fitVsDatCorrelation=0.901521530731239 cont.fitVsDatCorrelation=0.31608845238705 fstatistic=4381.0029894722,43,485 cont.fstatistic=902.513753325028,43,485 residuals=-0.82735081032727,-0.117800222803840,-0.0044904910260712,0.111929026287433,0.752627821047565 cont.residuals=-0.886769533361906,-0.392612490726435,-0.0913702197433787,0.324173717701208,1.57785588388699 predictedValues: Include Exclude Both Lung 114.655105593267 55.706233085767 71.2679607678131 cerebhem 94.9147396593623 56.4248139980277 87.0017396463881 cortex 190.483002409619 56.5475943836435 177.031371039979 heart 135.579699264318 77.3297043208716 70.3784466331679 kidney 100.897323034313 56.7193942441309 65.2346851220882 liver 112.015843934465 63.4999579091885 64.2510801738678 stomach 199.881826487997 57.9028658920073 62.3501916195598 testicle 129.83576614512 71.6997008948663 61.3232156689169 diffExp=58.9488725075005,38.4899256613347,133.935408025975,58.2499949434465,44.1779287901817,48.515886025277,141.97896059599,58.1360652502536 diffExpScore=0.998286007256437 diffExp1.5=1,1,1,1,1,1,1,1 diffExp1.5Score=0.888888888888889 diffExp1.4=1,1,1,1,1,1,1,1 diffExp1.4Score=0.888888888888889 diffExp1.3=1,1,1,1,1,1,1,1 diffExp1.3Score=0.888888888888889 diffExp1.2=1,1,1,1,1,1,1,1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 58.4760764564507 79.5327241572947 90.4837022234114 cerebhem 66.3423990444272 84.967150943901 70.9417634389614 cortex 76.4454200215653 83.537866495113 86.6602142232325 heart 88.8481700237542 88.158638718729 89.167461381301 kidney 58.3666603028361 90.422499393844 79.0618923973574 liver 84.537963478979 71.900182129357 76.9554974330804 stomach 64.6275509592063 78.0856592819483 78.8118170523304 testicle 87.3146290465138 77.2823889249008 73.380702811895 cont.diffExp=-21.0566477008440,-18.6247518994738,-7.09244647354767,0.689531305025184,-32.0558390910078,12.6377813496221,-13.458108322742,10.0322401216130 cont.diffExpScore=1.65380031139689 cont.diffExp1.5=0,0,0,0,-1,0,0,0 cont.diffExp1.5Score=0.5 cont.diffExp1.4=0,0,0,0,-1,0,0,0 cont.diffExp1.4Score=0.5 cont.diffExp1.3=-1,0,0,0,-1,0,0,0 cont.diffExp1.3Score=0.666666666666667 cont.diffExp1.2=-1,-1,0,0,-1,0,-1,0 cont.diffExp1.2Score=0.8 tran.correlation=-0.0490618239892546 cont.tran.correlation=-0.282420579644086 tran.covariance=0.00095546231736202 cont.tran.covariance=-0.00398449446651511 tran.mean=98.3808482035603 cont.tran.mean=77.4278737111763 weightedLogRatios: wLogRatio Lung 3.16237311449413 cerebhem 2.23263133191525 cortex 5.63800961386899 heart 2.59899617635180 kidney 2.49178384300423 liver 2.51721985963914 stomach 5.79615780826219 testicle 2.71322261558415 cont.weightedLogRatios: wLogRatio Lung -1.29860055934969 cerebhem -1.06856194087699 cortex -0.388689997880538 heart 0.0349275550544641 kidney -1.87602234666208 liver 0.705370650522084 stomach -0.8064553154218 testicle 0.53806491562953 varWeightedLogRatios=2.12665649902765 cont.varWeightedLogRatios=0.824887684443615 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.40364724272845 0.117360468951955 37.5224066677105 1.62181698830181e-145 *** df.mm.trans1 0.341740249943285 0.0939531928255918 3.63734578533875 0.000304968876034264 *** df.mm.trans2 -0.322352380920485 0.0939531928255918 -3.43098910453078 0.000652766634929486 *** df.mm.exp2 -0.375613794019839 0.125809725926097 -2.98557040208865 0.00297355675507455 ** df.mm.exp3 -0.387255045209686 0.125809725926097 -3.07810101611037 0.00220121435214967 ** df.mm.exp4 0.508177031121828 0.125809725926097 4.03925076047254 6.23259430465428e-05 *** df.mm.exp5 -0.0213454265822923 0.125809725926097 -0.169664359612635 0.865344848387725 df.mm.exp6 0.211307315124446 0.125809725926097 1.67957853471974 0.0936833541609828 . df.mm.exp7 0.728152742333562 0.125809725926097 5.78773013750379 1.28197074380023e-08 *** df.mm.exp8 0.52702467975227 0.125809725926097 4.18906150436934 3.32822331494044e-05 *** df.mm.trans1:exp2 0.186664265068911 0.098693268845681 1.89135760981616 0.0591722104544053 . df.mm.trans2:exp2 0.388430775007633 0.0986932688456811 3.93573725493874 9.5071579099685e-05 *** df.mm.trans1:exp3 0.894889469291572 0.0986932688456811 9.06738098512919 3.02855101150203e-18 *** df.mm.trans2:exp3 0.402245661967776 0.0986932688456811 4.07571526075133 5.35943729569533e-05 *** df.mm.trans1:exp4 -0.34054591757114 0.098693268845681 -3.45054856885554 0.000608303412558892 *** df.mm.trans2:exp4 -0.180190921374262 0.098693268845681 -1.82576708099529 0.0685000873721204 . df.mm.trans1:exp5 -0.106479717596806 0.0986932688456811 -1.07889543878924 0.281170609526537 df.mm.trans2:exp5 0.039369583726965 0.0986932688456811 0.398908498902028 0.69013620100975 df.mm.trans1:exp6 -0.234595530441561 0.0986932688456811 -2.37701651982345 0.0178402742108593 * df.mm.trans2:exp6 -0.0803601173376985 0.098693268845681 -0.814241115707205 0.415906433489447 df.mm.trans1:exp7 -0.172354958284317 0.0986932688456811 -1.74636994295745 0.0813797807905565 . df.mm.trans2:exp7 -0.689477906972531 0.0986932688456811 -6.98606819934816 9.3735701376786e-12 *** df.mm.trans1:exp8 -0.402682905633033 0.0986932688456811 -4.08014558989506 5.26164363249978e-05 *** df.mm.trans2:exp8 -0.274630149039366 0.0986932688456811 -2.78266342022558 0.00560175057225264 ** df.mm.trans1:probe2 0.160328152041433 0.0675706620258767 2.37274798314146 0.0180453091202778 * df.mm.trans1:probe3 0.0272490588180769 0.0675706620258767 0.403267601664783 0.68692909020069 df.mm.trans1:probe4 -0.0296426779744683 0.0675706620258767 -0.43869154283432 0.661080407091167 df.mm.trans1:probe5 -0.302467027822643 0.0675706620258767 -4.47630700594306 9.4756930853091e-06 *** df.mm.trans1:probe6 0.0891892571138304 0.0675706620258767 1.31994055466964 0.187477514089208 df.mm.trans2:probe2 -0.140308224603755 0.0675706620258767 -2.07646662615237 0.0383768554174271 * df.mm.trans2:probe3 -0.237545126137396 0.0675706620258767 -3.51550686370997 0.00048010304118015 *** df.mm.trans2:probe4 -0.320454414527738 0.0675706620258767 -4.74250813770357 2.77973631894153e-06 *** df.mm.trans2:probe5 -0.17726166163544 0.0675706620258767 -2.62335244795376 0.00898112901963289 ** df.mm.trans2:probe6 -0.103675637795061 0.0675706620258767 -1.53432917018569 0.125600741427489 df.mm.trans3:probe2 -0.358839283919359 0.0675706620258767 -5.31057818823706 1.66751808977675e-07 *** df.mm.trans3:probe3 0.496621241274198 0.0675706620258767 7.34965777135664 8.49949915007454e-13 *** df.mm.trans3:probe4 -0.115971240975661 0.0675706620258767 -1.71629576355562 0.0867464646334388 . df.mm.trans3:probe5 -0.510998538224967 0.0675706620258767 -7.56243202159652 1.99782946198196e-13 *** df.mm.trans3:probe6 -0.129769427632667 0.0675706620258767 -1.92049957395668 0.0553808684287245 . df.mm.trans3:probe7 0.0095898961416615 0.0675706620258767 0.141923963065346 0.887199000290477 df.mm.trans3:probe8 -0.0611995564217839 0.0675706620258767 -0.905711955261694 0.365538048102811 df.mm.trans3:probe9 -0.531933028581961 0.0675706620258767 -7.87224828991985 2.29503341838272e-14 *** df.mm.trans3:probe10 -0.363382495837381 0.0675706620258767 -5.37781464532967 1.17453036590342e-07 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.81629715094588 0.257301948777424 14.8319791944021 2.61911562640007e-41 *** df.mm.trans1 0.200588839755515 0.205983665741677 0.973809447624224 0.330636592260708 df.mm.trans2 0.533914566659318 0.205983665741677 2.59202381284396 0.00982910112457604 ** df.mm.exp2 0.435618076670021 0.275826161441043 1.57932109990638 0.114914366697026 df.mm.exp3 0.360265619980952 0.275826161441042 1.30613288492563 0.192126479834178 df.mm.exp4 0.535934137924193 0.275826161441042 1.94301416197879 0.0525927117441409 . df.mm.exp5 0.261390437163418 0.275826161441042 0.94766368714916 0.343772620727005 df.mm.exp6 0.429635669709475 0.275826161441042 1.55763205152427 0.119972761570754 df.mm.exp7 0.219767742968857 0.275826161441043 0.796761778580718 0.425979249015889 df.mm.exp8 0.581706592203111 0.275826161441043 2.10896090916108 0.0354599839405242 * df.mm.trans1:exp2 -0.309406602073326 0.216375843007272 -1.42994983993165 0.153375276525761 df.mm.trans2:exp2 -0.369521915944106 0.216375843007272 -1.70777805326303 0.0883174600188532 . df.mm.trans1:exp3 -0.0923063186880417 0.216375843007272 -0.426601774972353 0.669858693780753 df.mm.trans2:exp3 -0.311134161546826 0.216375843007272 -1.43793390806740 0.151097710562310 df.mm.trans1:exp4 -0.117622900912053 0.216375843007272 -0.543604587634581 0.586963376589577 df.mm.trans2:exp4 -0.432964795255726 0.216375843007272 -2.00098490311219 0.0459507841215235 * df.mm.trans1:exp5 -0.263263316704455 0.216375843007272 -1.21669458589056 0.224312189672076 df.mm.trans2:exp5 -0.133065875218672 0.216375843007272 -0.614975652407742 0.538859221250081 df.mm.trans1:exp6 -0.0610526854309802 0.216375843007272 -0.282160358487561 0.77794091691937 df.mm.trans2:exp6 -0.530525433479269 0.216375843007272 -2.45186997820934 0.0145631390745440 * df.mm.trans1:exp7 -0.119744658795529 0.216375843007272 -0.553410478412343 0.580237380694341 df.mm.trans2:exp7 -0.238129884519041 0.216375843007272 -1.10053821724932 0.271643604962326 df.mm.trans1:exp8 -0.180806292403973 0.216375843007272 -0.835612191689513 0.403784566511317 df.mm.trans2:exp8 -0.610409051773509 0.216375843007272 -2.82105915008725 0.00498282062295722 ** df.mm.trans1:probe2 0.262592661656342 0.148142412642849 1.77256909059134 0.0769277918231172 . df.mm.trans1:probe3 0.123382400004074 0.148142412642849 0.832863444053204 0.405331685659301 df.mm.trans1:probe4 0.163556966504780 0.148142412642849 1.10405226691625 0.270117919651292 df.mm.trans1:probe5 0.229850514671364 0.148142412642849 1.55155104180395 0.12142195055116 df.mm.trans1:probe6 0.0483251440658126 0.148142412642849 0.326207351451186 0.744408188031508 df.mm.trans2:probe2 0.225844910096453 0.148142412642849 1.52451216412233 0.128032601980442 df.mm.trans2:probe3 0.0519964876605714 0.148142412642849 0.350989880163 0.725748350228436 df.mm.trans2:probe4 0.162681971051063 0.148142412642849 1.09814581893753 0.272685686713158 df.mm.trans2:probe5 0.176956112486246 0.148142412642849 1.1945000039446 0.232866274801447 df.mm.trans2:probe6 -0.202169977598734 0.148142412642849 -1.36470018269607 0.172980101389396 df.mm.trans3:probe2 -0.0998723171650941 0.148142412642849 -0.674164240904273 0.500528088787138 df.mm.trans3:probe3 -0.00325466948852825 0.148142412642849 -0.0219698696036145 0.982481025935239 df.mm.trans3:probe4 0.0959091789360346 0.148142412642849 0.647412022155047 0.517671632526004 df.mm.trans3:probe5 -0.176938371234206 0.148142412642849 -1.19438024585694 0.232913052279015 df.mm.trans3:probe6 -0.238984194173504 0.148142412642849 -1.61320576538511 0.107350244973171 df.mm.trans3:probe7 -0.103793152535236 0.148142412642849 -0.700630904300629 0.483869362022473 df.mm.trans3:probe8 -0.121786512531224 0.148142412642849 -0.82209078655168 0.411429191092111 df.mm.trans3:probe9 0.0906449483133493 0.148142412642849 0.611877089729068 0.540905802055083 df.mm.trans3:probe10 0.101767001864365 0.148142412642849 0.686953857770027 0.492440132027744