fitVsDatCorrelation=0.88758284123876 cont.fitVsDatCorrelation=0.241099157754801 fstatistic=8728.42555671588,57,807 cont.fstatistic=1955.48229062833,57,807 residuals=-0.825595571287838,-0.088778880071562,-0.00341408003222285,0.0889550467649052,0.884554836939468 cont.residuals=-0.772244616342354,-0.244172276956908,-0.0804723498524977,0.141957358106994,1.60506719618432 predictedValues: Include Exclude Both Lung 59.2269673850047 67.0542798421182 81.585137900263 cerebhem 66.6351772190666 79.3281002249016 114.178614236038 cortex 57.9324962869248 67.8455732200696 106.828529479567 heart 58.7694072250543 75.8761237089976 101.98362052138 kidney 58.5709837658781 73.8540682021026 90.6040638336784 liver 58.4360923082397 74.7413763279248 100.929899935587 stomach 60.323880666951 69.8065698612092 84.8472844144121 testicle 59.520077998303 123.196668724422 231.459627822165 diffExp=-7.82731245711356,-12.6929230058350,-9.91307693314482,-17.1067164839433,-15.2830844362245,-16.3052840196851,-9.48268919425821,-63.6765907261193 diffExpScore=0.993476318397546 diffExp1.5=0,0,0,0,0,0,0,-1 diffExp1.5Score=0.5 diffExp1.4=0,0,0,0,0,0,0,-1 diffExp1.4Score=0.5 diffExp1.3=0,0,0,0,0,0,0,-1 diffExp1.3Score=0.5 diffExp1.2=0,0,0,-1,-1,-1,0,-1 diffExp1.2Score=0.8 cont.predictedValues: Include Exclude Both Lung 80.067246036141 74.1574329408348 79.0865416626943 cerebhem 74.4259053246193 78.1352582324781 64.94279030322 cortex 69.5155916136295 74.8717378435851 68.2256752809457 heart 71.1536170663216 81.8288518773964 66.659660972926 kidney 74.4182489805951 74.8743760835231 72.8808327716615 liver 75.2780131106059 79.147490257071 68.7376299024103 stomach 68.3199046591687 70.0273489508143 73.6427844773532 testicle 73.7267307066798 78.4329113748642 68.0826907004734 cont.diffExp=5.9098130953062,-3.70935290785887,-5.35614622995564,-10.6752348110748,-0.456127102928008,-3.86947714646512,-1.70744429164559,-4.70618066818443 cont.diffExpScore=1.42313502908809 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.077926240214455 cont.tran.correlation=0.180774237328061 tran.covariance=0.00103687147640166 cont.tran.covariance=0.000522460165687509 tran.mean=69.444865185448 cont.tran.mean=74.8987915661455 weightedLogRatios: wLogRatio Lung -0.514306400493177 cerebhem -0.747378007316547 cortex -0.653661026713838 heart -1.07336652512947 kidney -0.970569440799751 liver -1.03140161432668 stomach -0.609218606710821 testicle -3.23726879407495 cont.weightedLogRatios: wLogRatio Lung 0.33312346962117 cerebhem -0.210800174034176 cortex -0.317585617105628 heart -0.605947189053448 kidney -0.0263532271499361 liver -0.217855704428638 stomach -0.104577852460267 testicle -0.268013317569832 varWeightedLogRatios=0.785339522944042 cont.varWeightedLogRatios=0.0718599911604428 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.78977887880842 0.0835569454359163 45.3556417008443 3.52103979276331e-224 *** df.mm.trans1 0.344783040443457 0.072235374208663 4.77304982801776 2.15407768845323e-06 *** df.mm.trans2 0.439955217921237 0.064152674417117 6.85794040417822 1.38973407249145e-11 *** df.mm.exp2 -0.0501712647575066 0.0829895963555042 -0.604548846611893 0.545648733177299 df.mm.exp3 -0.279944699476742 0.0829895963555043 -3.37325052501204 0.000778269694356819 *** df.mm.exp4 -0.107321018580979 0.0829895963555043 -1.29318641485188 0.196316654605135 df.mm.exp5 -0.0194008503280241 0.0829895963555042 -0.233774487164828 0.815219346205068 df.mm.exp6 -0.117690953955134 0.0829895963555042 -1.41814105771739 0.156535613708069 df.mm.exp7 0.0193709042863380 0.0829895963555043 0.233413646252217 0.815499410737809 df.mm.exp8 -0.429542047132062 0.0829895963555042 -5.17585415516451 2.86574335231345e-07 *** df.mm.trans1:exp2 0.168026921015241 0.0766771118286529 2.19135693830936 0.0287111422932813 * df.mm.trans2:exp2 0.218261245737130 0.0579624483283727 3.76556291239841 0.000178237378292231 *** df.mm.trans1:exp3 0.257846206773806 0.0766771118286529 3.36275324701853 0.00080804296320056 *** df.mm.trans2:exp3 0.291676401708153 0.0579624483283727 5.03216151353249 5.98191067026697e-07 *** df.mm.trans1:exp4 0.0995654844823086 0.0766771118286529 1.29850332267083 0.194485370178030 df.mm.trans2:exp4 0.230920639557847 0.0579624483283727 3.98396972898073 7.39020262970641e-05 *** df.mm.trans1:exp5 0.0082632983814188 0.0766771118286529 0.107767470426957 0.914206934105588 df.mm.trans2:exp5 0.115989506859441 0.0579624483283727 2.00111469071025 0.0457144837917037 * df.mm.trans1:exp6 0.104247703551238 0.0766771118286529 1.35956742585971 0.174346600695477 df.mm.trans2:exp6 0.226222354423768 0.0579624483283727 3.90291233286348 0.000102972294005473 *** df.mm.trans1:exp7 -0.00101981631142036 0.0766771118286529 -0.013300139860501 0.989391623862506 df.mm.trans2:exp7 0.0208547868422953 0.0579624483283727 0.359798239096929 0.719092154655133 df.mm.trans1:exp8 0.434478779791696 0.0766771118286529 5.66634252947096 2.02990931981902e-08 *** df.mm.trans2:exp8 1.03782161999502 0.0579624483283727 17.9050687113057 1.25994771753884e-60 *** df.mm.trans1:probe2 -0.160966701978523 0.0514365703101663 -3.1294213632029 0.00181451399812961 ** df.mm.trans1:probe3 -0.140960062846988 0.0514365703101663 -2.74046387612916 0.00627081909728143 ** df.mm.trans1:probe4 0.00483436468819407 0.0514365703101663 0.0939869174605246 0.925142878695708 df.mm.trans1:probe5 -0.25395142703959 0.0514365703101663 -4.93717651679037 9.63364410201536e-07 *** df.mm.trans1:probe6 -0.305627825839814 0.0514365703101663 -5.94183912334853 4.18946470712012e-09 *** df.mm.trans1:probe7 -0.245512228523649 0.0514365703101663 -4.77310650852482 2.15348799110645e-06 *** df.mm.trans1:probe8 -0.0663588937549471 0.0514365703101663 -1.29011116710928 0.197381611965969 df.mm.trans1:probe9 -0.0740964328749315 0.0514365703101663 -1.44053991990766 0.150102553352531 df.mm.trans1:probe10 -0.051447440394024 0.0514365703101663 -1.00021132987274 0.317508057611251 df.mm.trans1:probe11 -0.168419040640381 0.0514365703101663 -3.27430541392636 0.00110434804903635 ** df.mm.trans1:probe12 -0.132523371946760 0.0514365703101663 -2.57644261947548 0.0101589346794145 * df.mm.trans1:probe13 -0.211857171107742 0.0514365703101663 -4.1188043804287 4.20106135432826e-05 *** df.mm.trans1:probe14 -0.0921160968922396 0.0514365703101663 -1.79086778797211 0.0736892016530869 . df.mm.trans1:probe15 0.0563880318884147 0.0514365703101663 1.09626344735644 0.273290532666513 df.mm.trans1:probe16 -0.0189488514629357 0.0514365703101663 -0.368392592054111 0.712677134618744 df.mm.trans1:probe17 0.0343727222014224 0.0514365703101663 0.66825455107431 0.504162200188946 df.mm.trans1:probe18 -0.00333111682960591 0.0514365703101663 -0.064761643506148 0.948379819857878 df.mm.trans1:probe19 -0.00570667035447559 0.0514365703101663 -0.110945778850805 0.911686929437328 df.mm.trans1:probe20 0.103376635887166 0.0514365703101663 2.00978866327589 0.0447859740430264 * df.mm.trans1:probe21 0.137303049856413 0.0514365703101663 2.6693663482706 0.0077521651590738 ** df.mm.trans2:probe2 -0.068399959094714 0.0514365703101663 -1.32979237694615 0.183962422081288 df.mm.trans2:probe3 0.0400455272425284 0.0514365703101663 0.77854194012258 0.436477803966297 df.mm.trans2:probe4 -0.204338154926173 0.0514365703101663 -3.97262402399691 7.74417018229e-05 *** df.mm.trans2:probe5 -0.0229769372192291 0.0514365703101663 -0.446704301641351 0.655208424129732 df.mm.trans2:probe6 -0.107805352501331 0.0514365703101663 -2.09588920589488 0.0364029783697073 * df.mm.trans3:probe2 -0.145714452987317 0.0514365703101663 -2.83289597476364 0.00472782437145043 ** df.mm.trans3:probe3 -0.0899619073167014 0.0514365703101663 -1.74898728228232 0.0806733849666012 . df.mm.trans3:probe4 -0.0776856731687566 0.0514365703101663 -1.51031985026035 0.131353263482306 df.mm.trans3:probe5 -0.440263087488713 0.0514365703101663 -8.55933987888177 5.68850134214401e-17 *** df.mm.trans3:probe6 -0.374073546865338 0.0514365703101663 -7.27252117724114 8.35445524702285e-13 *** df.mm.trans3:probe7 -0.114982481911401 0.0514365703101663 -2.23542279778858 0.0256624006075735 * df.mm.trans3:probe8 -0.231340623334256 0.0514365703101663 -4.49759037080534 7.88065234860143e-06 *** df.mm.trans3:probe9 -0.0818084552268381 0.0514365703101663 -1.5904725904843 0.112119958768213 cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.47656382192464 0.176039043562586 25.4293805017926 3.11966353090807e-105 *** df.mm.trans1 -0.0435389930925836 0.152186585097599 -0.286089559501329 0.774882950449074 df.mm.trans2 -0.110875510666359 0.135157830237256 -0.82034100778126 0.412263971556712 df.mm.exp2 0.176224297154410 0.174843743890478 1.00789592600348 0.31380653140808 df.mm.exp3 0.0159921446472816 0.174843743890478 0.0914653523851501 0.927145534082107 df.mm.exp4 0.151356621758747 0.174843743890478 0.865667929494555 0.386929565739588 df.mm.exp5 0.0181727923008384 0.174843743890478 0.103937332251486 0.917244905122733 df.mm.exp6 0.143689941488325 0.174843743890478 0.821819175745471 0.411422548559372 df.mm.exp7 -0.144653594238210 0.174843743890478 -0.827330684069658 0.408294226049071 df.mm.exp8 0.123371605111487 0.174843743890478 0.705610634766359 0.48063393486322 df.mm.trans1:exp2 -0.249287083112296 0.161544505475130 -1.54314801595449 0.123186889330182 df.mm.trans2:exp2 -0.123973197855240 0.122116167758887 -1.01520707806700 0.310311396194215 df.mm.trans1:exp3 -0.157307934512432 0.161544505475130 -0.973774589545854 0.330460260640310 df.mm.trans2:exp3 -0.00640596270635364 0.122116167758887 -0.0524579408600663 0.958176789632536 df.mm.trans1:exp4 -0.269382318361442 0.161544505475130 -1.66754243710823 0.0957945610529003 . df.mm.trans2:exp4 -0.0529170334141647 0.122116167758887 -0.433333557589581 0.66488826271937 df.mm.trans1:exp5 -0.091338455581205 0.161544505475130 -0.565407379920247 0.571953862056604 df.mm.trans2:exp5 -0.00855137418757728 0.122116167758887 -0.0700265521307676 0.944189874439335 df.mm.trans1:exp6 -0.205368696922973 0.161544505475130 -1.27128246373313 0.203994468667057 df.mm.trans2:exp6 -0.0785671698688137 0.122116167758887 -0.643380572046291 0.52015996430692 df.mm.trans1:exp7 -0.0140121088263688 0.161544505475130 -0.0867383807648348 0.930900984429524 df.mm.trans2:exp7 0.0873491537684996 0.122116167758887 0.71529556955117 0.474633313971963 df.mm.trans1:exp8 -0.205873032558731 0.161544505475130 -1.27440442467061 0.202886969503692 df.mm.trans2:exp8 -0.0673182834100554 0.122116167758887 -0.551264297312148 0.581605101073399 df.mm.trans1:probe2 -0.0345239862439402 0.108367348690193 -0.318582918759408 0.75012524054826 df.mm.trans1:probe3 -0.148267534791081 0.108367348690193 -1.36819380175994 0.171632230526869 df.mm.trans1:probe4 -0.0830778136288921 0.108367348690193 -0.766631412810512 0.44352489342211 df.mm.trans1:probe5 0.0341342619000523 0.108367348690193 0.314986592480336 0.752853260014494 df.mm.trans1:probe6 -0.130715858290690 0.108367348690193 -1.20622918130430 0.228082639079164 df.mm.trans1:probe7 -0.194022450173607 0.108367348690193 -1.79041429469950 0.0737620861160727 . df.mm.trans1:probe8 -0.000354545081568799 0.108367348690193 -0.00327169655670356 0.997390377053932 df.mm.trans1:probe9 0.0215011565441898 0.108367348690193 0.198409915939335 0.84277433120744 df.mm.trans1:probe10 -0.099546299515235 0.108367348690193 -0.918600489154937 0.358579044296747 df.mm.trans1:probe11 0.0301111729008138 0.108367348690193 0.277862042993203 0.781189432425453 df.mm.trans1:probe12 0.0265552280211662 0.108367348690193 0.245048239549385 0.806481377991266 df.mm.trans1:probe13 -0.113750143555852 0.108367348690193 -1.04967174089538 0.294183299374897 df.mm.trans1:probe14 -0.172181272426776 0.108367348690193 -1.58886670669611 0.112482165338600 df.mm.trans1:probe15 -0.155168664186542 0.108367348690193 -1.43187653903158 0.152566340466657 df.mm.trans1:probe16 -0.0573667888152025 0.108367348690193 -0.529373372224931 0.596692052477723 df.mm.trans1:probe17 -0.000724742572141267 0.108367348690193 -0.00668783153690696 0.994665575100472 df.mm.trans1:probe18 -0.0827811202282595 0.108367348690193 -0.763893564148358 0.445153950433132 df.mm.trans1:probe19 -0.212001936978981 0.108367348690193 -1.95632669380022 0.0507712508558353 . df.mm.trans1:probe20 -0.0171603565481846 0.108367348690193 -0.158353570107576 0.874217814313949 df.mm.trans1:probe21 -0.115397460092630 0.108367348690193 -1.06487296669530 0.287251923689183 df.mm.trans2:probe2 -0.166301688802130 0.108367348690193 -1.53461066282579 0.125271429032611 df.mm.trans2:probe3 -0.144217581376035 0.108367348690193 -1.33082135088801 0.183623682484316 df.mm.trans2:probe4 -0.127703188470419 0.108367348690193 -1.17842865045545 0.238973117185865 df.mm.trans2:probe5 -0.235610176409007 0.108367348690193 -2.17418050046221 0.0299815084302184 * df.mm.trans2:probe6 -0.218637451116892 0.108367348690193 -2.01755836752955 0.0439678418601254 * df.mm.trans3:probe2 0.073406742472489 0.108367348690193 0.677388008101485 0.498353945935636 df.mm.trans3:probe3 -0.0316291209816834 0.108367348690193 -0.291869473268250 0.770461436381476 df.mm.trans3:probe4 0.00383520271021155 0.108367348690193 0.0353907589007816 0.971776905291344 df.mm.trans3:probe5 0.148705512066505 0.108367348690193 1.37223539990476 0.170371458782962 df.mm.trans3:probe6 0.0469815621513204 0.108367348690193 0.433539832054339 0.664738497726003 df.mm.trans3:probe7 0.149486810777195 0.108367348690193 1.37944512423716 0.168139677259652 df.mm.trans3:probe8 -0.0126009502413419 0.108367348690193 -0.116279953266793 0.90745960224828 df.mm.trans3:probe9 0.0573548302733655 0.108367348690193 0.529263020334056 0.596768555863586