fitVsDatCorrelation=0.890074280040119 cont.fitVsDatCorrelation=0.250771158422883 fstatistic=8713.31239645246,52,692 cont.fstatistic=1921.47375838816,52,692 residuals=-0.759078284241315,-0.0919035241520207,-4.6061845070593e-05,0.0902153108214074,0.88361794573636 cont.residuals=-0.937070310523839,-0.264767538062233,-0.0831834345209987,0.192656782922863,1.22209141630331 predictedValues: Include Exclude Both Lung 83.9142679910488 51.0272467508133 76.1276849162062 cerebhem 65.9953262393905 48.3002565767807 64.201523466603 cortex 79.2631412431831 50.507244228946 72.5675382561424 heart 99.1464941162716 52.6622512025097 84.0005682191172 kidney 67.261800210865 52.179329021727 67.12751473747 liver 70.6912346058415 52.9670897837072 71.2196558645281 stomach 74.5326051113021 53.7448811640094 68.0133093405108 testicle 72.8931979364728 49.6259109778384 70.2008066782953 diffExp=32.8870212402355,17.6950696626099,28.7558970142371,46.4842429137619,15.0824711891381,17.7241448221343,20.7877239472927,23.2672869586344 diffExpScore=0.995090430773179 diffExp1.5=1,0,1,1,0,0,0,0 diffExp1.5Score=0.75 diffExp1.4=1,0,1,1,0,0,0,1 diffExp1.4Score=0.8 diffExp1.3=1,1,1,1,0,1,1,1 diffExp1.3Score=0.875 diffExp1.2=1,1,1,1,1,1,1,1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 68.1523174389988 69.0122523407847 61.8831744097649 cerebhem 72.1331907449518 64.907655491633 81.0003087329125 cortex 66.2944966155284 68.0471036945773 99.7437858038317 heart 73.3591018172798 64.6209371724597 65.9613754437022 kidney 73.8989035057794 69.2140629245453 62.9001897565252 liver 73.5175268725472 64.6327270517297 81.0959619030235 stomach 71.2603961987299 71.5408468007124 66.5857581230351 testicle 72.1929936040194 70.4174414212297 69.8772479000508 cont.diffExp=-0.85993490178592,7.22553525331882,-1.75260707904897,8.73816464482007,4.68484058123407,8.8847998208175,-0.280450601982494,1.77555218278971 cont.diffExpScore=1.16270062047662 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.296111192794447 cont.tran.correlation=-0.288288461341728 tran.covariance=0.00148085342138941 cont.tran.covariance=-0.000460428331321683 tran.mean=64.0445173225442 cont.tran.mean=69.5751221059691 weightedLogRatios: wLogRatio Lung 2.07981822534569 cerebhem 1.25904838091179 cortex 1.86907281032972 heart 2.70811160560733 kidney 1.03635295002431 liver 1.18750833724077 stomach 1.35626309546899 testicle 1.57512920262669 cont.weightedLogRatios: wLogRatio Lung -0.0530146373983485 cerebhem 0.446021383633755 cortex -0.109778436322304 heart 0.53673058786733 kidney 0.279655860309064 liver 0.545238629096812 stomach -0.0167652622775239 testicle 0.106254228618882 varWeightedLogRatios=0.312208267699654 cont.varWeightedLogRatios=0.0732781897927205 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.01700967225346 0.0921430946693626 43.595341427024 1.19076035493299e-200 *** df.mm.trans1 0.354854104979672 0.0827579739289978 4.28785394485514 2.0604227466588e-05 *** df.mm.trans2 -0.0679189998052685 0.0761071965912535 -0.892412319035202 0.372482185122135 df.mm.exp2 -0.124749546005379 0.104248011328352 -1.19666115847959 0.231848464495626 df.mm.exp3 -0.0193710985330671 0.104248011328353 -0.185817439452667 0.852642381341374 df.mm.exp4 0.0999304311930493 0.104248011328352 0.9585835731513 0.338103357080943 df.mm.exp5 -0.0730585273487107 0.104248011328353 -0.700814590300399 0.483654305138005 df.mm.exp6 -0.0675198908627401 0.104248011328353 -0.647685169264966 0.517403414662263 df.mm.exp7 0.0460382954999628 0.104248011328352 0.441622769713609 0.658900166990826 df.mm.exp8 -0.0875947814822808 0.104248011328353 -0.840253740729705 0.401056348168880 df.mm.trans1:exp2 -0.115462187533105 0.0998098719754545 -1.15682131684829 0.247744548302253 df.mm.trans2:exp2 0.0698266787189231 0.0868733427736271 0.803775663391658 0.421802561479686 df.mm.trans1:exp3 -0.0376513408556712 0.0998098719754545 -0.377230629700942 0.706117877032046 df.mm.trans2:exp3 0.00912813452499942 0.0868733427736271 0.105074056477662 0.916347493445222 df.mm.trans1:exp4 0.0668724052527293 0.0998098719754545 0.669997906311058 0.503082632767618 df.mm.trans2:exp4 -0.0683912683553605 0.0868733427736271 -0.787252638977795 0.431403532263096 df.mm.trans1:exp5 -0.148144660245214 0.0998098719754546 -1.48426861304507 0.138193011273175 df.mm.trans2:exp5 0.0953852079783815 0.0868733427736271 1.09798017358368 0.272595036508087 df.mm.trans1:exp6 -0.103954182539050 0.0998098719754545 -1.04152205069069 0.297997059424735 df.mm.trans2:exp6 0.104830923990368 0.0868733427736271 1.20670991403582 0.227956227722932 df.mm.trans1:exp7 -0.164597271858422 0.0998098719754545 -1.64910813530450 0.099579334113393 . df.mm.trans2:exp7 0.00585039273524216 0.0868733427736271 0.0673439348418651 0.946327353742839 df.mm.trans1:exp8 -0.053205549129125 0.0998098719754545 -0.533069004859654 0.594156961980499 df.mm.trans2:exp8 0.0597481374776398 0.0868733427736271 0.687761464795137 0.491833462376004 df.mm.trans1:probe2 -0.191878147523114 0.0499049359877273 -3.84487313179404 0.000131734021208679 *** df.mm.trans1:probe3 0.110418692293976 0.0499049359877273 2.21258058163085 0.0272522912639870 * df.mm.trans1:probe4 -0.149248150093721 0.0499049359877273 -2.99064906386062 0.00288269928407011 ** df.mm.trans1:probe5 -0.302852216295911 0.0499049359877273 -6.0685824017566 2.12523068590658e-09 *** df.mm.trans1:probe6 0.288857578242816 0.0499049359877273 5.78815647241492 1.07899042110758e-08 *** df.mm.trans1:probe7 -0.0198688633567202 0.0499049359877273 -0.398134231884525 0.690654041030392 df.mm.trans1:probe8 -0.321681358534605 0.0499049359877273 -6.44588259994389 2.15500183763786e-10 *** df.mm.trans1:probe9 0.0961056305727215 0.0499049359877273 1.92577404760836 0.0545419976029262 . df.mm.trans1:probe10 0.465511909000113 0.0499049359877273 9.32797327131314 1.43048231474829e-19 *** df.mm.trans1:probe11 -0.255061847895844 0.0499049359877273 -5.11095431439026 4.15185312288002e-07 *** df.mm.trans1:probe12 -0.184217691977952 0.0499049359877273 -3.69137217254932 0.000240596592001685 *** df.mm.trans1:probe13 -0.203896863601347 0.0499049359877273 -4.08570534288412 4.90898681322253e-05 *** df.mm.trans1:probe14 -0.28357229271352 0.0499049359877273 -5.6822494028097 1.95914788285885e-08 *** df.mm.trans1:probe15 -0.127226083193605 0.0499049359877273 -2.54936872827355 0.0110064152165212 * df.mm.trans1:probe16 -0.159137397204422 0.0499049359877273 -3.18881076700624 0.00149299093348774 ** df.mm.trans1:probe17 0.426648897402345 0.0499049359877273 8.54923243478895 7.91080779403455e-17 *** df.mm.trans1:probe18 0.509814440845125 0.0499049359877273 10.2157117478419 6.48126674351726e-23 *** df.mm.trans1:probe19 0.19549068894721 0.0499049359877273 3.91726159102349 9.84429464558452e-05 *** df.mm.trans1:probe20 0.397572310802675 0.0499049359877273 7.96659294183739 6.71762334670571e-15 *** df.mm.trans1:probe21 0.590928987945655 0.0499049359877273 11.8410929951093 1.3844160711465e-29 *** df.mm.trans1:probe22 0.565588808078655 0.0499049359877273 11.3333239865841 1.98070795943335e-27 *** df.mm.trans2:probe2 0.0372652858722526 0.0499049359877273 0.746725451795329 0.455482923568275 df.mm.trans2:probe3 -0.127916458603063 0.0499049359877273 -2.56320253841265 0.0105814129528846 * df.mm.trans2:probe4 -0.103408660412902 0.0499049359877273 -2.07211287553465 0.0386247446190183 * df.mm.trans2:probe5 0.0473892027111288 0.0499049359877273 0.94958948996113 0.342652392760355 df.mm.trans2:probe6 -0.00390776088523574 0.0499049359877273 -0.0783040957350741 0.937608795708017 df.mm.trans3:probe2 0.197185928435544 0.0499049359877273 3.95123096609193 8.57276366895746e-05 *** df.mm.trans3:probe3 -0.111784274989174 0.0499049359877273 -2.23994426155891 0.0254112561299433 * cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.31492030286215 0.195690557892140 22.0497112857148 5.12014162743458e-82 *** df.mm.trans1 -0.0420985480332133 0.175758738582649 -0.239524636855634 0.810769721957048 df.mm.trans2 -0.0778220496646084 0.161634030352371 -0.481470699548554 0.630334213734899 df.mm.exp2 -0.273754007284482 0.221398592799538 -1.23647582318804 0.216701242908896 df.mm.exp3 -0.5190786006168 0.221398592799538 -2.3445433597981 0.0193321887252002 * df.mm.exp4 -0.0559452003667448 0.221398592799538 -0.252689954616828 0.800582851545365 df.mm.exp5 0.067571975542352 0.221398592799538 0.305205081423142 0.760301739507873 df.mm.exp6 -0.260169334141336 0.221398592799538 -1.17511737925499 0.240351933185242 df.mm.exp7 0.00733768019618968 0.221398592799538 0.0331423976250539 0.973570589801172 df.mm.exp8 -0.043737019320657 0.221398592799538 -0.197548768344061 0.843456133867501 df.mm.trans1:exp2 0.330523126314486 0.211973014365385 1.55926983113404 0.119389721770731 df.mm.trans2:exp2 0.212435523316765 0.184498827332948 1.15141936882559 0.249957415800787 df.mm.trans1:exp3 0.491440324517366 0.211973014365385 2.31840985037018 0.0207176124018049 * df.mm.trans2:exp3 0.504994708387033 0.184498827332948 2.73711608733271 0.00635718186609092 ** df.mm.trans1:exp4 0.129566622207308 0.211973014365385 0.611241117626275 0.541240696839982 df.mm.trans2:exp4 -0.00980039550833271 0.184498827332948 -0.0531190124620512 0.95765241357953 df.mm.trans1:exp5 0.0133808522228404 0.211973014365385 0.0631252627269593 0.949684986554772 df.mm.trans2:exp5 -0.0646519711022876 0.184498827332948 -0.350419414783684 0.726130595859215 df.mm.trans1:exp6 0.335948010245151 0.211973014365385 1.58486216394539 0.113454506066640 df.mm.trans2:exp6 0.194606168364058 0.184498827332948 1.05478268440628 0.291892849935211 df.mm.trans1:exp7 0.037257877330946 0.211973014365385 0.175767077910792 0.86052835548658 df.mm.trans2:exp7 0.0286468313194349 0.184498827332948 0.155268365298271 0.876655032028182 df.mm.trans1:exp8 0.101334856476342 0.211973014365385 0.47805545804839 0.632761713337555 df.mm.trans2:exp8 0.063893940271123 0.184498827332948 0.346310820479197 0.729214407022237 df.mm.trans1:probe2 -0.00803321135699543 0.105986507182692 -0.0757946607594901 0.939604370555823 df.mm.trans1:probe3 -0.156109419157352 0.105986507182692 -1.47291785819737 0.141227870298927 df.mm.trans1:probe4 -0.205682109562228 0.105986507182692 -1.94064428604753 0.0527072255554635 . df.mm.trans1:probe5 -0.0744382519312115 0.105986507182692 -0.702337060725097 0.482705157319155 df.mm.trans1:probe6 -0.075550591267986 0.105986507182692 -0.712832163982505 0.476189912547875 df.mm.trans1:probe7 -0.111650256567887 0.105986507182692 -1.05343840018647 0.292507795159109 df.mm.trans1:probe8 0.0735336715145176 0.105986507182692 0.693802196800063 0.488039087890444 df.mm.trans1:probe9 -0.0289432657369055 0.105986507182692 -0.273084437880523 0.784869785215144 df.mm.trans1:probe10 -0.137478200101128 0.105986507182692 -1.29712926442752 0.195019007752480 df.mm.trans1:probe11 -0.0974735333061243 0.105986507182692 -0.919678701536094 0.358061153362743 df.mm.trans1:probe12 0.00485129622909766 0.105986507182692 0.0457727720070568 0.96350456639709 df.mm.trans1:probe13 -0.00381778575713635 0.105986507182692 -0.0360214319597825 0.971275657947024 df.mm.trans1:probe14 0.0228191533116656 0.105986507182692 0.215302437246390 0.829594968324708 df.mm.trans1:probe15 -0.157990608218597 0.105986507182692 -1.49066718413753 0.136504558710996 df.mm.trans1:probe16 -0.0186503517115809 0.105986507182692 -0.175969113496991 0.860369689000158 df.mm.trans1:probe17 -0.0535309153383292 0.105986507182692 -0.505072926368413 0.613668426547066 df.mm.trans1:probe18 -0.0487080339537187 0.105986507182692 -0.459568253058468 0.645970490256676 df.mm.trans1:probe19 -0.00893701305889464 0.105986507182692 -0.084322177383293 0.932824667835654 df.mm.trans1:probe20 0.0492761984706307 0.105986507182692 0.464928978041439 0.642128575437469 df.mm.trans1:probe21 -0.144654056815562 0.105986507182692 -1.36483464415161 0.172748623339107 df.mm.trans1:probe22 -0.0957475229405668 0.105986507182692 -0.903393511926227 0.366631445326020 df.mm.trans2:probe2 -6.28857871573467e-07 0.105986507182692 -5.93337669378503e-06 0.999995268769963 df.mm.trans2:probe3 -0.0111908567569443 0.105986507182692 -0.105587560666135 0.915940193333096 df.mm.trans2:probe4 0.027877521238984 0.105986507182692 0.263028964535369 0.792606547662658 df.mm.trans2:probe5 0.0412370169358433 0.105986507182692 0.389077987679712 0.697338149446295 df.mm.trans2:probe6 -0.083250800429315 0.105986507182692 -0.785484894655627 0.432438173988105 df.mm.trans3:probe2 -0.0453483323505557 0.105986507182692 -0.427868919884182 0.668879678459662 df.mm.trans3:probe3 -0.163905811634907 0.105986507182692 -1.54647809416322 0.122446324905823