fitVsDatCorrelation=0.873322221813724 cont.fitVsDatCorrelation=0.266122132031923 fstatistic=9105.22409667535,60,876 cont.fstatistic=2314.56359391508,60,876 residuals=-0.723015875998561,-0.0977784092123488,-0.00257783993509194,0.0953391483394322,1.28436031856153 cont.residuals=-0.894301217831572,-0.267869165871261,-0.0387124807817783,0.247375449286090,1.27922323960456 predictedValues: Include Exclude Both Lung 78.2189459834483 82.4465149818215 67.32020659452 cerebhem 69.083654639524 62.40471710931 90.1976575751949 cortex 88.8169336296023 73.0907757594755 86.3060161440598 heart 89.722914502298 74.2378273607087 88.0583711331964 kidney 87.235599682374 90.7286059600352 76.1892283671644 liver 81.6697355673729 94.0506544023865 74.974199067364 stomach 77.4027872590497 73.9047486529554 78.8126590562225 testicle 88.380583252257 78.4615660896463 92.2574350313304 diffExp=-4.22756899837327,6.67893753021404,15.7261578701267,15.4850871415894,-3.49300627766125,-12.3809188350136,3.49803860609424,9.9190171626107 diffExpScore=2.21726695645179 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,0 diffExp1.3Score=0 diffExp1.2=0,0,1,1,0,0,0,0 diffExp1.2Score=0.666666666666667 cont.predictedValues: Include Exclude Both Lung 83.0394886973408 89.4960377803988 88.5321461794804 cerebhem 81.1852308202754 99.7823432989213 90.6898221522197 cortex 81.8468613778118 70.393152723195 83.592061561077 heart 85.738145312703 90.5648480712 77.0778688506115 kidney 81.5096276208518 85.7413758538067 89.3995610618508 liver 93.8930832846004 90.1138901576502 78.4369970229187 stomach 86.4906498463996 102.452752159153 94.5465843186367 testicle 82.3729359478768 84.9409433150551 85.5161694918111 cont.diffExp=-6.45654908305801,-18.597112478646,11.4537086546168,-4.82670275849695,-4.23174823295481,3.77919312695016,-15.9621023127532,-2.56800736717835 cont.diffExpScore=1.76715243114819 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,-1,0,0,0,0,0,0 cont.diffExp1.2Score=0.5 tran.correlation=0.385808873053099 cont.tran.correlation=0.240411258693045 tran.covariance=0.0054433881245369 cont.tran.covariance=0.00145122962812977 tran.mean=80.6160353020166 cont.tran.mean=86.8475853917025 weightedLogRatios: wLogRatio Lung -0.230860862036939 cerebhem 0.425466533102247 cortex 0.855334282993387 heart 0.833969336826503 kidney -0.176209290955107 liver -0.631400501745738 stomach 0.200054302467271 testicle 0.526425453511538 cont.weightedLogRatios: wLogRatio Lung -0.333713332173185 cerebhem -0.928132159228814 cortex 0.652685200587276 heart -0.245289879227765 kidney -0.224020609936764 liver 0.185758846983983 stomach -0.769718264435394 testicle -0.135893700266416 varWeightedLogRatios=0.286004322685737 cont.varWeightedLogRatios=0.250048253020048 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.54540213603269 0.0855589713533271 53.1259558657134 3.29242213247868e-276 *** df.mm.trans1 -0.416108070536365 0.0737299713519467 -5.64367600999182 2.24765875871627e-08 *** df.mm.trans2 -0.131445472218447 0.0649867038725235 -2.02265177929761 0.0434124486006190 * df.mm.exp2 -0.695245669848855 0.0832496073038809 -8.35133873137734 2.62108428798603e-16 *** df.mm.exp3 -0.241821045503613 0.0832496073038808 -2.90477100535632 0.00376766205885059 ** df.mm.exp4 -0.236201122299158 0.0832496073038809 -2.837264101883 0.00465522384734809 ** df.mm.exp5 0.081063870606655 0.0832496073038808 0.973744780690108 0.330452079531761 df.mm.exp6 0.0671717354806398 0.0832496073038808 0.806871499530886 0.419959529125815 df.mm.exp7 -0.277474993026205 0.0832496073038809 -3.33304867148928 0.00089500870495379 *** df.mm.exp8 -0.242522912128618 0.0832496073038808 -2.91320187545572 0.00366837670799373 ** df.mm.trans1:exp2 0.571051931969302 0.0767523455590304 7.44018867189022 2.39919707574514e-13 *** df.mm.trans2:exp2 0.416736757217018 0.0558455343094922 7.46231121914765 2.04914917949164e-13 *** df.mm.trans1:exp3 0.368886477138646 0.0767523455590304 4.80619158218343 1.80968140807518e-06 *** df.mm.trans2:exp3 0.121373437845701 0.0558455343094922 2.17337768089132 0.0300191715203396 * df.mm.trans1:exp4 0.373415421634721 0.0767523455590304 4.86519882767005 1.35555874447429e-06 *** df.mm.trans2:exp4 0.131325165421647 0.0558455343094922 2.35157863641974 0.0189145673979164 * df.mm.trans1:exp5 0.0280367360234846 0.0767523455590304 0.365288328575202 0.714984368641338 df.mm.trans2:exp5 0.0146590478981931 0.0558455343094921 0.262492750395290 0.793003290704985 df.mm.trans1:exp6 -0.0240001301444265 0.0767523455590304 -0.312695722451478 0.75458626977138 df.mm.trans2:exp6 0.0645119984180661 0.0558455343094922 1.15518634060416 0.248329124831920 df.mm.trans1:exp7 0.266985889861987 0.0767523455590304 3.47853720843811 0.000528998767384568 *** df.mm.trans2:exp7 0.168102296886128 0.0558455343094922 3.01012961850301 0.00268623796689372 ** df.mm.trans1:exp8 0.364663316968367 0.0767523455590304 4.75116837553719 2.36267132195596e-06 *** df.mm.trans2:exp8 0.192982033217714 0.0558455343094922 3.45563948136338 0.00057536866198036 *** df.mm.trans1:probe2 0.378445165816325 0.0534680283950444 7.0779712133803 2.99812307770012e-12 *** df.mm.trans1:probe3 0.0210298379646246 0.0534680283950444 0.393316129206173 0.694181709382656 df.mm.trans1:probe4 0.00126313298305086 0.0534680283950444 0.0236240800524437 0.981157844500561 df.mm.trans1:probe5 -0.0502290584234257 0.0534680283950444 -0.939422303966628 0.347772919055564 df.mm.trans1:probe6 -0.0338499755942566 0.0534680283950444 -0.633088157733415 0.526841307907672 df.mm.trans1:probe7 0.169004884981015 0.0534680283950444 3.16085874220639 0.00162710908899430 ** df.mm.trans1:probe8 -0.0756252651177641 0.0534680283950444 -1.41440160387087 0.157599339626063 df.mm.trans1:probe9 0.36501908943997 0.0534680283950444 6.82686645452969 1.62051414062061e-11 *** df.mm.trans1:probe10 0.633527866138429 0.0534680283950444 11.8487231557831 3.81347491377751e-30 *** df.mm.trans1:probe11 0.887985821132026 0.0534680283950444 16.6077906327724 4.67667635863953e-54 *** df.mm.trans1:probe12 0.843068246669166 0.0534680283950444 15.7677077680931 1.70894014034703e-49 *** df.mm.trans1:probe13 0.844901567790372 0.0534680283950444 15.8019959432183 1.11942945287403e-49 *** df.mm.trans1:probe14 0.707326734465147 0.0534680283950444 13.2289660886524 1.48321624775519e-36 *** df.mm.trans1:probe15 0.525150154907671 0.0534680283950444 9.82176023076144 1.13642315189479e-21 *** df.mm.trans1:probe16 0.660235791447673 0.0534680283950444 12.3482352214219 2.07719356602492e-32 *** df.mm.trans1:probe17 0.573981065736719 0.0534680283950444 10.7350333080529 2.42361458523131e-25 *** df.mm.trans1:probe18 0.345591986323881 0.0534680283950444 6.46352589944969 1.69640747604565e-10 *** df.mm.trans1:probe19 0.342537957562309 0.0534680283950444 6.4064071155101 2.42922310512771e-10 *** df.mm.trans1:probe20 0.105973204836101 0.0534680283950444 1.98199200563609 0.0477922902629458 * df.mm.trans1:probe21 0.381825971670736 0.0534680283950444 7.14120163267745 1.94425919842198e-12 *** df.mm.trans1:probe22 -0.0299758331669981 0.0534680283950444 -0.560630980172374 0.57519248408431 df.mm.trans2:probe2 0.396185600010658 0.0534680283950444 7.40976639504025 2.97833044929755e-13 *** df.mm.trans2:probe3 0.292866358620843 0.0534680283950444 5.47741084554348 5.64118533401876e-08 *** df.mm.trans2:probe4 -0.281469001349399 0.0534680283950444 -5.26424874449806 1.77166419149418e-07 *** df.mm.trans2:probe5 -0.0689011948890327 0.0534680283950444 -1.28864289477745 0.197862485674674 df.mm.trans2:probe6 -0.36939878977561 0.0534680283950444 -6.90877896312794 9.3994589542096e-12 *** df.mm.trans3:probe2 -0.3067264767366 0.0534680283950444 -5.73663338528914 1.32966480591035e-08 *** df.mm.trans3:probe3 0.71795788464688 0.0534680283950444 13.4277979981290 1.61813986327988e-37 *** df.mm.trans3:probe4 0.240169446324024 0.0534680283950444 4.49183284914772 8.00635381541257e-06 *** df.mm.trans3:probe5 0.580415672897226 0.0534680283950444 10.8553782572432 7.6261325792073e-26 *** df.mm.trans3:probe6 0.20083465538566 0.0534680283950444 3.75616347589645 0.000183944276867769 *** df.mm.trans3:probe7 0.325156420532045 0.0534680283950444 6.0813243033697 1.77837549430015e-09 *** df.mm.trans3:probe8 0.106711510964108 0.0534680283950444 1.99580037205932 0.0462648905113333 * df.mm.trans3:probe9 0.0920910118830226 0.0534680283950444 1.72235660538322 0.085357904560647 . df.mm.trans3:probe10 0.138558285346659 0.0534680283950444 2.59142312716174 0.00971703204521129 ** df.mm.trans3:probe11 0.232561882471683 0.0534680283950444 4.34955036593863 1.52459219061378e-05 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.21139075599675 0.169300713656959 24.8752097083889 9.41542909668061e-104 *** df.mm.trans1 0.148874506351787 0.145893955599856 1.02042956981786 0.307806500602705 df.mm.trans2 0.287679576264096 0.128593123196821 2.23713033101919 0.0255286569487122 * df.mm.exp2 0.0621345585244118 0.164731035276297 0.377187931953418 0.706125304528122 df.mm.exp3 -0.197147501199860 0.164731035276297 -1.19678420565495 0.231714460319163 df.mm.exp4 0.182402886102225 0.164731035276297 1.10727699729616 0.268478136617722 df.mm.exp5 -0.0712040169595682 0.164731035276297 -0.432244093167633 0.665670393594752 df.mm.exp6 0.250790426678896 0.164731035276297 1.52242366630098 0.128263842529193 df.mm.exp7 0.110200486748851 0.164731035276297 0.668972222289603 0.50368945206708 df.mm.exp8 -0.0256372047652351 0.164731035276297 -0.155630690490319 0.87635998656235 df.mm.trans1:exp2 -0.0847174764429332 0.15187451032257 -0.557812342986323 0.577115051593443 df.mm.trans2:exp2 0.0466623345974062 0.110504937864514 0.42226470146173 0.672935436263074 df.mm.trans1:exp3 0.182681196163268 0.15187451032257 1.20284302991507 0.229362067292492 df.mm.trans2:exp3 -0.0429508565118273 0.110504937864514 -0.388678165354815 0.697608684483482 df.mm.trans1:exp4 -0.150421318788360 0.15187451032257 -0.990431629829633 0.322236680991372 df.mm.trans2:exp4 -0.170531092415909 0.110504937864514 -1.54319884442621 0.123143688090356 df.mm.trans1:exp5 0.0526088984537528 0.15187451032257 0.346397156060062 0.729127446312244 df.mm.trans2:exp5 0.0283451711235817 0.110504937864514 0.256505923367284 0.797620434705238 df.mm.trans1:exp6 -0.127949965711629 0.15187451032257 -0.842471626343836 0.399753966115002 df.mm.trans2:exp6 -0.243910463845488 0.110504937864514 -2.20723588066749 0.0275561807921502 * df.mm.trans1:exp7 -0.0694804350078948 0.15187451032257 -0.457485820762969 0.64743533095523 df.mm.trans2:exp7 0.0250068973217879 0.110504937864514 0.226296650674994 0.821023494106775 df.mm.trans1:exp8 0.0175778784025529 0.15187451032257 0.115739490222676 0.907885533469318 df.mm.trans2:exp8 -0.0266009184386062 0.110504937864514 -0.240721536545458 0.809827271726235 df.mm.trans1:probe2 0.118932777830116 0.105800423052416 1.12412383995094 0.261268435268777 df.mm.trans1:probe3 0.161813563552805 0.105800423052416 1.52942265148258 0.126520703250772 df.mm.trans1:probe4 0.0504248194381814 0.105800423052416 0.476603192911618 0.6337635679137 df.mm.trans1:probe5 0.077681080434773 0.105800423052416 0.734222777127158 0.463009449032909 df.mm.trans1:probe6 0.132045779673057 0.105800423052416 1.24806476064503 0.212340830864274 df.mm.trans1:probe7 0.0893082588019248 0.105800423052416 0.844120053827001 0.398832777442179 df.mm.trans1:probe8 0.0629904818789696 0.105800423052416 0.595370794006775 0.551749415182484 df.mm.trans1:probe9 0.0132582198053700 0.105800423052416 0.125313485739103 0.90030412826322 df.mm.trans1:probe10 0.0954549230525084 0.105800423052416 0.902216837121887 0.367189692194838 df.mm.trans1:probe11 0.10526329432058 0.105800423052416 0.9949231891864 0.320048361820409 df.mm.trans1:probe12 0.0388817955328238 0.105800423052416 0.367501323823260 0.713333872496521 df.mm.trans1:probe13 0.0186729974433334 0.105800423052416 0.176492653853400 0.859947713518855 df.mm.trans1:probe14 -0.0223908985863947 0.105800423052416 -0.211633355901627 0.83244231093214 df.mm.trans1:probe15 0.0163445105774566 0.105800423052416 0.154484359380673 0.877263426844591 df.mm.trans1:probe16 0.101424365574837 0.105800423052416 0.958638563520576 0.338005359083767 df.mm.trans1:probe17 0.203507257177942 0.105800423052416 1.92350135572823 0.0547409267198317 . df.mm.trans1:probe18 0.181777996361838 0.105800423052416 1.71812163994638 0.0861277972712736 . df.mm.trans1:probe19 0.218261653036454 0.105800423052416 2.06295633551788 0.0394110055539722 * df.mm.trans1:probe20 0.0641941494353918 0.105800423052416 0.606747568519537 0.544175661730946 df.mm.trans1:probe21 0.130785611305411 0.105800423052416 1.23615395413510 0.216732693539843 df.mm.trans1:probe22 0.090050354919852 0.105800423052416 0.851134166781535 0.394927423562809 df.mm.trans2:probe2 -0.0177460954855513 0.105800423052416 -0.167731800814818 0.866832991218222 df.mm.trans2:probe3 0.0747297157085499 0.105800423052416 0.706327191825378 0.480172499864434 df.mm.trans2:probe4 0.0518726989611612 0.105800423052416 0.490288199844553 0.624052750500356 df.mm.trans2:probe5 -0.0741127073947179 0.105800423052416 -0.700495378529827 0.483803994522204 df.mm.trans2:probe6 -0.117635247480708 0.105800423052416 -1.11185989702923 0.266503440999380 df.mm.trans3:probe2 -0.145238034217743 0.105800423052416 -1.37275475870062 0.170179921436165 df.mm.trans3:probe3 -0.230664214704819 0.105800423052416 -2.18018234757477 0.0295094849102095 * df.mm.trans3:probe4 -0.312443582505896 0.105800423052416 -2.95314114529678 0.0032296446782157 ** df.mm.trans3:probe5 -0.246910742128932 0.105800423052416 -2.33374059389732 0.0198346661575780 * df.mm.trans3:probe6 -0.124929615114787 0.105800423052416 -1.18080449501505 0.238000900065368 df.mm.trans3:probe7 -0.118990783279472 0.105800423052416 -1.12467209342368 0.261036081699915 df.mm.trans3:probe8 -0.0769408508761105 0.105800423052416 -0.727226306439174 0.467281634965659 df.mm.trans3:probe9 -0.282753675106484 0.105800423052416 -2.67251932410895 0.00766831919676697 ** df.mm.trans3:probe10 -0.0970986478287356 0.105800423052416 -0.917752926003242 0.359000837154825 df.mm.trans3:probe11 -0.174400161979497 0.105800423052416 -1.64838813445098 0.0996316205140523 .