fitVsDatCorrelation=0.944488208202302 cont.fitVsDatCorrelation=0.237265658194868 fstatistic=7417.94352146663,56,784 cont.fstatistic=836.073936079127,56,784 residuals=-0.829500079031083,-0.0944631889181563,-0.00656446546921283,0.095427457222929,0.71780073317069 cont.residuals=-0.93314673180809,-0.350234081301616,-0.178191174290653,0.113334938288933,1.67885616560565 predictedValues: Include Exclude Both Lung 77.625744103501 51.0269809372756 70.2833496880682 cerebhem 68.691846097592 63.5221554146053 65.5550362293767 cortex 65.9376330463536 52.0608299114598 68.2242779339677 heart 65.9906258971303 46.8621884451643 63.9444336639247 kidney 74.8387837403902 49.3648126993482 74.1861574771784 liver 72.1328095154846 45.7926528072868 67.1725365340163 stomach 70.1401926609534 53.0745689439769 67.3322197354054 testicle 68.4601703566647 52.3178337074472 76.3540162698116 diffExp=26.5987631662255,5.16969068298674,13.8768031348938,19.128437451966,25.473971041042,26.3401567081977,17.0656237169764,16.1423366492174 diffExpScore=0.99336851480141 diffExp1.5=1,0,0,0,1,1,0,0 diffExp1.5Score=0.75 diffExp1.4=1,0,0,1,1,1,0,0 diffExp1.4Score=0.8 diffExp1.3=1,0,0,1,1,1,1,1 diffExp1.3Score=0.857142857142857 diffExp1.2=1,0,1,1,1,1,1,1 diffExp1.2Score=0.875 cont.predictedValues: Include Exclude Both Lung 67.1854437641173 70.8565771840912 69.0965082225059 cerebhem 72.6172100715645 70.2922958131308 64.9869936221058 cortex 62.9419486735173 72.3704932448233 59.8722442039091 heart 63.5302907439934 75.5837430266154 67.4012358758758 kidney 74.2526385762609 71.733838270997 75.1499741270282 liver 65.8144073804934 85.1248697669012 66.4018312946838 stomach 71.7972777142195 71.7521243809792 59.3842849558744 testicle 73.3680168706848 79.4056986108173 82.3248826571675 cont.diffExp=-3.67113341997396,2.32491425843368,-9.42854457130598,-12.053452282622,2.51880030526391,-19.3104623864078,0.0451533332403926,-6.03768174013246 cont.diffExpScore=1.18831329365533 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,-1,0,0 cont.diffExp1.2Score=0.5 tran.correlation=-0.174216465696148 cont.tran.correlation=-0.216921647542007 tran.covariance=-0.00095082167098511 cont.tran.covariance=-0.000974602366324995 tran.mean=61.1149892677896 cont.tran.mean=71.7891796308254 weightedLogRatios: wLogRatio Lung 1.73780692377129 cerebhem 0.327872825151747 cortex 0.961859341122746 heart 1.37549157817599 kidney 1.70903546430131 liver 1.84085873605624 stomach 1.14616603844056 testicle 1.10034423789966 cont.weightedLogRatios: wLogRatio Lung -0.225256843397458 cerebhem 0.138909958554075 cortex -0.587936245945525 heart -0.736309889626809 kidney 0.148058573528099 liver -1.11028843618555 stomach 0.00268847126594226 testicle -0.342822917615417 varWeightedLogRatios=0.253583063142682 cont.varWeightedLogRatios=0.201433893496538 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 2.64625725415531 0.0903712754124882 29.2820616072619 6.29407972979912e-128 *** df.mm.trans1 1.53173432187286 0.0780033286074593 19.6367815222488 3.93789145134222e-70 *** df.mm.trans2 1.26574655314803 0.069460540537733 18.2225266798844 3.93450902393661e-62 *** df.mm.exp2 0.166410482574493 0.0899435362356558 1.85016611019707 0.0646656892485132 . df.mm.exp3 -0.113397033304769 0.0899435362356558 -1.26075800497397 0.207771114338697 df.mm.exp4 -0.153009381071897 0.0899435362356559 -1.70117150687744 0.08930730660724 . df.mm.exp5 -0.123722181871335 0.0899435362356558 -1.37555389802751 0.169352659175188 df.mm.exp6 -0.136350558470976 0.0899435362356559 -1.51595727917270 0.129933225618579 df.mm.exp7 -0.0191637252618858 0.0899435362356558 -0.213063951718287 0.831332470667065 df.mm.exp8 -0.183509943235162 0.0899435362356559 -2.04027938988699 0.0416571045938676 * df.mm.trans1:exp2 -0.288679105008118 0.0827997365025629 -3.48647371600250 0.000516661429200556 *** df.mm.trans2:exp2 0.0526237358193992 0.0630584006428836 0.83452379513114 0.404240092827345 df.mm.trans1:exp3 -0.0497927513443859 0.0827997365025629 -0.601363644953686 0.54777164326506 df.mm.trans2:exp3 0.133455343367057 0.0630584006428836 2.11637691420132 0.0346273097023459 * df.mm.trans1:exp4 -0.00937704493292916 0.0827997365025629 -0.113249695337363 0.909861590041919 df.mm.trans2:exp4 0.0678659840169287 0.0630584006428837 1.07624017299886 0.282150926642136 df.mm.trans1:exp5 0.0871593055984702 0.0827997365025629 1.05265196823147 0.292824851956602 df.mm.trans2:exp5 0.0906055279093195 0.0630584006428837 1.43685102992768 0.151159265027743 df.mm.trans1:exp6 0.062960428866596 0.0827997365025629 0.760394072807795 0.447247676746959 df.mm.trans2:exp6 0.0281196868488676 0.0630584006428837 0.445930860316563 0.655770311481529 df.mm.trans1:exp7 -0.082239409306241 0.0827997365025629 -0.993232741793756 0.320902988939245 df.mm.trans2:exp7 0.0585070803597379 0.0630584006428837 0.927823727897554 0.353784561253909 df.mm.trans1:exp8 0.0578629386636917 0.0827997365025629 0.698829985550747 0.484865535981466 df.mm.trans2:exp8 0.208492714033872 0.0630584006428837 3.30634319786544 0.000988236601101125 *** df.mm.trans1:probe2 -0.098434679265928 0.0555437518016404 -1.77220076197699 0.0767495531561625 . df.mm.trans1:probe3 -0.0159758203562535 0.0555437518016404 -0.287625877583978 0.773709144591704 df.mm.trans1:probe4 0.169686618337334 0.0555437518016404 3.05500822024635 0.00232677085583640 ** df.mm.trans1:probe5 -0.178713703933593 0.0555437518016404 -3.21753029164866 0.00134611485818143 ** df.mm.trans1:probe6 -0.184202204259611 0.0555437518016404 -3.31634429228763 0.000954012771967243 *** df.mm.trans1:probe7 -0.235436759559442 0.0555437518016404 -4.23876227159162 2.51518498223496e-05 *** df.mm.trans1:probe8 0.0282557817136258 0.0555437518016404 0.508712155681052 0.6110971229673 df.mm.trans1:probe9 -0.180408312953892 0.0555437518016404 -3.24803973628163 0.00121149015305391 ** df.mm.trans1:probe10 -0.176464710878164 0.0555437518016404 -3.17703981373748 0.00154616568363933 ** df.mm.trans1:probe11 -0.218500801214882 0.0555437518016404 -3.93385023747043 9.10068436009582e-05 *** df.mm.trans1:probe12 -0.224926834677468 0.0555437518016404 -4.04954342084657 5.64157724098574e-05 *** df.mm.trans1:probe13 -0.331335455276254 0.0555437518016404 -5.96530562896669 3.69369786059295e-09 *** df.mm.trans1:probe14 -0.272843445526726 0.0555437518016404 -4.9122257081429 1.09640723433862e-06 *** df.mm.trans1:probe15 1.05350559574696 0.0555437518016404 18.9671306236077 2.57282513291063e-66 *** df.mm.trans1:probe16 1.05141499437290 0.0555437518016404 18.9294918018455 4.20186387429354e-66 *** df.mm.trans1:probe17 1.42331521821495 0.0555437518016404 25.625118434526 1.10143984005497e-105 *** df.mm.trans1:probe18 1.24690203282828 0.0555437518016404 22.4490062767322 1.40600589546328e-86 *** df.mm.trans1:probe19 0.945136287778004 0.0555437518016404 17.0160685427464 1.68972702380832e-55 *** df.mm.trans1:probe20 1.24234515047457 0.0555437518016404 22.3669649632468 4.32158238358801e-86 *** df.mm.trans2:probe2 0.0476328229225647 0.0555437518016404 0.857573019062028 0.391390351818455 df.mm.trans2:probe3 0.0740421895733508 0.0555437518016404 1.33304264065151 0.182905042302598 df.mm.trans2:probe4 0.0165524038041114 0.0555437518016404 0.29800658520915 0.76577709310728 df.mm.trans2:probe5 0.0267756865467053 0.0555437518016404 0.482064780973519 0.629894473495138 df.mm.trans2:probe6 0.140257749886154 0.0555437518016404 2.52517601596389 0.0117601420090288 * df.mm.trans3:probe2 -1.40882190217202 0.0555437518016404 -25.3641833055003 4.20671617608628e-104 *** df.mm.trans3:probe3 -1.43014251527248 0.0555437518016404 -25.7480358975362 1.97813682051276e-106 *** df.mm.trans3:probe4 -1.36317415575428 0.0555437518016404 -24.5423492568973 3.94007769517336e-99 *** df.mm.trans3:probe5 -1.01623969064540 0.0555437518016404 -18.2962017811586 1.52670189048844e-62 *** df.mm.trans3:probe6 -1.36690089508025 0.0555437518016404 -24.6094448203962 1.55001475836489e-99 *** df.mm.trans3:probe7 -1.43113037028692 0.0555437518016404 -25.7658210665678 1.54288896635396e-106 *** df.mm.trans3:probe8 -1.19266340714880 0.0555437518016404 -21.4725035393374 8.42519096257291e-81 *** df.mm.trans3:probe9 -1.5117559082309 0.0555437518016404 -27.2173891607058 2.3163155395544e-115 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.31208623516023 0.267210341178102 16.1374227365180 8.47245443803564e-51 *** df.mm.trans1 -0.157211058484869 0.230640720240920 -0.681627504113979 0.495675817936917 df.mm.trans2 -0.0164801680689453 0.20538135210315 -0.0802417936204275 0.93606542864627 df.mm.exp2 0.131066787483992 0.265945599357707 0.4928330748865 0.622268534871076 df.mm.exp3 0.0991882770717178 0.265945599357707 0.372964536022670 0.709275650521422 df.mm.exp4 0.0334844677943703 0.265945599357707 0.125907207621557 0.899837657175525 df.mm.exp5 0.0283399097057595 0.265945599357707 0.106562807484704 0.915163086598438 df.mm.exp6 0.202623159736683 0.265945599357707 0.761897020390802 0.446350601625865 df.mm.exp7 0.230424183956834 0.265945599357707 0.866433528185233 0.386517542516944 df.mm.exp8 0.0267746263966264 0.265945599357707 0.100677080054307 0.91983254608672 df.mm.trans1:exp2 -0.0533214538312171 0.244822768510461 -0.217796139450725 0.827644624715513 df.mm.trans2:exp2 -0.139062379161909 0.186451465612512 -0.745836878809589 0.455989517197224 df.mm.trans1:exp3 -0.164432038515185 0.244822768510461 -0.671637035703885 0.50201264575855 df.mm.trans2:exp3 -0.0780474069676747 0.186451465612512 -0.418593689844599 0.675627744963272 df.mm.trans1:exp4 -0.0894242694555644 0.244822768510462 -0.365261245919385 0.715014920548366 df.mm.trans2:exp4 0.0310989585876482 0.186451465612512 0.166793854290633 0.867575262528205 df.mm.trans1:exp5 0.0716767903136546 0.244822768510461 0.292770115907712 0.769775339427184 df.mm.trans2:exp5 -0.0160351253659019 0.186451465612512 -0.0860016053680508 0.93148709917532 df.mm.trans1:exp6 -0.223241001635285 0.244822768510462 -0.91184738655443 0.362129349613036 df.mm.trans2:exp6 -0.0191617195211331 0.186451465612512 -0.102770549205311 0.918171360215862 df.mm.trans1:exp7 -0.164034236877791 0.244822768510461 -0.67001218014076 0.503047316703271 df.mm.trans2:exp7 -0.217864516006857 0.186451465612512 -1.16847843105523 0.242969015460526 df.mm.trans1:exp8 0.0612568633934698 0.244822768510462 0.250209013508694 0.802491264968777 df.mm.trans2:exp8 0.087137715849436 0.186451465612512 0.467347980146897 0.64038079773512 df.mm.trans1:probe2 -0.0500061921847594 0.164232105848726 -0.304484874783375 0.76083931744879 df.mm.trans1:probe3 0.367805759556298 0.164232105848726 2.23954845890537 0.0253998596886088 * df.mm.trans1:probe4 0.122060994041436 0.164232105848726 0.74322248631377 0.457569641811072 df.mm.trans1:probe5 0.0816080482561126 0.164232105848726 0.496906788318732 0.619394091461186 df.mm.trans1:probe6 0.0582805133183005 0.164232105848726 0.354866747991301 0.722784857987777 df.mm.trans1:probe7 0.0899014653631381 0.164232105848726 0.547404935828724 0.584256355721509 df.mm.trans1:probe8 0.268241010456372 0.164232105848726 1.63330433516725 0.102806504731529 df.mm.trans1:probe9 -0.0606010743504062 0.164232105848726 -0.368996512814771 0.712229952016155 df.mm.trans1:probe10 0.133757583419371 0.164232105848726 0.814442357224447 0.415638892695615 df.mm.trans1:probe11 0.0288153311381640 0.164232105848726 0.175454920883166 0.860767493728831 df.mm.trans1:probe12 0.0388036269709303 0.164232105848726 0.236273089055268 0.813282480516752 df.mm.trans1:probe13 -0.125788852109991 0.164232105848726 -0.765921203165082 0.443953718284916 df.mm.trans1:probe14 -0.0300340340314697 0.164232105848726 -0.182875533844363 0.85494295983874 df.mm.trans1:probe15 0.260829347245095 0.164232105848726 1.58817513723744 0.112649921902215 df.mm.trans1:probe16 -0.0287892296962048 0.164232105848726 -0.175295990679938 0.86089232429064 df.mm.trans1:probe17 0.0252363888889574 0.164232105848726 0.153662944029973 0.877915047180227 df.mm.trans1:probe18 -0.0329441064722463 0.164232105848726 -0.20059480027974 0.841067448658658 df.mm.trans1:probe19 0.114025553035083 0.164232105848726 0.694295140684077 0.487702816979853 df.mm.trans1:probe20 0.263659532536175 0.164232105848726 1.60540797533846 0.108806745660409 df.mm.trans2:probe2 -0.0698413808251287 0.164232105848726 -0.425260216108167 0.670763689354662 df.mm.trans2:probe3 -0.0133121112845226 0.164232105848726 -0.0810566923910993 0.935417553919168 df.mm.trans2:probe4 -0.0880568161724281 0.164232105848726 -0.536172971279667 0.591991099930983 df.mm.trans2:probe5 -0.190019154949133 0.164232105848726 -1.15701588290026 0.247618270389120 df.mm.trans2:probe6 -0.162994627907313 0.164232105848726 -0.9924650668332 0.321276916852646 df.mm.trans3:probe2 0.232126257029658 0.164232105848726 1.41340364498200 0.157933984079325 df.mm.trans3:probe3 0.206996655514288 0.164232105848726 1.26039092322759 0.207903370684627 df.mm.trans3:probe4 0.078219910394458 0.164232105848726 0.476276608585329 0.634010027297976 df.mm.trans3:probe5 0.164964140679682 0.164232105848726 1.00445731866600 0.31546814355862 df.mm.trans3:probe6 -0.0315904239442046 0.164232105848726 -0.192352303959997 0.847516062657417 df.mm.trans3:probe7 -0.0078547486931035 0.164232105848726 -0.0478271203581747 0.961866202841664 df.mm.trans3:probe8 0.121003983864646 0.164232105848726 0.736786411154603 0.461472663588226 df.mm.trans3:probe9 0.110116923046082 0.164232105848726 0.670495713837528 0.502739295537462