.trans1:probe21 0.243589650926211 0.0369588443887564 6.59083515609908 6.75534566278517e-11 *** df.mm.trans1:probe22 0.0450525593087964 0.0369588443887563 1.21899264043284 0.223106907884425 df.mm.trans1:probe23 -0.0130682492375691 0.0369588443887564 -0.353589227523163 0.723714136756021 df.mm.trans1:probe24 -0.0209641158626978 0.0369588443887563 -0.567228662297556 0.570673943684479 df.mm.trans1:probe25 0.156257252265912 0.0369588443887563 4.22787170027018 2.55385695847597e-05 *** df.mm.trans1:probe26 0.0656649423633373 0.0369588443887563 1.77670442486329 0.0758917019127951 . df.mm.trans1:probe27 0.0255224054105454 0.0369588443887564 0.690562863440337 0.489985184539544 df.mm.trans1:probe28 0.459102324339883 0.0369588443887564 12.4219880770826 2.92847321471441e-33 *** df.mm.trans1:probe29 -0.00156159546813527 0.0369588443887564 -0.0422522807182342 0.966305212038045 df.mm.trans1:probe30 0.184995812312371 0.0369588443887564 5.00545445540638 6.48022521935568e-07 *** df.mm.trans1:probe31 0.235641440160209 0.0369588443887564 6.37577943946472 2.66846264686218e-10 *** df.mm.trans2:probe2 0.0963267661524884 0.0369588443887564 2.60632516372165 0.00927498106707088 ** df.mm.trans2:probe3 0.0628013252501259 0.0369588443887564 1.69922318429500 0.0895583508641442 . df.mm.trans2:probe4 -0.033459405111535 0.0369588443887564 -0.905315240909266 0.365495571977144 df.mm.trans2:probe5 0.0201647404504912 0.0369588443887564 0.545599863415258 0.585451036043338 df.mm.trans2:probe6 0.0368875816278517 0.0369588443887564 0.998071834710114 0.318462835059768 df.mm.trans3:probe2 0.100241579532580 0.0369588443887564 2.71224875102088 0.00678649552567519 ** df.mm.trans3:probe3 0.208750695694732 0.0369588443887564 5.64819325785625 2.06074077061271e-08 *** df.mm.trans3:probe4 0.090422903480599 0.0369588443887564 2.44658362500391 0.0145765959470884 * df.mm.trans3:probe5 0.165217165544795 0.0369588443887564 4.47030117627427 8.61508667360382e-06 *** df.mm.trans3:probe6 0.316027657957886 0.0369588443887564 8.55079922504364 4.01591966882804e-17 *** df.mm.trans3:probe7 0.236674209771197 0.0369588443887564 6.40372321389999 2.23732205141589e-10 *** df.mm.trans3:probe8 0.233580793257168 0.0369588443887564 6.32002426266955 3.78510700766355e-10 *** df.mm.trans3:probe9 0.265825960615144 0.0369588443887564 7.19248572328235 1.17017385447320e-12 *** df.mm.trans3:probe10 0.209435950752572 0.0369588443887564 5.66673428826921 1.85542493911593e-08 *** df.mm.trans3:probe11 0.204597326208850 0.0369588443887564 5.53581502865098 3.86759362489356e-08 *** df.mm.trans3:probe12 0.173178095090916 0.0369588443887564 4.6857010265072 3.13697894266674e-06 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.03868688621509 0.0797080498892747 50.6684944848779 1.50737746083681e-290 *** df.mm.trans1 -0.0226027854670344 0.0691968107346229 -0.326644902085422 0.743998280478262 df.mm.trans2 -0.068961122170143 0.0598903870527699 -1.15145561021973 0.249793700784884 df.mm.exp2 0.01954164611709 0.0759370314251266 0.257340137615966 0.79696407856423 df.mm.exp3 -0.0172812807031966 0.0759370314251266 -0.227573825034705 0.820019631587358 df.mm.exp4 -0.128716038133388 0.0759370314251266 -1.6950364758504 0.09034998616696 . df.mm.exp5 0.0328489010599504 0.0759370314251266 0.432580790208255 0.665403680600954 df.mm.exp6 0.0233959931805951 0.0759370314251266 0.308097284572723 0.758066321210357 df.mm.exp7 -0.0447186790932519 0.0759370314251266 -0.58889158891264 0.556054251741447 df.mm.exp8 -0.0601421294524034 0.0759370314251266 -0.792000007423297 0.428530503119898 df.mm.trans1:exp2 -0.0420509444797422 0.0714661588228963 -0.58840359090728 0.556381562953599 df.mm.trans2:exp2 -0.036283290752602 0.0485951798404708 -0.746643820883337 0.455437271249062 df.mm.trans1:exp3 -0.00403030536556354 0.0714661588228963 -0.0563945989534884 0.955037645472607 df.mm.trans2:exp3 -0.00541065476373273 0.0485951798404708 -0.111341387798027 0.91136583853944 df.mm.trans1:exp4 0.117065199555802 0.0714661588228963 1.63805081291561 0.101695532393188 df.mm.trans2:exp4 0.0353940032111345 0.0485951798404708 0.728343908332608 0.46655726759586 df.mm.trans1:exp5 -0.0561414181043074 0.0714661588228963 -0.785566469906884 0.432289767436292 df.mm.trans2:exp5 0.0200899328297189 0.0485951798404708 0.413414106001264 0.67938338433309 df.mm.trans1:exp6 -0.000542528811402428 0.0714661588228964 -0.00759140858188411 0.993944359495763 df.mm.trans2:exp6 -0.0413041663215109 0.0485951798404708 -0.849964265120636 0.395528907126796 df.mm.trans1:exp7 0.0289380924468091 0.0714661588228963 0.404920215713874 0.685614460088337 df.mm.trans2:exp7 0.0544962210020485 0.0485951798404708 1.12143264375088 0.262347167410925 df.mm.trans1:exp8 0.0422067817911913 0.0714661588228963 0.590584165797772 0.55491973199459 df.mm.trans2:exp8 0.0173477805221399 0.0485951798404708 0.356985622423656 0.721170668270551 df.mm.trans1:probe2 -0.0675245624505871 0.0505342055290248 -1.33621498040181 0.181753861750236 df.mm.trans1:probe3 -0.0878093932082762 0.0505342055290248 -1.73762290886006 0.0825556342349965 . df.mm.trans1:probe4 -0.111354139379380 0.0505342055290248 -2.2035399233777 0.0277622390062249 * df.mm.trans1:probe5 -0.0893661467944692 0.0505342055290248 -1.76842884653922 0.0772648557044502 . df.mm.trans1:probe6 -0.0952056435887136 0.0505342055290248 -1.88398417650063 0.0598292385462018 . df.mm.trans1:probe7 -0.0981852801309587 0.0505342055290248 -1.94294694263206 0.0522760580554772 . df.mm.trans1:probe8 -0.061690370431078 0.0505342055290248 -1.22076462438191 0.222435340995222 df.mm.trans1:probe9 -0.0884660175201288 0.0505342055290248 -1.75061656939115 0.0802892262106537 . df.mm.trans1:probe10 0.00125812772113861 0.0505342055290248 0.0248965568562465 0.980141964682957 df.mm.trans1:probe11 -0.0582190491270787 0.0505342055290248 -1.15207211665057 0.249540402072145 df.mm.trans1:probe12 -0.0539277081278839 0.0505342055290248 -1.06715258631918 0.286135818838106 df.mm.trans1:probe13 0.0125177178884447 0.0505342055290248 0.247707820028060 0.804406459066684 df.mm.trans1:probe14 -0.106792095389932 0.0505342055290248 -2.11326356617193 0.0348017216741186 * df.mm.trans1:probe15 -0.0472461239835751 0.0505342055290248 -0.934933546277657 0.35002662572817 df.mm.trans1:probe16 -0.0648296025523516 0.0505342055290248 -1.28288555986333 0.199800945305046 df.mm.trans1:probe17 -0.0249736173348216 0.0505342055290248 -0.494192341076339 0.621268483867283 df.mm.trans1:probe18 -0.0446403348001882 0.0505342055290248 -0.883368687265671 0.377229072487178 df.mm.trans1:probe19 -0.00256476400790135 0.0505342055290248 -0.0507530291819519 0.959531484108727 df.mm.trans1:probe20 -0.034392797073735 0.0505342055290248 -0.680584501402345 0.496276883949889 df.mm.trans1:probe21 -0.0775050128190726 0.0505342055290248 -1.53371388760741 0.12538604384597 df.mm.trans1:probe22 -0.0830821178336665 0.0505342055290248 -1.64407685772259 0.100444522016359 df.mm.trans1:probe23 -0.0300343356404035 0.0505342055290248 -0.594336753214671 0.552408452721507 df.mm.trans1:probe24 -0.0630839822045763 0.0505342055290248 -1.24834221779431 0.212169952940160 df.mm.trans1:probe25 -0.105586045756757 0.0505342055290248 -2.08939756055158 0.0369000197560485 * df.mm.trans1:probe26 -0.096958061359816 0.0505342055290248 -1.91866202990224 0.0552842934527075 . df.mm.trans1:probe27 -0.0631822806600379 0.0505342055290248 -1.25028740431565 0.211459042027900 df.mm.trans1:probe28 -0.0697778488908724 0.0505342055290248 -1.38080431185952 0.167618090510045 df.mm.trans1:probe29 -0.0550836208549644 0.0505342055290248 -1.09002645392984 0.275938919432353 df.mm.trans1:probe30 -0.0345138052336394 0.0505342055290248 -0.682979080650948 0.494763095309328 df.mm.trans1:probe31 -0.0676259343510594 0.0505342055290248 -1.33822098602535 0.181099459782872 df.mm.trans2:probe2 -0.00423303965110877 0.0505342055290248 -0.083765829635483 0.933257774978388 df.mm.trans2:probe3 -0.095783965711708 0.0505342055290248 -1.89542834816496 0.0582962076050052 . df.mm.trans2:probe4 -0.0130092624160912 0.0505342055290248 -0.257434786594582 0.79689103875803 df.mm.trans2:probe5 -0.0385343420550025 0.0505342055290248 -0.762539781749809 0.445900503222967 df.mm.trans2:probe6 -0.00441479159292717 0.0505342055290248 -0.0873624418690324 0.93039923636492 df.mm.trans3:probe2 0.00519549658869816 0.0505342055290248 0.102811482525714 0.918131229349531 df.mm.trans3:probe3 0.0185071150502591 0.0505342055290248 0.366229464904309 0.714263899513812 df.mm.trans3:probe4 0.0412793624550058 0.0505342055290248 0.816859828365098 0.414184450176463 df.mm.trans3:probe5 -0.0753770579882701 0.0505342055290248 -1.49160469031173 0.136087965803477 df.mm.trans3:probe6 0.0111753264313394 0.0505342055290248 0.221143803773086 0.825021283265306 df.mm.trans3:probe7 0.054532075824237 0.0505342055290248 1.07911216280853 0.280773006474824 df.mm.trans3:probe8 -0.0279570577804547 0.0505342055290248 -0.553230381041556 0.580217473305547 df.mm.trans3:probe9 0.0628341038310389 0.0505342055290248 1.24339748044420 0.213984895912677 df.mm.trans3:probe10 0.0205007725388737 0.0505342055290248 0.405681108949045 0.685055390938395 df.mm.trans3:probe11 0.0438978314811396 0.0505342055290248 0.868675603417303 0.385213046408964 df.mm.trans3:probe12 -0.00226874251159338 0.0505342055290248 -0.0448951851096246 0.964198958942809