fitVsDatCorrelation=0.904255577148413 cont.fitVsDatCorrelation=0.241809978399268 fstatistic=7219.9290842492,52,692 cont.fstatistic=1387.36994149618,52,692 residuals=-0.819882402861446,-0.093650075469896,-0.00613967445259646,0.0878166218199753,1.34202683986580 cont.residuals=-0.714722578248167,-0.297007302613925,-0.101607881326655,0.192482058897104,1.83792394104213 predictedValues: Include Exclude Both Lung 79.8819485009186 73.9463247987836 51.9072258420424 cerebhem 69.9673273893945 58.0992417305066 62.668360470305 cortex 74.2297109673365 62.8344222094627 48.3563256758312 heart 94.2896699374352 67.429292723277 52.5281275688627 kidney 89.8825757168735 80.6941655697942 51.444286499714 liver 86.6844810174663 81.2559363428782 52.5773350061622 stomach 73.3806407151068 69.5162960789704 49.0362624414946 testicle 82.7570518970683 66.8082823498567 49.3008916449736 diffExp=5.93562370213503,11.8680856588879,11.3952887578738,26.8603772141581,9.18841014707937,5.42854467458812,3.86434463613641,15.9487695472116 diffExpScore=0.989069777314366 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,1,0,0,0,0 diffExp1.3Score=0.5 diffExp1.2=0,1,0,1,0,0,0,1 diffExp1.2Score=0.75 cont.predictedValues: Include Exclude Both Lung 73.0789018619482 73.8269966876247 74.1620458185308 cerebhem 76.2333269998803 67.3343049395608 76.4434197773522 cortex 80.8869727791078 65.5284668739575 79.4933455084587 heart 75.5854354942 76.2219357166696 68.4301217731732 kidney 77.580521681653 72.347238540878 69.8534333034576 liver 80.5618138415106 78.35015633826 71.0226385381324 stomach 82.5694120890845 80.0330501497104 67.3604726346615 testicle 87.8246763923006 66.6221035712003 69.2072843100614 cont.diffExp=-0.74809482567656,8.89902206031951,15.3585059051503,-0.636500222469664,5.23328314077504,2.21165750325054,2.53636193937413,21.2025728211003 cont.diffExpScore=1.03213390224059 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,1 cont.diffExp1.3Score=0.5 cont.diffExp1.2=0,0,1,0,0,0,0,1 cont.diffExp1.2Score=0.666666666666667 tran.correlation=0.607103047210192 cont.tran.correlation=-0.193496863327105 tran.covariance=0.0078355534348093 cont.tran.covariance=-0.000909572206684524 tran.mean=75.7285854965706 cont.tran.mean=75.9115821223467 weightedLogRatios: wLogRatio Lung 0.335243337242547 cerebhem 0.772330640762844 cortex 0.703950216807036 heart 1.46815212047979 kidney 0.479294418989644 liver 0.286488566010270 stomach 0.230927352589479 testicle 0.922451841852555 cont.weightedLogRatios: wLogRatio Lung -0.0437602036426594 cerebhem 0.530245638687626 cortex 0.90286742154434 heart -0.0363054326174465 kidney 0.301453279438336 liver 0.121788958138273 stomach 0.137217169633465 testicle 1.19839192878504 varWeightedLogRatios=0.171064677126830 cont.varWeightedLogRatios=0.207107459740878 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.30826677757343 0.103507915153385 41.6225828835326 1.43101499385626e-190 *** df.mm.trans1 -0.125035961922814 0.0929652447038656 -1.34497534343191 0.1790738160768 df.mm.trans2 -0.0344747705266308 0.0854941683432386 -0.403241194045223 0.686895355890553 df.mm.exp2 -0.562107092245485 0.117105837938305 -4.79999205967531 1.94527088602839e-06 *** df.mm.exp3 -0.165360893075592 0.117105837938305 -1.41206361686861 0.158380746393612 df.mm.exp4 0.0616709994261715 0.117105837938305 0.526626174338652 0.598621967831636 df.mm.exp5 0.214239588700505 0.117105837938305 1.82945267693122 0.067761943159873 . df.mm.exp6 0.163162235348464 0.117105837938305 1.39328865427208 0.163979880234818 df.mm.exp7 -0.0897701066733905 0.117105837938305 -0.766572429298397 0.443597197849771 df.mm.exp8 -0.0146372607707521 0.117105837938305 -0.124991725676935 0.900566401689321 df.mm.trans1:exp2 0.429585572651468 0.112120303718653 3.83146993366553 0.000138963664427826 *** df.mm.trans2:exp2 0.320920215447689 0.0975881982819205 3.28851460624972 0.00105814452923327 ** df.mm.trans1:exp3 0.0919754793519705 0.112120303718653 0.820328489144724 0.412311344804004 df.mm.trans2:exp3 0.00252445127850828 0.0975881982819205 0.025868407481153 0.979369756578921 df.mm.trans1:exp4 0.104150738439963 0.112120303718653 0.928919517568479 0.353254701275054 df.mm.trans2:exp4 -0.153930955246354 0.0975881982819205 -1.57735215893284 0.115171519516856 df.mm.trans1:exp5 -0.0962853856087737 0.112120303718653 -0.8587685050371 0.39076561086791 df.mm.trans2:exp5 -0.126912803270733 0.0975881982819205 -1.30049335375675 0.193864864152099 df.mm.trans1:exp6 -0.0814372650229324 0.112120303718653 -0.72633824848785 0.467877038555306 df.mm.trans2:exp6 -0.0688978435864426 0.0975881982819205 -0.706005898248117 0.480422080870184 df.mm.trans1:exp7 0.00488035592933084 0.112120303718653 0.0435278514904602 0.96529331991352 df.mm.trans2:exp7 0.0279918182549005 0.0975881982819205 0.286836100550145 0.774323680610814 df.mm.trans1:exp8 0.0499965895960119 0.112120303718653 0.445919141652253 0.655795137866796 df.mm.trans2:exp8 -0.0868751685595855 0.0975881982819205 -0.890222076942272 0.373656036820429 df.mm.trans1:probe2 0.646208193369906 0.0560601518593267 11.5270503546165 3.03250364678855e-28 *** df.mm.trans1:probe3 0.0331656870948013 0.0560601518593267 0.591608941374703 0.554305697338245 df.mm.trans1:probe4 -0.178092415830715 0.0560601518593267 -3.17680937214740 0.00155523039691104 ** df.mm.trans1:probe5 0.210779930121267 0.0560601518593267 3.75988867547457 0.000184352339021898 *** df.mm.trans1:probe6 0.166002388172819 0.0560601518593267 2.96114767204651 0.00316986796811218 ** df.mm.trans1:probe7 0.0169468763097752 0.0560601518593267 0.302298080681275 0.762515677519006 df.mm.trans1:probe8 -0.179731837222129 0.0560601518593267 -3.20605334200904 0.00140758891674792 ** df.mm.trans1:probe9 -0.0926989734163976 0.0560601518593267 -1.65356265264871 0.0986699373741294 . df.mm.trans1:probe10 -0.128508666233296 0.0560601518593267 -2.29233532145555 0.0221855862937157 * df.mm.trans1:probe11 -0.136501343537712 0.0560601518593267 -2.43490855822579 0.0151472032844716 * df.mm.trans1:probe12 -0.209124193257780 0.0560601518593267 -3.73035367050986 0.000206880411112864 *** df.mm.trans1:probe13 -0.153020159999919 0.0560601518593267 -2.72957091489686 0.00650288841250317 ** df.mm.trans1:probe14 -0.219228281679269 0.0560601518593267 -3.91059022154248 0.000101141308790998 *** df.mm.trans1:probe15 0.0597455488331933 0.0560601518593267 1.06574004621169 0.286912864660116 df.mm.trans1:probe16 0.0742295183383537 0.0560601518593267 1.32410483875641 0.185905414287493 df.mm.trans1:probe17 0.854706817733204 0.0560601518593267 15.2462451382212 1.82404099767366e-45 *** df.mm.trans1:probe18 0.795663067191922 0.0560601518593267 14.1930237575614 2.57527723918746e-40 *** df.mm.trans1:probe19 0.74735831448666 0.0560601518593267 13.3313644308711 2.98296251448622e-36 *** df.mm.trans1:probe20 0.86733247065579 0.0560601518593267 15.4714613123456 1.36775084509130e-46 *** df.mm.trans1:probe21 0.774180288150151 0.0560601518593267 13.8098143239573 1.72071462241760e-38 *** df.mm.trans1:probe22 0.983563906975739 0.0560601518593267 17.5447956231696 2.75377246105126e-57 *** df.mm.trans2:probe2 0.0255989060278083 0.0560601518593267 0.456632834175055 0.648078266547459 df.mm.trans2:probe3 0.165673370351895 0.0560601518593267 2.95527865796053 0.00323002387204653 ** df.mm.trans2:probe4 0.0357716931872725 0.0560601518593267 0.638094832083855 0.523623045464434 df.mm.trans2:probe5 -0.0131818691160167 0.0560601518593267 -0.235137948771426 0.814171228779054 df.mm.trans2:probe6 0.0520652412719319 0.0560601518593267 0.928738855409822 0.353348275971379 df.mm.trans3:probe2 -0.285520033270418 0.0560601518593267 -5.09310131707958 4.54707335009573e-07 *** df.mm.trans3:probe3 -0.312374081928462 0.0560601518593267 -5.57212336335284 3.60647731564796e-08 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.26762376370762 0.235218136571253 18.1432598094529 1.7942581875092e-60 *** df.mm.trans1 0.0471079268321177 0.211260284710881 0.222985247305650 0.823612791445811 df.mm.trans2 0.0159531633083735 0.194282523569387 0.0821132184989142 0.934580426245735 df.mm.exp2 -0.080093959667287 0.266118943084154 -0.300970531218287 0.76352737305391 df.mm.exp3 -0.08714754540292 0.266118943084154 -0.327475918823868 0.74340699655085 df.mm.exp4 0.146088128563508 0.266118943084154 0.548958021817 0.583211337961158 df.mm.exp5 0.0993827627587016 0.266118943084154 0.373452417956109 0.708926129622583 df.mm.exp6 0.200202377941984 0.266118943084154 0.752304122441499 0.452124004133644 df.mm.exp7 0.299008917086424 0.266118943084154 1.12359125442592 0.261576101836462 df.mm.exp8 0.150261128774868 0.266118943084154 0.564638980725815 0.572502322515465 df.mm.trans1:exp2 0.122352984070757 0.254789489996235 0.480212052987605 0.631228376348706 df.mm.trans2:exp2 -0.0119606753983812 0.221765785903462 -0.0539338173814957 0.957003459820356 df.mm.trans1:exp3 0.188660622935133 0.254789489996235 0.740456849055747 0.459273989643996 df.mm.trans2:exp3 -0.0320922710983098 0.221765785903462 -0.14471245403148 0.884980041808057 df.mm.trans1:exp4 -0.112364221008274 0.254789489996235 -0.441008069092389 0.659344900864486 df.mm.trans2:exp4 -0.114163310490221 0.221765785903462 -0.514792261687826 0.606862575805098 df.mm.trans1:exp5 -0.0396060812119877 0.254789489996236 -0.155446291024692 0.876514823837792 df.mm.trans2:exp5 -0.119629951959477 0.221765785903462 -0.539442779561829 0.589754891573218 df.mm.trans1:exp6 -0.102717319251454 0.254789489996235 -0.40314582541443 0.686965475793684 df.mm.trans2:exp6 -0.140738887249031 0.221765785903462 -0.634628496346578 0.525880490719863 df.mm.trans1:exp7 -0.176909323711324 0.254789489996235 -0.694335247948954 0.487705023117012 df.mm.trans2:exp7 -0.218293714344685 0.221765785903462 -0.984343520148375 0.325290667239119 df.mm.trans1:exp8 0.0335416798051967 0.254789489996235 0.131644675789776 0.895303611383608 df.mm.trans2:exp8 -0.252949194326973 0.221765785903462 -1.14061415423696 0.254425120872499 df.mm.trans1:probe2 -0.081966182276345 0.127394744998118 -0.643403166100423 0.520175683125774 df.mm.trans1:probe3 -0.135060336855100 0.127394744998118 -1.06017196280032 0.289436260887857 df.mm.trans1:probe4 0.0794918532226247 0.127394744998118 0.623980629843085 0.532845942921909 df.mm.trans1:probe5 -0.0125125845327263 0.127394744998118 -0.098219000578958 0.921786837457716 df.mm.trans1:probe6 -0.0988278949810942 0.127394744998118 -0.775761158614152 0.438155056093343 df.mm.trans1:probe7 -0.113068987455619 0.127394744998118 -0.887548285114037 0.375092151465219 df.mm.trans1:probe8 -0.023754835247209 0.127394744998118 -0.186466366784281 0.852133701361967 df.mm.trans1:probe9 -0.094041209010533 0.127394744998118 -0.738187505394531 0.460650776455998 df.mm.trans1:probe10 0.0869213039217717 0.127394744998118 0.682298974914986 0.495278238077656 df.mm.trans1:probe11 -0.00345023792456202 0.127394744998118 -0.0270830474570438 0.97840130419065 df.mm.trans1:probe12 -0.166009900609421 0.127394744998118 -1.30311419526664 0.192969200765878 df.mm.trans1:probe13 -0.0288096299655031 0.127394744998118 -0.226144571080454 0.821155757834663 df.mm.trans1:probe14 0.0577939035510955 0.127394744998118 0.453660027750355 0.650215773597555 df.mm.trans1:probe15 -0.035677902574477 0.127394744998118 -0.280057882882093 0.779516791852032 df.mm.trans1:probe16 -0.0372642245128467 0.127394744998118 -0.292509903084286 0.769984470306509 df.mm.trans1:probe17 -0.0755048775940904 0.127394744998118 -0.592684396795221 0.553586008378026 df.mm.trans1:probe18 0.0402168293021657 0.127394744998118 0.315686720851475 0.75233549059227 df.mm.trans1:probe19 -0.173191310851604 0.127394744998118 -1.35948551766529 0.174435610727887 df.mm.trans1:probe20 0.0231093181558591 0.127394744998118 0.181399304627522 0.85610728298403 df.mm.trans1:probe21 0.0463003953767142 0.127394744998118 0.363440386629749 0.716386935762447 df.mm.trans1:probe22 0.165506869300203 0.127394744998118 1.29916559197672 0.194319787687118 df.mm.trans2:probe2 0.167771134663700 0.127394744998118 1.31693920864773 0.188294938073779 df.mm.trans2:probe3 0.044505310025673 0.127394744998118 0.349349653522447 0.726933106802033 df.mm.trans2:probe4 0.0124125256393958 0.127394744998118 0.0974335765543485 0.922410294090397 df.mm.trans2:probe5 0.0489119920229975 0.127394744998118 0.383940420962578 0.701140545681245 df.mm.trans2:probe6 -0.110273044084741 0.127394744998118 -0.865601199534335 0.387008886893044 df.mm.trans3:probe2 -0.0477140395362277 0.127394744998118 -0.374536952343935 0.708119613915265 df.mm.trans3:probe3 -0.0255829997275223 0.127394744998118 -0.200816758398475 0.840900865898407