fitVsDatCorrelation=0.808989416262022 cont.fitVsDatCorrelation=0.326273858493049 fstatistic=8952.95625001655,52,692 cont.fstatistic=3453.96794845245,52,692 residuals=-0.510800350308542,-0.0919118061991063,-0.0134444567505621,0.0773513212914,1.53971568901259 cont.residuals=-0.634779847631176,-0.166189590858915,-0.0312267053218264,0.116443221925973,1.71839437716250 predictedValues: Include Exclude Both Lung 67.9123250921763 47.135297472507 79.8209889753573 cerebhem 77.0354568856703 51.0556326062033 77.9528928473657 cortex 85.1699814291855 51.9415483691635 112.671289578266 heart 69.2650822666188 50.2269472883499 88.978519928124 kidney 61.3603792480276 44.6249847467243 62.9985040143454 liver 56.2699536568302 49.5282263656638 60.5505709439928 stomach 61.2746357860003 45.9410407766202 77.6355662203833 testicle 60.0800111101412 45.9541355855885 64.287142427551 diffExp=20.7770276196693,25.9798242794669,33.228433060022,19.0381349782689,16.7353945013033,6.74172729116639,15.3335950093800,14.1258755245527 diffExpScore=0.993462343620402 diffExp1.5=0,1,1,0,0,0,0,0 diffExp1.5Score=0.666666666666667 diffExp1.4=1,1,1,0,0,0,0,0 diffExp1.4Score=0.75 diffExp1.3=1,1,1,1,1,0,1,1 diffExp1.3Score=0.875 diffExp1.2=1,1,1,1,1,0,1,1 diffExp1.2Score=0.875 cont.predictedValues: Include Exclude Both Lung 63.4974204112284 57.9599557554063 74.276004162506 cerebhem 62.2261676317534 66.5951984003782 69.065450086413 cortex 61.7741390974715 60.9844399009573 53.7351005534636 heart 59.927526026641 72.5095306466033 58.0819554264309 kidney 63.0143548161942 69.3982042216044 54.654214939403 liver 65.2215943403516 66.9595621058039 62.8846598045928 stomach 63.9350147794967 58.432448680622 65.9690485533255 testicle 70.0952910234502 63.4070393512583 64.9956725070781 cont.diffExp=5.53746465582212,-4.36903076862487,0.789699196514213,-12.5820046199623,-6.38384940541022,-1.73796776545232,5.50256609887472,6.68825167219194 cont.diffExpScore=5.76989793099797 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,-1,0,0,0,0 cont.diffExp1.2Score=0.5 tran.correlation=0.723434958862035 cont.tran.correlation=-0.30035940451172 tran.covariance=0.00551217459464196 cont.tran.covariance=-0.00110793386750588 tran.mean=57.7984774178419 cont.tran.mean=64.1211179493263 weightedLogRatios: wLogRatio Lung 1.47378980225992 cerebhem 1.70240901391850 cortex 2.07573242698913 heart 1.31038306704620 kidney 1.26035603736984 liver 0.506177767898077 stomach 1.14378070568709 testicle 1.06185712382137 cont.weightedLogRatios: wLogRatio Lung 0.374602929778043 cerebhem -0.282603764809972 cortex 0.0529702666833052 heart -0.798239115141244 kidney -0.404483983546469 liver -0.110214468835269 stomach 0.370141000441493 testicle 0.421150513711345 varWeightedLogRatios=0.214940797840529 cont.varWeightedLogRatios=0.190367822114540 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.54114225293487 0.088517674457937 40.0049173752028 3.76836708074214e-182 *** df.mm.trans1 0.808280111991951 0.079501816401237 10.1668131444023 1.00372562994393e-22 *** df.mm.trans2 0.206932626707514 0.0731127175177324 2.83032328346058 0.00478496234844227 ** df.mm.exp2 0.229623779444625 0.100146316582513 2.29288292650717 0.0221538481141941 * df.mm.exp3 -0.0211597627825355 0.100146316582513 -0.211288477745475 0.832724380851431 df.mm.exp4 -0.0253555770933526 0.100146316582513 -0.253185318827593 0.800200206736112 df.mm.exp5 0.0804940730526176 0.100146316582513 0.803764689501054 0.421808896082475 df.mm.exp6 0.137771364595502 0.100146316582513 1.37570076760625 0.169359397761521 df.mm.exp7 -0.100753994842508 0.100146316582513 -1.00606790424982 0.314734562979845 df.mm.exp8 0.0685082073148964 0.100146316582513 0.684081148990148 0.494152939366592 df.mm.trans1:exp2 -0.103575520930598 0.0958827982380458 -1.08023047756130 0.280415895900418 df.mm.trans2:exp2 -0.149730041736104 0.0834552638187607 -1.79413538325481 0.0732279802136011 . df.mm.trans1:exp3 0.247591267505019 0.0958827982380458 2.58222822085700 0.0100208110941781 * df.mm.trans2:exp3 0.118256643396947 0.0834552638187607 1.41700640541697 0.156931094630797 df.mm.trans1:exp4 0.0450789565244403 0.0958827982380458 0.470146442874184 0.638398525223807 df.mm.trans2:exp4 0.0888851224360087 0.0834552638187607 1.06506310529483 0.287218849819072 df.mm.trans1:exp5 -0.181947271694625 0.0958827982380459 -1.89760076925279 0.0581646584475803 . df.mm.trans2:exp5 -0.135222310665892 0.0834552638187607 -1.62029696484518 0.105624072288141 df.mm.trans1:exp6 -0.325828191122796 0.0958827982380458 -3.39819234638804 0.000717191038726574 *** df.mm.trans2:exp6 -0.0882507638335324 0.0834552638187607 -1.05746192385403 0.290669825395027 df.mm.trans1:exp7 -0.00209755607230507 0.0958827982380458 -0.0218762500766563 0.982552976197407 df.mm.trans2:exp7 0.0750907110727849 0.0834552638187607 0.899772017207434 0.36855458658249 df.mm.trans1:exp8 -0.191048551322977 0.0958827982380458 -1.99252164969848 0.0467062492600752 * df.mm.trans2:exp8 -0.0938864966034007 0.0834552638187607 -1.12499190952525 0.260982510559898 df.mm.trans1:probe2 -0.144255485810906 0.0479413991190229 -3.00899615909763 0.0027163215685347 ** df.mm.trans1:probe3 0.0315162363241033 0.0479413991190229 0.657390833460216 0.511148235637697 df.mm.trans1:probe4 -0.364682040625592 0.0479413991190229 -7.60682932344558 9.1965021889601e-14 *** df.mm.trans1:probe5 -0.252332315257983 0.0479413991190229 -5.26334900305108 1.88934194940556e-07 *** df.mm.trans1:probe6 -0.320802433980156 0.0479413991190229 -6.69155343555385 4.56184611141923e-11 *** df.mm.trans1:probe7 -0.286503454799632 0.0479413991190229 -5.97611792864736 3.65772807523901e-09 *** df.mm.trans1:probe8 -0.203548905153396 0.0479413991190229 -4.24578566528796 2.4757638204975e-05 *** df.mm.trans1:probe9 -0.280743800744426 0.0479413991190229 -5.8559784633617 7.32785353966231e-09 *** df.mm.trans1:probe10 0.0364713040053781 0.0479413991190229 0.760747593428212 0.447066976872138 df.mm.trans1:probe11 -0.330206827373206 0.0479413991190229 -6.88771778548661 1.27517951809197e-11 *** df.mm.trans1:probe12 -0.0313435839119194 0.0479413991190229 -0.653789511526426 0.513464614359237 df.mm.trans1:probe13 -0.299418299389109 0.0479413991190229 -6.24550607389974 7.37300437871486e-10 *** df.mm.trans1:probe14 -0.0680935930073732 0.0479413991190229 -1.42035055836228 0.155956032963472 df.mm.trans1:probe15 -0.269047177566077 0.0479413991190229 -5.61200095345822 2.89489248037855e-08 *** df.mm.trans1:probe16 -0.251360498531879 0.0479413991190229 -5.24307807345865 2.10035087535422e-07 *** df.mm.trans1:probe17 -0.0337916459319682 0.0479413991190229 -0.704853144733521 0.48113879041 df.mm.trans1:probe18 -0.0429919730545865 0.0479413991190229 -0.896760917382728 0.370158367221884 df.mm.trans1:probe19 -0.061221814403946 0.0479413991190229 -1.27701351084795 0.202025797816338 df.mm.trans1:probe20 -0.046197187968236 0.0479413991190229 -0.963617850483325 0.335574162264395 df.mm.trans1:probe21 -0.0428241330361245 0.0479413991190229 -0.893259976201489 0.372028501905429 df.mm.trans1:probe22 -0.0187430832934035 0.0479413991190229 -0.390958203928729 0.695948466741971 df.mm.trans2:probe2 0.146784058210460 0.0479413991190229 3.06173914211479 0.00228578982766430 ** df.mm.trans2:probe3 0.108035776996945 0.0479413991190229 2.25349653915454 0.0245400851071884 * df.mm.trans2:probe4 0.366000854582381 0.0479413991190229 7.63433819846851 7.55496018870187e-14 *** df.mm.trans2:probe5 0.0718448565769582 0.0479413991190229 1.49859741053011 0.134434127579808 df.mm.trans2:probe6 0.251859759978115 0.0479413991190229 5.25349206753079 1.98924604337086e-07 *** df.mm.trans3:probe2 -0.435017836912536 0.0479413991190229 -9.0739495489593 1.17570723183014e-18 *** df.mm.trans3:probe3 -0.0946876691500934 0.0479413991190229 -1.97507104277484 0.0486571155782573 * cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.98982354889309 0.142344788324429 28.0292913836759 4.20913705015026e-116 *** df.mm.trans1 0.194157423304945 0.127846436277755 1.5186768513682 0.129300575684065 df.mm.trans2 0.0931492252895883 0.117572161295661 0.792272798790729 0.428473140352865 df.mm.exp2 0.191389789687208 0.161044744145228 1.18842617747659 0.23507323763262 df.mm.exp3 0.347073439208988 0.161044744145228 2.15513670471607 0.031495398203304 * df.mm.exp4 0.412035210285873 0.161044744145228 2.55851386192589 0.0107237907945880 * df.mm.exp5 0.47923351342124 0.161044744145228 2.97577866303463 0.00302433316111247 ** df.mm.exp6 0.337613555538806 0.161044744145228 2.09639598815067 0.0364096123754985 * df.mm.exp7 0.133589171397211 0.161044744145228 0.829515872164955 0.407098608973733 df.mm.exp8 0.322146116909872 0.161044744145228 2.00035163283172 0.0458525861285554 * df.mm.trans1:exp2 -0.211613458565263 0.154188603606325 -1.37243255088785 0.170373481855657 df.mm.trans2:exp2 -0.0525096649182397 0.134203953454356 -0.391267645748592 0.695719853713204 df.mm.trans1:exp3 -0.374587905158898 0.154188603606325 -2.42941369464178 0.0153767330531675 * df.mm.trans2:exp3 -0.296207045253802 0.134203953454356 -2.20714097930464 0.0276317061615517 * df.mm.trans1:exp4 -0.469898559346677 0.154188603606325 -3.04755700717301 0.00239493664780327 ** df.mm.trans2:exp4 -0.188069553958365 0.134203953454356 -1.40137119002480 0.161551423205572 df.mm.trans1:exp5 -0.486870240387503 0.154188603606325 -3.15762792450331 0.00165969562852807 ** df.mm.trans2:exp5 -0.299124876100563 0.134203953454356 -2.22888274451838 0.0261420713932639 * df.mm.trans1:exp6 -0.310822221530455 0.154188603606325 -2.01585729593899 0.0442009146186284 * df.mm.trans2:exp6 -0.193277023105411 0.134203953454356 -1.44017384086338 0.150270473050954 df.mm.trans1:exp7 -0.126721279597963 0.154188603606325 -0.821858922346223 0.411440265321093 df.mm.trans2:exp7 -0.125470161862231 0.134203953454356 -0.934921502926546 0.350154879200168 df.mm.trans1:exp8 -0.223289781883045 0.154188603606325 -1.44816008875176 0.148025202945557 df.mm.trans2:exp8 -0.232323584941118 0.134203953454356 -1.73112325651519 0.0838755088396866 . df.mm.trans1:probe2 0.0670781564175409 0.0770943018031623 0.870079303510722 0.384558773152877 df.mm.trans1:probe3 -0.00350969557641147 0.0770943018031623 -0.0455247079787096 0.963702215026893 df.mm.trans1:probe4 0.0907724177209864 0.0770943018031624 1.17742058229864 0.239432468962742 df.mm.trans1:probe5 -0.0559305415569259 0.0770943018031623 -0.725482172466237 0.468401542734036 df.mm.trans1:probe6 -0.100149248271006 0.0770943018031624 -1.29904864469371 0.194359894265638 df.mm.trans1:probe7 -0.0896281891770275 0.0770943018031624 -1.16257864823611 0.245401268200690 df.mm.trans1:probe8 -0.00528220423553504 0.0770943018031624 -0.0685161433723285 0.945394562312306 df.mm.trans1:probe9 0.0136886950680486 0.0770943018031623 0.177557805802544 0.859122223841746 df.mm.trans1:probe10 0.00973087726021753 0.0770943018031624 0.126220447330368 0.899594089279783 df.mm.trans1:probe11 -0.0132226461883694 0.0770943018031623 -0.171512626473090 0.863870844088114 df.mm.trans1:probe12 -0.04829021026232 0.0770943018031624 -0.626378462906569 0.531273294990646 df.mm.trans1:probe13 -0.0457972125411215 0.0770943018031624 -0.594041472196625 0.552678515967367 df.mm.trans1:probe14 -0.116987536690778 0.0770943018031624 -1.51746022669057 0.129607214057528 df.mm.trans1:probe15 -0.146281617344649 0.0770943018031624 -1.89743747492695 0.0581862258881389 . df.mm.trans1:probe16 0.0129676583495100 0.0770943018031623 0.168205146764531 0.866471040143933 df.mm.trans1:probe17 -0.0260432580208755 0.0770943018031624 -0.337810414151869 0.735608511299013 df.mm.trans1:probe18 -0.0539820292969797 0.0770943018031624 -0.700207771967466 0.484032894214527 df.mm.trans1:probe19 -0.088142389510802 0.0770943018031624 -1.14330615167704 0.253306868951151 df.mm.trans1:probe20 -0.167620211755407 0.0770943018031623 -2.17422309865878 0.0300265455733264 * df.mm.trans1:probe21 -0.0598288293291036 0.0770943018031623 -0.776047359269937 0.437986170270176 df.mm.trans1:probe22 0.00191575069698157 0.0770943018031624 0.0248494460961963 0.980182214780353 df.mm.trans2:probe2 0.0580651386183827 0.0770943018031624 0.753170302607253 0.451603738078442 df.mm.trans2:probe3 -0.13884257625864 0.0770943018031624 -1.80094472627995 0.0721468542324162 . df.mm.trans2:probe4 -0.0152143351824318 0.0770943018031624 -0.197347077884915 0.843613891684897 df.mm.trans2:probe5 0.0546377159862416 0.0770943018031624 0.708712767459039 0.478741414591156 df.mm.trans2:probe6 -0.167629724016442 0.0770943018031624 -2.17434648340723 0.0300172454179389 * df.mm.trans3:probe2 0.0573177361386936 0.0770943018031624 0.743475649925951 0.457446100630068 df.mm.trans3:probe3 0.0346554937366824 0.0770943018031624 0.449520819647151 0.653196753386723