fitVsDatCorrelation=0.96658639548836 cont.fitVsDatCorrelation=0.246173653200695 fstatistic=8709.90655173744,53,715 cont.fstatistic=596.709323152465,53,715 residuals=-0.791583968147958,-0.0936799927808022,-0.00090846746671128,0.0931468034528657,1.14628413642014 cont.residuals=-1.13816688904703,-0.529232912449588,-0.250949655982114,0.491289597687572,1.92774760439055 predictedValues: Include Exclude Both Lung 71.3716064605732 317.302925881527 56.0595888086648 cerebhem 71.2562215001724 169.76192565441 61.0702871371727 cortex 62.181691823556 193.965727890183 55.0127919096784 heart 65.4164492015326 245.856215124515 54.2244069687952 kidney 70.0154691017247 355.994684287365 58.3840160431668 liver 72.9371495569842 348.710513160191 56.8816073730852 stomach 74.6050135469571 250.790680649588 53.834902444924 testicle 74.0729783169289 384.217547124926 56.6517682207333 diffExp=-245.931319420954,-98.5057041542376,-131.784036066627,-180.439765922983,-285.979215185640,-275.773363603207,-176.185667102631,-310.144568807998 diffExpScore=0.999413745432552 diffExp1.5=-1,-1,-1,-1,-1,-1,-1,-1 diffExp1.5Score=0.888888888888889 diffExp1.4=-1,-1,-1,-1,-1,-1,-1,-1 diffExp1.4Score=0.888888888888889 diffExp1.3=-1,-1,-1,-1,-1,-1,-1,-1 diffExp1.3Score=0.888888888888889 diffExp1.2=-1,-1,-1,-1,-1,-1,-1,-1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 97.7801025147624 86.203208582448 100.779061345912 cerebhem 84.7741971930763 80.0653108389878 73.6923339148818 cortex 93.583585411468 101.147937036586 100.392619582313 heart 95.1405975533653 113.608616031570 77.3305104131352 kidney 95.5733653598937 81.5186922417281 74.7443819805794 liver 93.3214926342596 122.77331233637 98.1223918801121 stomach 94.5133381029642 110.333027102054 65.7365705746904 testicle 90.196343252737 79.8484679651208 129.403395118153 cont.diffExp=11.5768939323144,4.70888635408855,-7.5643516251185,-18.4680184782043,14.0546731181657,-29.4518197021102,-15.8196889990896,10.3478752876162 cont.diffExpScore=3.54231405427935 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,-1,0,0 cont.diffExp1.3Score=0.5 cont.diffExp1.2=0,0,0,0,0,-1,0,0 cont.diffExp1.2Score=0.5 tran.correlation=0.509248665333585 cont.tran.correlation=0.336839716601665 tran.covariance=0.00944098073434438 cont.tran.covariance=0.00283640157447694 tran.mean=176.778549955071 cont.tran.mean=95.023849634837 weightedLogRatios: wLogRatio Lung -7.48049014375566 cerebhem -4.08043474405911 cortex -5.3455337712094 heart -6.41168452375642 kidney -8.23152312797849 liver -7.93574934653189 stomach -5.96313794160833 testicle -8.4417126132062 cont.weightedLogRatios: wLogRatio Lung 0.569545943301554 cerebhem 0.252105998524669 cortex -0.355822342552171 heart -0.82387242296253 kidney 0.712654777673236 liver -1.28180704502363 stomach -0.71594950001731 testicle 0.541179541714416 varWeightedLogRatios=2.40394683189396 cont.varWeightedLogRatios=0.57112708133035 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 5.73611131068102 0.0925628354518514 61.9699178690868 1.0166813674979e-289 *** df.mm.trans1 -1.86578834026315 0.0814348498894465 -22.9114235833440 1.53096942071772e-87 *** df.mm.trans2 0.067712652535164 0.0736307167222725 0.919625063417069 0.358078867436745 df.mm.exp2 -0.712688126662579 0.0981116578313201 -7.26405141260459 9.84499194235674e-13 *** df.mm.exp3 -0.611165473022939 0.09811165783132 -6.22928494464638 7.99509740767192e-10 *** df.mm.exp4 -0.308952333293495 0.09811165783132 -3.14898698200235 0.00170654487849004 ** df.mm.exp5 0.0552480187861383 0.09811165783132 0.563113701341427 0.573533997391571 df.mm.exp6 0.101526333528964 0.0981116578313201 1.03480397511491 0.301110325600009 df.mm.exp7 -0.150437471403879 0.09811165783132 -1.53332921621323 0.125637095875314 df.mm.exp8 0.217994691287272 0.09811165783132 2.22190406426586 0.0266020531864888 * df.mm.trans1:exp2 0.711070139664915 0.0923009881508712 7.70381936217876 4.41510861817391e-14 *** df.mm.trans2:exp2 0.087228225126857 0.0758512355975192 1.14999082664528 0.250532139450685 df.mm.trans1:exp3 0.473325964132756 0.0923009881508712 5.1280703881423 3.77307012399866e-07 *** df.mm.trans2:exp3 0.118990036389960 0.0758512355975192 1.56872904511857 0.117153510229043 df.mm.trans1:exp4 0.221825955339613 0.0923009881508712 2.40328906313577 0.0165020284648022 * df.mm.trans2:exp4 0.0538422872502896 0.0758512355975192 0.709840608740863 0.478034411099409 df.mm.trans1:exp5 -0.0744319356183322 0.0923009881508712 -0.806404537042106 0.420277764449118 df.mm.trans2:exp5 0.0598108604472042 0.0758512355975192 0.788528492331645 0.430648999249135 df.mm.trans1:exp6 -0.0798283498315875 0.0923009881508713 -0.864869937265498 0.387400250353299 df.mm.trans2:exp6 -0.00714115044727192 0.0758512355975192 -0.0941467912950581 0.92501892745221 df.mm.trans1:exp7 0.194745060443694 0.0923009881508712 2.10989139277006 0.0352145802959196 * df.mm.trans2:exp7 -0.0848007987523572 0.0758512355975192 -1.11798836346353 0.263947455571599 df.mm.trans1:exp8 -0.180844012215374 0.0923009881508712 -1.95928576538936 0.0504675295876964 . df.mm.trans2:exp8 -0.0266426898754791 0.0758512355975192 -0.351249253431416 0.725504838318862 df.mm.trans1:probe2 -0.00331976820429891 0.0538921663653889 -0.061600199587281 0.95089843274979 df.mm.trans1:probe3 0.399934850216249 0.0538921663653889 7.42102010716532 3.30713016178125e-13 *** df.mm.trans1:probe4 0.231792008427204 0.0538921663653889 4.30103341653876 1.93635390644397e-05 *** df.mm.trans1:probe5 0.0933598727305158 0.0538921663653889 1.73234588673864 0.0836432330963378 . df.mm.trans1:probe6 0.0380979044609491 0.0538921663653889 0.706928428199477 0.479841277092488 df.mm.trans1:probe7 0.543601923445894 0.0538921663653889 10.0868448998742 1.84656173446219e-22 *** df.mm.trans1:probe8 0.488619219790732 0.0538921663653889 9.0666093561334 1.16492376320005e-18 *** df.mm.trans1:probe9 0.0319743795436508 0.0538921663653889 0.593302917660881 0.553166070889991 df.mm.trans1:probe10 1.02931555587879 0.0538921663653889 19.0995394191435 5.0625233664838e-66 *** df.mm.trans1:probe11 0.859406904971095 0.0538921663653889 15.9467871294005 3.30445710589425e-49 *** df.mm.trans1:probe12 1.26717958721404 0.0538921663653889 23.5132426969545 5.23552085361807e-91 *** df.mm.trans1:probe13 1.01212143295294 0.0538921663653889 18.7804926246749 2.86244216181494e-64 *** df.mm.trans1:probe14 1.60558352360974 0.0538921663653889 29.7925214719313 1.96076202712598e-127 *** df.mm.trans1:probe15 1.61676888234047 0.0538921663653889 30.0000722067615 1.24003805737239e-128 *** df.mm.trans1:probe16 0.199824139840615 0.0538921663653889 3.70785131341367 0.000225205578371028 *** df.mm.trans1:probe17 0.239439334762869 0.0538921663653889 4.44293393476651 1.02808814697150e-05 *** df.mm.trans1:probe18 0.304672179542516 0.0538921663653889 5.65336671524464 2.27425970583123e-08 *** df.mm.trans1:probe19 0.129402134465543 0.0538921663653889 2.40113068730985 0.0165988846192668 * df.mm.trans1:probe20 0.145218518010566 0.0538921663653889 2.69461273881596 0.0072124969544375 ** df.mm.trans1:probe21 0.104013347644618 0.0538921663653889 1.93002721284960 0.0539987038036426 . df.mm.trans2:probe2 0.100282482836907 0.0538921663653889 1.86079888043452 0.0631828679937484 . df.mm.trans2:probe3 -0.374840751197405 0.0538921663653889 -6.95538473358047 7.94814988066229e-12 *** df.mm.trans2:probe4 -0.050936179343873 0.0538921663653889 -0.945149968522804 0.344901597121281 df.mm.trans2:probe5 -0.235267858254066 0.0538921663653889 -4.36552979998893 1.45535303040477e-05 *** df.mm.trans2:probe6 0.0771248276119522 0.0538921663653889 1.43109533005309 0.152839811180427 df.mm.trans3:probe2 0.0643095217066015 0.0538921663653889 1.19329999225830 0.233147706154338 df.mm.trans3:probe3 0.232315990902243 0.0538921663653889 4.31075621134138 1.85520261573864e-05 *** df.mm.trans3:probe4 0.114579460949677 0.0538921663653889 2.12608749429051 0.0338379931976790 * df.mm.trans3:probe5 0.0306929660067073 0.0538921663653888 0.569525555877806 0.56917841143949 cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.65546868853989 0.349980147035112 13.3020936415368 3.10382555571896e-36 *** df.mm.trans1 -0.0966978127259143 0.307905225666039 -0.314050573570956 0.75357423452742 df.mm.trans2 -0.154925944322770 0.278397792580221 -0.55649128136721 0.578049174517635 df.mm.exp2 0.0964372330970709 0.370960248419845 0.259966488344393 0.794964464127494 df.mm.exp3 0.119852576697688 0.370960248419845 0.323087385260864 0.746723527246928 df.mm.exp4 0.513528645702599 0.370960248419845 1.38432257334861 0.166691593716197 df.mm.exp5 0.220154575063503 0.370960248419845 0.593472146951811 0.553052904826579 df.mm.exp6 0.333676615712729 0.370960248419845 0.899494264234696 0.368692280661135 df.mm.exp7 0.64009098353301 0.370960248419845 1.72549750616020 0.0848699231054329 . df.mm.exp8 -0.407312941000874 0.370960248419845 -1.09799619429812 0.272575765515213 df.mm.trans1:exp2 -0.239167120557364 0.348990102202859 -0.685312044805048 0.493369148791751 df.mm.trans2:exp2 -0.170301945508321 0.286793576035421 -0.59381366857146 0.552824559047059 df.mm.trans1:exp3 -0.163718683701332 0.348990102202859 -0.46912128071233 0.639125958389354 df.mm.trans2:exp3 0.040024192106384 0.286793576035421 0.139557491697237 0.889048929050447 df.mm.trans1:exp4 -0.540893979511205 0.348990102202859 -1.54988343823229 0.121611986277787 df.mm.trans2:exp4 -0.237476696454443 0.286793576035421 -0.82804050124579 0.407923859302132 df.mm.trans1:exp5 -0.242981504418325 0.348990102202859 -0.696241821428751 0.486503662435906 df.mm.trans2:exp5 -0.276029627965851 0.286793576035421 -0.962467959644116 0.336139972039977 df.mm.trans1:exp6 -0.380347279465075 0.348990102202859 -1.08985119367078 0.276145864631533 df.mm.trans2:exp6 0.0199556506193764 0.286793576035421 0.0695819303041561 0.94454587501784 df.mm.trans1:exp7 -0.674071120619027 0.348990102202859 -1.93149065364383 0.0538172988351002 . df.mm.trans2:exp7 -0.393295071849100 0.286793576035421 -1.37135244549734 0.170695330727507 df.mm.trans1:exp8 0.326580721239821 0.348990102202859 0.935787918277373 0.349698340141795 df.mm.trans2:exp8 0.330736229556219 0.286793576035421 1.15322049443454 0.249205262166247 df.mm.trans1:probe2 -0.062649493702325 0.203766319565811 -0.307457551551305 0.758584660172292 df.mm.trans1:probe3 -0.168721991186679 0.203766319565811 -0.828017071448291 0.407937119100785 df.mm.trans1:probe4 0.0380893062487720 0.203766319565811 0.186926408299141 0.851771360054259 df.mm.trans1:probe5 -0.185807387712678 0.203766319565811 -0.911865062433278 0.362147089888555 df.mm.trans1:probe6 0.0305300176000316 0.203766319565811 0.149828576504132 0.880942116118221 df.mm.trans1:probe7 -0.0616831836326272 0.203766319565811 -0.302715305277452 0.762194878131056 df.mm.trans1:probe8 -0.0678944107477563 0.203766319565811 -0.333197414039901 0.739082950301776 df.mm.trans1:probe9 0.218460730124233 0.203766319565811 1.07211403037427 0.284030547720302 df.mm.trans1:probe10 0.213991675076161 0.203766319565811 1.05018177455498 0.293989368071747 df.mm.trans1:probe11 -0.0130074009564900 0.203766319565811 -0.0638348917731173 0.949119537023985 df.mm.trans1:probe12 -0.00340793314613414 0.203766319565811 -0.0167247126679023 0.986660897764447 df.mm.trans1:probe13 0.207868657684601 0.203766319565811 1.02013256227786 0.308010636658047 df.mm.trans1:probe14 0.160860142270237 0.203766319565811 0.789434400213936 0.43011986031186 df.mm.trans1:probe15 0.0763502460439137 0.203766319565811 0.374695122366651 0.70799832584302 df.mm.trans1:probe16 0.110692071347884 0.203766319565811 0.543230459203214 0.587140447619921 df.mm.trans1:probe17 -0.0174665131926598 0.203766319565811 -0.0857183524238834 0.931714309606467 df.mm.trans1:probe18 -0.0254958116255527 0.203766319565811 -0.125122795955091 0.900461507211291 df.mm.trans1:probe19 0.226218766218405 0.203766319565811 1.11018723163100 0.267291575156895 df.mm.trans1:probe20 0.0120280335132428 0.203766319565811 0.0590285653628745 0.952945849450072 df.mm.trans1:probe21 -0.0662495465014799 0.203766319565811 -0.325125107243659 0.745181497869003 df.mm.trans2:probe2 -0.181371333933983 0.203766319565811 -0.890094763062182 0.373714393213666 df.mm.trans2:probe3 -0.169937610758838 0.203766319565811 -0.833982824644152 0.404569192319406 df.mm.trans2:probe4 -0.263063762865925 0.203766319565811 -1.29100708805296 0.197118470512853 df.mm.trans2:probe5 0.0953298479796278 0.203766319565811 0.46783908244875 0.640042233597302 df.mm.trans2:probe6 0.0368540678129669 0.203766319565811 0.180864373913688 0.856525286806499 df.mm.trans3:probe2 0.299360073939740 0.203766319565811 1.46913422481999 0.142236216909302 df.mm.trans3:probe3 0.457634890856581 0.203766319565811 2.24588092787718 0.0250162442792391 * df.mm.trans3:probe4 0.159894288604187 0.203766319565811 0.784694393778585 0.432892675295048 df.mm.trans3:probe5 0.128539135726287 0.203766319565811 0.630816397921797 0.528362159539288