fitVsDatCorrelation=0.870066365649864 cont.fitVsDatCorrelation=0.26003112466451 fstatistic=8947.9997032379,57,807 cont.fstatistic=2321.43129421852,57,807 residuals=-0.861389267313751,-0.0877455414319696,-0.0053312095834252,0.0862602314740853,1.21883144452174 cont.residuals=-0.687664286386577,-0.250815056851998,-0.0557390260467516,0.185676775238552,1.48270238326395 predictedValues: Include Exclude Both Lung 66.152748461207 54.3456724967115 64.1529582882475 cerebhem 62.8659289795321 66.2305278755919 67.4910544406228 cortex 67.9067546851757 56.4917383079373 73.4201200448556 heart 67.2194527647266 56.9627244048675 71.158681298055 kidney 69.0406301662244 55.4228465250006 69.643924414054 liver 66.5087544102809 52.3122141906963 63.7988877454407 stomach 67.7741705539834 57.3160420577314 67.5928649785953 testicle 72.6085311969143 53.1761981102056 80.5399159303446 diffExp=11.8070759644955,-3.36459889605979,11.4150163772384,10.2567283598590,13.6177836412239,14.1965402195846,10.4581284962520,19.4323330867087 diffExpScore=1.06450418631722 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,1 diffExp1.3Score=0.5 diffExp1.2=1,0,1,0,1,1,0,1 diffExp1.2Score=0.833333333333333 cont.predictedValues: Include Exclude Both Lung 69.8970024523888 72.8792726120366 67.8959343277076 cerebhem 68.921717663244 60.7233834371943 66.7295662210602 cortex 62.9494400574576 58.3585425629615 71.2704986539174 heart 64.3710785566177 72.0534646402147 67.8779052454761 kidney 74.5284386393944 73.7263226135827 70.872549582196 liver 67.3201731552783 59.2616537051673 71.6791968554762 stomach 66.2462269288576 59.7536672752569 69.13490396322 testicle 66.6430122484502 70.7997793308244 65.0323779137008 cont.diffExp=-2.98227015964783,8.1983342260497,4.59089749449614,-7.68238608359705,0.802116025811713,8.05851945011106,6.49255965360071,-4.15676708237424 cont.diffExpScore=3.00005862733966 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=-0.681510743891908 cont.tran.correlation=0.482928847055525 tran.covariance=-0.00203161069497884 cont.tran.covariance=0.00262648856766399 tran.mean=62.0209334491742 cont.tran.mean=66.7770734924329 weightedLogRatios: wLogRatio Lung 0.804820619502018 cerebhem -0.217259329057311 cortex 0.759374762880455 heart 0.682987822341398 kidney 0.906241627450498 liver 0.978970428476224 stomach 0.692589537144559 testicle 1.28617393083332 cont.weightedLogRatios: wLogRatio Lung -0.178319859949601 cerebhem 0.528054830365519 cortex 0.310815478142361 heart -0.475896388821934 kidney 0.0465922451535957 liver 0.528567787158341 stomach 0.427218628018659 testicle -0.255915030364788 varWeightedLogRatios=0.187054944220524 cont.varWeightedLogRatios=0.150701999069223 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.01903738439006 0.0820811684610716 48.9641833777763 7.25884433257717e-244 *** df.mm.trans1 0.126801256791432 0.0712766894350566 1.77900036879471 0.0756160385886293 . df.mm.trans2 -0.0728159590086008 0.06335473775325 -1.14933723334472 0.250757464189224 df.mm.exp2 0.0960895668510708 0.0823417902197999 1.16695989478214 0.243571273052036 df.mm.exp3 -0.0700293217435615 0.0823417902197999 -0.85047120734961 0.395315419959861 df.mm.exp4 -0.0406137746858518 0.0823417902197999 -0.493234050139535 0.621981410605162 df.mm.exp5 -0.0197696119797377 0.0823417902197999 -0.240092083581926 0.810319843975898 df.mm.exp6 -0.0272335087133235 0.0823417902197999 -0.330737389126803 0.740928708947849 df.mm.exp7 0.0251980569248841 0.0823417902198 0.306017841701296 0.759669987815312 df.mm.exp8 -0.156120815754223 0.0823417902198 -1.8960094908974 0.0583157678813327 . df.mm.trans1:exp2 -0.147051658162538 0.0765897521585717 -1.91999130455575 0.0552112211574439 . df.mm.trans2:exp2 0.101686948432102 0.0585506281207798 1.73673539799333 0.0828154733297678 . df.mm.trans1:exp3 0.096198392639825 0.0765897521585717 1.25602172521273 0.209471593381534 df.mm.trans2:exp3 0.108758737044261 0.0585506281207798 1.85751614517115 0.0636018353639893 . df.mm.trans1:exp4 0.0566100173704485 0.0765897521585717 0.73913305337825 0.460041134240827 df.mm.trans2:exp4 0.0876458832658276 0.0585506281207799 1.49692473127751 0.134803836815865 df.mm.trans1:exp5 0.0624983476456663 0.0765897521585717 0.816014491289506 0.414732637896131 df.mm.trans2:exp5 0.039396525349175 0.0585506281207798 0.672862556963638 0.501227359176293 df.mm.trans1:exp6 0.0326006543579513 0.0765897521585717 0.425652955377826 0.670474236891956 df.mm.trans2:exp6 -0.0109015940726975 0.0585506281207798 -0.186190898758752 0.852341852591235 df.mm.trans1:exp7 -0.000983338464808767 0.0765897521585717 -0.0128390344281681 0.989759387359486 df.mm.trans2:exp7 0.0280175061945734 0.0585506281207799 0.478517602523035 0.632411460737967 df.mm.trans1:exp8 0.249236801660547 0.0765897521585717 3.25417950360416 0.00118454527421506 ** df.mm.trans2:exp8 0.134366720521757 0.0585506281207799 2.29488094038175 0.0219957799714927 * df.mm.trans1:probe2 -0.245224733465756 0.0501397623892232 -4.89082360546772 1.21208405260934e-06 *** df.mm.trans1:probe3 -0.164134116371323 0.0501397623892232 -3.27353199437182 0.00110733463356892 ** df.mm.trans1:probe4 0.693818346403034 0.0501397623892232 13.8376871636743 3.122471610315e-39 *** df.mm.trans1:probe5 0.101160220400908 0.0501397623892232 2.01756481444057 0.043967168299507 * df.mm.trans1:probe6 0.160225268002610 0.0501397623892232 3.19557294186636 0.00144980822529100 ** df.mm.trans1:probe7 0.558811279189326 0.0501397623892232 11.1450723450064 6.23225961119848e-27 *** df.mm.trans1:probe8 -0.30700095263831 0.0501397623892232 -6.12290401887296 1.43360713522980e-09 *** df.mm.trans1:probe9 -0.332044328069858 0.0501397623892232 -6.62237538128474 6.44895111522036e-11 *** df.mm.trans1:probe10 0.741391056874932 0.0501397623892232 14.7864892362211 5.87497014843106e-44 *** df.mm.trans1:probe11 0.283154250053389 0.0501397623892232 5.64729939993191 2.25840992093410e-08 *** df.mm.trans1:probe12 0.349078389215866 0.0501397623892232 6.96210697023357 6.94801124637956e-12 *** df.mm.trans1:probe13 0.141489667293367 0.0501397623892232 2.82190542099135 0.00489125145291666 ** df.mm.trans1:probe14 0.10161797314426 0.0501397623892232 2.02669434999359 0.0430220493595716 * df.mm.trans1:probe15 0.457141053184584 0.0501397623892232 9.11733585085437 5.99784838189615e-19 *** df.mm.trans1:probe16 0.135958786433998 0.0501397623892232 2.71159614556171 0.00683840889415686 ** df.mm.trans1:probe17 -0.277729848117433 0.0501397623892232 -5.53911376686393 4.11537311566204e-08 *** df.mm.trans1:probe18 -0.292270696641763 0.0501397623892232 -5.82912009779652 8.05316949976457e-09 *** df.mm.trans1:probe19 -0.206652179624739 0.0501397623892232 -4.12152291469884 4.15279762641586e-05 *** df.mm.trans1:probe20 -0.101625240819467 0.0501397623892232 -2.02683929833122 0.0430071836764965 * df.mm.trans1:probe21 -0.190339227008322 0.0501397623892232 -3.79617329517366 0.000157954000524538 *** df.mm.trans1:probe22 -0.222991044281400 0.0501397623892232 -4.44738933045540 9.91000156120338e-06 *** df.mm.trans2:probe2 0.122583751243825 0.0501397623892232 2.44484108824122 0.0147044819247783 * df.mm.trans2:probe3 0.0663234882249161 0.0501397623892232 1.32277228819041 0.186285823755424 df.mm.trans2:probe4 0.269841847285070 0.0501397623892232 5.3817934993459 9.6723756739217e-08 *** df.mm.trans2:probe5 0.0738701352857216 0.0501397623892232 1.47328451045071 0.141064262353317 df.mm.trans2:probe6 0.155390647921844 0.0501397623892232 3.09915006608095 0.00200810116746659 ** df.mm.trans3:probe2 0.387577905324388 0.0501397623892232 7.72995097814209 3.19917709583003e-14 *** df.mm.trans3:probe3 0.266577584913644 0.0501397623892232 5.31669023168208 1.36894474355205e-07 *** df.mm.trans3:probe4 0.173125473120258 0.0501397623892232 3.4528578690965 0.000583561194709883 *** df.mm.trans3:probe5 -0.257727433837394 0.0501397623892232 -5.14018059831869 3.44599817635307e-07 *** df.mm.trans3:probe6 -0.165122907126937 0.0501397623892232 -3.29325268526657 0.00103347276714818 ** df.mm.trans3:probe7 0.506445490146529 0.0501397623892232 10.1006759109689 1.14167607097859e-22 *** df.mm.trans3:probe8 -0.204895928565120 0.0501397623892232 -4.08649580296296 4.81702876869425e-05 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.4126853353513 0.160787243692210 27.4442501408779 1.20959081802384e-117 *** df.mm.trans1 -0.153794296730983 0.139622554705757 -1.10150037760799 0.271007356498506 df.mm.trans2 -0.125747136196511 0.124104393847890 -1.01323677830967 0.311250764248938 df.mm.exp2 -0.17919882078697 0.161297770710987 -1.11098138552738 0.266907255030761 df.mm.exp3 -0.375395744445971 0.161297770710987 -2.32734614242502 0.0201933523461452 * df.mm.exp4 -0.0934886126236904 0.161297770710987 -0.57960263313994 0.562344382227341 df.mm.exp5 0.0328066041531677 0.161297770710987 0.203391553451476 0.838880274517005 df.mm.exp6 -0.298629056704788 0.161297770710987 -1.85141465618809 0.0644750636849426 . df.mm.exp7 -0.270301530380617 0.161297770710987 -1.67579210294817 0.0941662780383296 . df.mm.exp8 -0.0335300668880689 0.161297770710987 -0.207876815285612 0.835377600874313 df.mm.trans1:exp2 0.165147389752512 0.150030212477868 1.10076088692385 0.271328960351869 df.mm.trans2:exp2 -0.00327659799835132 0.114693714630204 -0.0285682437692053 0.977216002713894 df.mm.trans1:exp3 0.270704844910793 0.150030212477868 1.80433554308754 0.0715514467683178 . df.mm.trans2:exp3 0.153197222293390 0.114693714630204 1.33570721627885 0.182021564438479 df.mm.trans1:exp4 0.0111302891772452 0.150030212477868 0.074186985363945 0.940879986130853 df.mm.trans2:exp4 0.0820927482458885 0.114693714630204 0.71575629502081 0.474348886984178 df.mm.trans1:exp5 0.0313514101469684 0.150030212477868 0.208967311511294 0.834526491429157 df.mm.trans2:exp5 -0.0212509820646657 0.114693714630204 -0.185284626391108 0.853052352236856 df.mm.trans1:exp6 0.261066233196904 0.150030212477868 1.74009107155944 0.0822242341464821 . df.mm.trans2:exp6 0.0917872321100046 0.114693714630204 0.800281274400658 0.423783369395293 df.mm.trans1:exp7 0.216657276658321 0.150030212477868 1.44409098061020 0.149101492853985 df.mm.trans2:exp7 0.0717278240237814 0.114693714630204 0.625385830906662 0.531894663724113 df.mm.trans1:exp8 -0.0141424994169956 0.150030212477868 -0.0942643430507826 0.924922572951971 df.mm.trans2:exp8 0.00458167850990822 0.114693714630204 0.0399470757807479 0.968145200286222 df.mm.trans1:probe2 -0.0632690892490973 0.0982178293157342 -0.644171121372581 0.51964751607121 df.mm.trans1:probe3 0.0248880627973926 0.0982178293157341 0.253396587674389 0.800026303078424 df.mm.trans1:probe4 -0.071457012189492 0.0982178293157342 -0.727536056206088 0.467108650836601 df.mm.trans1:probe5 -0.0517808433722422 0.0982178293157342 -0.527204110831913 0.59819675044782 df.mm.trans1:probe6 -0.0365938846767469 0.0982178293157342 -0.372578837586718 0.70955975284867 df.mm.trans1:probe7 0.0572337516865657 0.0982178293157341 0.582722628725385 0.560242819370947 df.mm.trans1:probe8 0.0273988477017497 0.0982178293157341 0.278960020727729 0.780346976251102 df.mm.trans1:probe9 -0.0712236945120593 0.0982178293157341 -0.72516054374508 0.468563759275769 df.mm.trans1:probe10 -0.0233738845355647 0.0982178293157342 -0.237980056150765 0.811956972039963 df.mm.trans1:probe11 -0.0841937009657595 0.0982178293157341 -0.857214026743635 0.391581099195488 df.mm.trans1:probe12 -0.0175588178659305 0.0982178293157342 -0.178774240769315 0.858159843270154 df.mm.trans1:probe13 -0.0240221481670159 0.0982178293157342 -0.244580320440533 0.806843576073494 df.mm.trans1:probe14 -0.0121973982743769 0.0982178293157341 -0.124187210808404 0.90119797338873 df.mm.trans1:probe15 0.113426291774658 0.0982178293157341 1.15484421275525 0.24849606777057 df.mm.trans1:probe16 0.00713665425334094 0.0982178293157341 0.07266149438509 0.942093495154735 df.mm.trans1:probe17 0.026475869579808 0.0982178293157342 0.269562764360204 0.787565559575177 df.mm.trans1:probe18 -0.0439144236895574 0.0982178293157342 -0.447112545609094 0.654913773937625 df.mm.trans1:probe19 -0.0468868081345787 0.0982178293157341 -0.477375731689762 0.633223850506936 df.mm.trans1:probe20 -0.0864542272058627 0.0982178293157342 -0.880229463511601 0.37899706515579 df.mm.trans1:probe21 0.0736098359149522 0.0982178293157341 0.749454925116739 0.453801465209392 df.mm.trans1:probe22 -0.0532915909930721 0.0982178293157342 -0.542585713452893 0.587564883402058 df.mm.trans2:probe2 -0.0259785596047723 0.0982178293157341 -0.264499427301135 0.791462642181018 df.mm.trans2:probe3 0.0388600091856743 0.0982178293157341 0.395651272853462 0.692466877737193 df.mm.trans2:probe4 -0.0401748269184371 0.0982178293157341 -0.409038024952576 0.682620285918134 df.mm.trans2:probe5 0.136759038762416 0.0982178293157341 1.39240542898567 0.164183198008359 df.mm.trans2:probe6 -0.083340637717977 0.0982178293157342 -0.848528605229785 0.396395263822288 df.mm.trans3:probe2 0.0114604491438441 0.0982178293157342 0.116683999470228 0.907139501522812 df.mm.trans3:probe3 0.0606054478273631 0.0982178293157342 0.617051387203223 0.537374880458986 df.mm.trans3:probe4 0.198093649683741 0.0982178293157341 2.01688075437855 0.0440386862387246 * df.mm.trans3:probe5 0.0513230779101739 0.0982178293157341 0.522543394287295 0.60143545694919 df.mm.trans3:probe6 -0.0267584048883085 0.0982178293157342 -0.272439383711995 0.785353885595315 df.mm.trans3:probe7 0.241750041747874 0.0982178293157341 2.46136616368029 0.0140491255470712 * df.mm.trans3:probe8 0.142183762533491 0.0982178293157341 1.44763698733784 0.14810695968584