chr19.12108_chr19_45480162_45480816_+_0.R fitVsDatCorrelation=0.777157518097565 cont.fitVsDatCorrelation=0.290107137550355 fstatistic=6557.7987950966,43,485 cont.fstatistic=2829.31863622316,43,485 residuals=-0.510445172218164,-0.0795388017194339,-0.00346005704704991,0.0698245141715122,1.48673628952678 cont.residuals=-0.593197483566876,-0.177879788229990,-0.0299900990332828,0.139990239729606,1.34397586359593 predictedValues: Include Exclude Both chr19.12108_chr19_45480162_45480816_+_0.R.tl.Lung 50.9071383488911 55.1651662213882 66.3662371552585 chr19.12108_chr19_45480162_45480816_+_0.R.tl.cerebhem 51.48849681261 53.1053483206892 66.138089074557 chr19.12108_chr19_45480162_45480816_+_0.R.tl.cortex 62.6915299580296 55.2721970654116 88.6787307239759 chr19.12108_chr19_45480162_45480816_+_0.R.tl.heart 51.9317639183248 58.9241774831078 62.7846603426996 chr19.12108_chr19_45480162_45480816_+_0.R.tl.kidney 52.691078904743 61.4031293281321 68.5944221367179 chr19.12108_chr19_45480162_45480816_+_0.R.tl.liver 52.0659929746545 61.816341844256 60.2394049469541 chr19.12108_chr19_45480162_45480816_+_0.R.tl.stomach 50.5321813648174 54.7481181195177 63.366539769077 chr19.12108_chr19_45480162_45480816_+_0.R.tl.testicle 50.0060645999174 57.2113235742017 66.3201665128139 diffExp=-4.25802787249718,-1.61685150807921,7.41933289261807,-6.99241356478297,-8.71205042338904,-9.75034886960144,-4.2159367547003,-7.20525897428433 diffExpScore=1.38089935200342 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,0 diffExp1.3Score=0 diffExp1.2=0,0,0,0,0,0,0,0 diffExp1.2Score=0 cont.predictedValues: Include Exclude Both Lung 62.2823347574904 50.5334864202309 57.0670272145645 cerebhem 63.2394827348477 57.0993086432523 62.6429966607734 cortex 51.532533287782 55.405695787001 53.8242724514779 heart 56.8833978977059 56.1863777318279 58.8123465352508 kidney 61.3198332591779 56.2486371230622 57.5166126473683 liver 57.8698488953672 55.4673443178363 58.2754823400719 stomach 57.3839220747622 48.7835908211356 55.4861356812526 testicle 65.1722683006165 53.5657933084903 61.8309283643962 cont.diffExp=11.7488483372595,6.14017409159538,-3.87316249921893,0.69702016587798,5.07119613611565,2.40250457753091,8.60033125362659,11.6064749921262 cont.diffExpScore=1.15546896557995 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=1,0,0,0,0,0,0,1 cont.diffExp1.2Score=0.666666666666667 tran.correlation=-0.104658146162324 cont.tran.correlation=-0.0505662328243486 tran.covariance=-0.000362246824930608 cont.tran.covariance=-0.000234605058967652 tran.mean=54.9975030524183 cont.tran.mean=56.8108659600366 weightedLogRatios: wLogRatio Lung -0.318917797191292 cerebhem -0.122341746976845 cortex 0.513303319560155 heart -0.506937135706538 kidney -0.618325040579882 liver -0.693204265849224 stomach -0.317539617155903 testicle -0.535663767770369 cont.weightedLogRatios: wLogRatio Lung 0.841843429858526 cerebhem 0.418338175524471 cortex -0.288314448237350 heart 0.0497462687956135 kidney 0.351582605780801 liver 0.1711768743902 stomach 0.644378813390278 testicle 0.799981788917542 varWeightedLogRatios=0.149001394478365 cont.varWeightedLogRatios=0.151549696076295 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.92709117684793 0.0881818722057972 44.5339963715327 1.74981308387730e-173 *** df.mm.trans1 -0.00766757130382803 0.0705942002197068 -0.108614748519916 0.913552982956266 df.mm.trans2 0.179464197183698 0.0705942002197067 2.54219463674297 0.0113258162017523 * df.mm.exp2 -0.0232551634248196 0.0945304434528392 -0.246007133526476 0.805780785242203 df.mm.exp3 -0.079670118097335 0.0945304434528392 -0.842798522754018 0.399756564822336 df.mm.exp4 0.141324919826089 0.0945304434528391 1.49502017195757 0.135559528515202 df.mm.exp5 0.108549325995149 0.0945304434528392 1.14830018806908 0.251410704991538 df.mm.exp6 0.233206651744514 0.0945304434528392 2.46700050508977 0.0139694792336783 * df.mm.exp7 0.0312710125744805 0.0945304434528392 0.330803616615651 0.740935693276789 df.mm.exp8 0.0192556987539102 0.0945304434528392 0.203698385943961 0.838674642664394 df.mm.trans1:exp2 0.0346104269491409 0.0741557808914779 0.466725945476739 0.640905545205207 df.mm.trans2:exp2 -0.0147988991044308 0.0741557808914779 -0.199565009315834 0.841904436891294 df.mm.trans1:exp3 0.287893311888043 0.0741557808914779 3.88227739533019 0.000117813131808052 *** df.mm.trans2:exp3 0.0816084272772686 0.0741557808914779 1.10049987062637 0.271660286396623 df.mm.trans1:exp4 -0.121397451649597 0.0741557808914779 -1.63705985143969 0.102266611228101 df.mm.trans2:exp4 -0.0754051371849999 0.0741557808914779 -1.01684772621234 0.309732851366742 df.mm.trans1:exp5 -0.0741063218565759 0.0741557808914779 -0.999333038715155 0.318131704585863 df.mm.trans2:exp5 -0.00142023325985097 0.0741557808914779 -0.0191520235209900 0.984727706523459 df.mm.trans1:exp6 -0.210697798452097 0.0741557808914779 -2.84128622096826 0.00468234125715353 ** df.mm.trans2:exp6 -0.119370598475078 0.0741557808914779 -1.60972748233572 0.108108007006708 df.mm.trans1:exp7 -0.0386637808391223 0.0741557808914779 -0.521385930730123 0.602335940967758 df.mm.trans2:exp7 -0.0388597240901483 0.0741557808914779 -0.524028250029717 0.60049827632961 df.mm.trans1:exp8 -0.0371145650169244 0.0741557808914779 -0.500494561189223 0.616953916522866 df.mm.trans2:exp8 0.0171644372480993 0.0741557808914779 0.231464587679527 0.817051513274757 df.mm.trans1:probe2 0.0622591410547577 0.0507709924545913 1.22627386317967 0.220690666469656 df.mm.trans1:probe3 0.095769481920641 0.0507709924545913 1.8863031288249 0.0598512984487774 . df.mm.trans1:probe4 0.0166734218007239 0.0507709924545912 0.328404488362845 0.742747587977949 df.mm.trans1:probe5 -0.0496447539030283 0.0507709924545913 -0.977817283115546 0.328652176239152 df.mm.trans1:probe6 0.0442155217689112 0.0507709924545913 0.870881572946537 0.384249672777349 df.mm.trans2:probe2 -0.276355546144526 0.0507709924545913 -5.44317794046854 8.3249144608989e-08 *** df.mm.trans2:probe3 -0.238514070962403 0.0507709924545913 -4.69784141359314 3.42902524039633e-06 *** df.mm.trans2:probe4 -0.385421592190373 0.0507709924545912 -7.5913740022925 1.63670933940487e-13 *** df.mm.trans2:probe5 -0.357781787093877 0.0507709924545913 -7.04697248953466 6.31153657036917e-12 *** df.mm.trans2:probe6 -0.281505670110295 0.0507709924545913 -5.54461625626225 4.84664498700762e-08 *** df.mm.trans3:probe2 -0.201811694999157 0.0507709924545912 -3.9749409109868 8.11088612960956e-05 *** df.mm.trans3:probe3 0.238775376602424 0.0507709924545913 4.70298816427473 3.34736260071582e-06 *** df.mm.trans3:probe4 0.187139466904618 0.0507709924545912 3.68595250667973 0.000253555843034982 *** df.mm.trans3:probe5 0.0916616879809672 0.0507709924545913 1.80539484358018 0.0716328884613044 . df.mm.trans3:probe6 0.0557599317222872 0.0507709924545912 1.09826357584319 0.272634330007886 df.mm.trans3:probe7 -0.0249311034413306 0.0507709924545912 -0.491050149622909 0.623613095948874 df.mm.trans3:probe8 0.0914422678145645 0.0507709924545912 1.80107308117621 0.0723123984839716 . df.mm.trans3:probe9 0.395178705037728 0.0507709924545913 7.78355288979567 4.29255741107212e-14 *** df.mm.trans3:probe10 0.129791840968912 0.0507709924545913 2.55641725114977 0.0108791685050039 * cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.97940815902774 0.134099344215386 29.6750754622344 4.25861887383747e-111 *** df.mm.trans1 0.14832152182765 0.107353537842555 1.3816174558232 0.167725289581165 df.mm.trans2 -0.076382682861182 0.107353537842555 -0.711505968002706 0.477112820331774 df.mm.exp2 0.0441813964549171 0.143753700826756 0.307340932447799 0.758715807384863 df.mm.exp3 -0.038916358446097 0.143753700826756 -0.270715523998905 0.786725004849368 df.mm.exp4 -0.0147615031003897 0.143753700826756 -0.102686073579277 0.918254569541434 df.mm.exp5 0.0837237697255774 0.143753700826756 0.582411230069663 0.560560368516244 df.mm.exp6 -0.00127805572973714 0.143753700826756 -0.00889059358045595 0.992910081824071 df.mm.exp7 -0.0890625737591194 0.143753700826756 -0.619549780262372 0.5358451726923 df.mm.exp8 0.0234534719320333 0.143753700826756 0.163150387065848 0.87046798614851 df.mm.trans1:exp2 -0.0289303978864752 0.112769680871817 -0.25654411418757 0.797639507588174 df.mm.trans2:exp2 0.0779743983501286 0.112769680871817 0.691448248743035 0.489614730065159 df.mm.trans1:exp3 -0.150548153346867 0.112769680871817 -1.33500558113659 0.18250081226849 df.mm.trans2:exp3 0.130962544994603 0.112769680871817 1.16132761910948 0.246079926311087 df.mm.trans1:exp4 -0.0759128095252111 0.112769680871817 -0.673166838270119 0.501161787433877 df.mm.trans2:exp4 0.120799627545998 0.112769680871817 1.07120660989817 0.284609304636716 df.mm.trans1:exp5 -0.0992982692581677 0.112769680871817 -0.880540482960471 0.379002701282424 df.mm.trans2:exp5 0.023421828182423 0.112769680871817 0.207696146706721 0.8355534082724 df.mm.trans1:exp6 -0.0722032741337079 0.112769680871817 -0.640272044538107 0.522298114089545 df.mm.trans2:exp6 0.0944362986831215 0.112769680871817 0.837426318430977 0.402765439482351 df.mm.trans1:exp7 0.00714890028024668 0.112769680871817 0.0633938149419143 0.9494790304244 df.mm.trans2:exp7 0.0538203624473598 0.112769680871817 0.477259153624248 0.633392581557032 df.mm.trans1:exp8 0.0219027393672694 0.112769680871817 0.194225426532561 0.846080698546356 df.mm.trans2:exp8 0.0348209939155289 0.112769680871817 0.308779750428746 0.757621664543229 df.mm.trans1:probe2 -0.0318490412792888 0.077208122520191 -0.412508946464277 0.680148704518639 df.mm.trans1:probe3 0.0548225137439513 0.077208122520191 0.710061479990197 0.478007269003726 df.mm.trans1:probe4 0.0148656247517946 0.077208122520191 0.192539648246297 0.847400107908783 df.mm.trans1:probe5 -0.0458329603433507 0.077208122520191 -0.593628738108023 0.553037202619085 df.mm.trans1:probe6 0.0711643188969993 0.077208122520191 0.921720624386233 0.357132583477743 df.mm.trans2:probe2 0.0783884529298943 0.077208122520191 1.01528764553748 0.310474944431629 df.mm.trans2:probe3 0.0361844283185557 0.077208122520191 0.468660901695841 0.639522609728248 df.mm.trans2:probe4 0.103393275279291 0.077208122520191 1.33915023321869 0.181149024872363 df.mm.trans2:probe5 0.13465486814428 0.077208122520191 1.74405054479943 0.0817838188058534 . df.mm.trans2:probe6 -0.0388492199822050 0.077208122520191 -0.503175297029732 0.615069462271813 df.mm.trans3:probe2 0.0202103441005512 0.077208122520191 0.261764480741853 0.793614155589596 df.mm.trans3:probe3 -0.00124140846224689 0.077208122520191 -0.0160787287881821 0.987178195307103 df.mm.trans3:probe4 -0.0758895804683364 0.077208122520191 -0.982922236562484 0.326135780254955 df.mm.trans3:probe5 0.0104236422320635 0.077208122520191 0.135007067803488 0.892662296488636 df.mm.trans3:probe6 -0.0423999131683208 0.077208122520191 -0.549163893439225 0.583145723328049 df.mm.trans3:probe7 0.0103775339570597 0.077208122520191 0.134409873188483 0.893134233013104 df.mm.trans3:probe8 -0.046310689572736 0.077208122520191 -0.599816289544213 0.548908797806324 df.mm.trans3:probe9 -0.0317964411398614 0.077208122520191 -0.411827669187865 0.680647681997102 df.mm.trans3:probe10 0.0854214628978142 0.077208122520191 1.10637922681613 0.269110879904595