fitVsDatCorrelation=0.879371514262508 cont.fitVsDatCorrelation=0.286388605901578 fstatistic=9242.69289445055,46,554 cont.fstatistic=2273.51642159053,46,554 residuals=-0.419495450481174,-0.0777826357811284,-0.00744203727108005,0.0697209731623168,1.87399033028693 cont.residuals=-0.553807348986985,-0.207280248425949,-0.0874478586055525,0.182042641799485,2.00962808247743 predictedValues: Include Exclude Both Lung 56.1814234586427 45.5128708161056 57.063128072181 cerebhem 54.2319701301755 42.9922096172228 54.6142964940022 cortex 55.2057525227498 45.6468526033872 55.5191956972291 heart 61.7460454477619 48.7077659378961 53.1822881169002 kidney 60.7982486369894 44.0376655794123 56.6478658342949 liver 69.1000994608556 47.2274085333719 66.5757427581451 stomach 61.0879936045828 45.6281193623362 53.4583885197092 testicle 61.1891434017006 43.2823507486422 53.6820205578045 diffExp=10.6685526425372,11.2397605129528,9.55889991936257,13.0382795098658,16.7605830575771,21.8726909274837,15.4598742422467,17.9067926530584 diffExpScore=0.991489755235045 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,1,0,1 diffExp1.4Score=0.666666666666667 diffExp1.3=0,0,0,0,1,1,1,1 diffExp1.3Score=0.8 diffExp1.2=1,1,1,1,1,1,1,1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 59.0527879713685 61.2219879769312 56.0690541521224 cerebhem 58.2956580754843 58.4803992389441 57.4662106757859 cortex 54.7105757952115 54.2398698485314 53.93457823138 heart 55.9037382339731 62.0161994681583 60.7192403599563 kidney 56.3111861478012 53.527149590278 64.5391631210299 liver 58.2708984499793 57.2363209800192 56.6433342893059 stomach 60.2248873091761 58.270292429393 54.1060025778502 testicle 59.7833302587607 56.9177141990207 55.2371373149595 cont.diffExp=-2.16920000556265,-0.184741163459734,0.470705946680042,-6.11246123418518,2.78403655752319,1.03457746996006,1.95459487978315,2.86561605974006 cont.diffExpScore=10.6966273208728 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.480639761656366 cont.tran.correlation=0.319123993174164 tran.covariance=0.00159942848028215 cont.tran.covariance=0.00060175364104615 tran.mean=52.6609949913645 cont.tran.mean=57.7789372483144 weightedLogRatios: wLogRatio Lung 0.826209694666806 cerebhem 0.900473313047846 cortex 0.744559049995775 heart 0.949817555653695 kidney 1.27274464029260 liver 1.53955417155244 stomach 1.15736623778700 testicle 1.36442267230057 cont.weightedLogRatios: wLogRatio Lung -0.147778689919599 cerebhem -0.0128684459611118 cortex 0.0345435965122355 heart -0.422893130150836 kidney 0.203097794989616 liver 0.0726622845069116 stomach 0.134665000479106 testicle 0.199731125139543 varWeightedLogRatios=0.0799532015403265 cont.varWeightedLogRatios=0.0437320204583206 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.61835042327165 0.07460441614755 48.5004857636766 1.52317923146310e-201 *** df.mm.trans1 0.250935760225076 0.0635074964690454 3.95127778887309 8.77840634043996e-05 *** df.mm.trans2 0.211722276777309 0.0588944293857968 3.59494571872648 0.000353411924034430 *** df.mm.exp2 -0.0484293269048058 0.0780023939724261 -0.620869750765926 0.534940670899561 df.mm.exp3 0.0128498344411043 0.078002393972426 0.164736411111264 0.86921154567126 df.mm.exp4 0.232719848748071 0.0780023939724261 2.9834962351327 0.00297531927382242 ** df.mm.exp5 0.0533288181162776 0.0780023939724261 0.683681812831659 0.494461957420522 df.mm.exp6 0.0897671403047601 0.078002393972426 1.15082545205591 0.250300519231620 df.mm.exp7 0.151512800594148 0.0780023939724261 1.94241218606326 0.0525936052769951 . df.mm.exp8 0.0962134387778903 0.0780023939724261 1.23346776782135 0.217924364774185 df.mm.trans1:exp2 0.0131137574371282 0.0692369033893379 0.189404158695341 0.84984543598869 df.mm.trans2:exp2 -0.00854690654223531 0.0591871955448089 -0.144404654817015 0.885233456741559 df.mm.trans1:exp3 -0.0303688330367321 0.0692369033893379 -0.438622057748018 0.661106407849756 df.mm.trans2:exp3 -0.00991033706814435 0.0591871955448089 -0.167440558332275 0.867084516087598 df.mm.trans1:exp4 -0.138276075440110 0.0692369033893379 -1.99714413370780 0.0462981929786784 * df.mm.trans2:exp4 -0.164876527563367 0.0591871955448089 -2.78567899772416 0.00552447616480001 ** df.mm.trans1:exp5 0.0256460063106881 0.0692369033893379 0.370409493423956 0.711218976664007 df.mm.trans2:exp5 -0.0862786755265793 0.0591871955448089 -1.45772535313420 0.145482876856687 df.mm.trans1:exp6 0.117202871025852 0.0692369033893379 1.69278037128247 0.0910594975952719 . df.mm.trans2:exp6 -0.0527878880162042 0.059187195544809 -0.891880203653846 0.372844350861442 df.mm.trans1:exp7 -0.067783616560291 0.0692369033893379 -0.979009938950119 0.328002387376057 df.mm.trans2:exp7 -0.148983782477673 0.059187195544809 -2.51716238801822 0.0121115278193885 * df.mm.trans1:exp8 -0.0108298192106840 0.0692369033893379 -0.156416862692212 0.875761428413932 df.mm.trans2:exp8 -0.146463651854511 0.059187195544809 -2.47458340450727 0.0136374613683467 * df.mm.trans1:probe2 -0.00865700885304493 0.0439992842183551 -0.196753401943605 0.844092675425548 df.mm.trans1:probe3 -0.0712192706157453 0.0439992842183551 -1.61864611847560 0.106092555582639 df.mm.trans1:probe4 0.115961759529168 0.0439992842183551 2.63553740905614 0.00863573038248771 ** df.mm.trans1:probe5 -0.0557768625354573 0.0439992842183551 -1.26767658897935 0.205446012037174 df.mm.trans1:probe6 0.0134478619174066 0.0439992842183551 0.30563819744587 0.759994942035016 df.mm.trans1:probe7 0.256708607393118 0.0439992842183551 5.83438144400603 9.1897048324469e-09 *** df.mm.trans1:probe8 0.651701391675583 0.0439992842183551 14.8116362175663 4.6589078245341e-42 *** df.mm.trans1:probe9 0.523605376199559 0.0439992842183551 11.9003157778900 3.07741401853101e-29 *** df.mm.trans1:probe10 0.61173499972379 0.0439992842183551 13.9032943510611 6.53502113881358e-38 *** df.mm.trans1:probe11 0.503795179459934 0.0439992842183551 11.4500767094244 2.15489982318704e-27 *** df.mm.trans1:probe12 0.485397497202257 0.0439992842183551 11.0319407650674 1.01961694343732e-25 *** df.mm.trans2:probe2 -0.0090425518473857 0.0439992842183551 -0.205515885270094 0.837244581772385 df.mm.trans2:probe3 -0.0815255742719147 0.0439992842183551 -1.85288410300786 0.0644305475572197 . df.mm.trans2:probe4 -0.0248164284628361 0.0439992842183551 -0.564018913118671 0.572969510621857 df.mm.trans2:probe5 -0.0459248344426379 0.0439992842183551 -1.04376321702705 0.297050184645230 df.mm.trans2:probe6 0.00430138183723579 0.0439992842183551 0.0977602684600355 0.922158015522266 df.mm.trans3:probe2 -0.0492256700176325 0.0439992842183551 -1.11878342777897 0.263717403023451 df.mm.trans3:probe3 -0.289491133967852 0.0439992842183551 -6.57945098677506 1.09514325605251e-10 *** df.mm.trans3:probe4 -0.081234179855154 0.0439992842183551 -1.84626139489028 0.065387489890996 . df.mm.trans3:probe5 -0.174343186340378 0.0439992842183551 -3.96240960364641 8.38967107190447e-05 *** df.mm.trans3:probe6 0.352526597828667 0.0439992842183551 8.01209847140206 6.69884741523012e-15 *** df.mm.trans3:probe7 -0.0161844943138461 0.0439992842183551 -0.367835400083495 0.713136461310202 cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.07567706984329 0.150124045145951 27.1487293449954 7.443491786953e-104 *** df.mm.trans1 0.0115871548748405 0.127794073854412 0.0906705180088483 0.927787169730532 df.mm.trans2 0.0491629809473678 0.118511348691102 0.414837747526699 0.678421277713221 df.mm.exp2 -0.0833319972619908 0.156961685633315 -0.530906615367693 0.5956962577885 df.mm.exp3 -0.158652641246892 0.156961685633315 -1.01077304698121 0.312566315347211 df.mm.exp4 -0.121587858277929 0.156961685633315 -0.774633999293151 0.438886437724405 df.mm.exp5 -0.322544141896872 0.156961685633315 -2.05492277045484 0.0403548361383796 * df.mm.exp6 -0.090836956932311 0.156961685633315 -0.578720574806513 0.563012930203353 df.mm.exp7 0.00587882393310684 0.156961685633315 0.0374538786926679 0.97013660568941 df.mm.exp8 -0.0456561463431598 0.156961685633315 -0.290874465057793 0.771256192060098 df.mm.trans1:exp2 0.0704278570266401 0.139323173438281 0.50549994870623 0.613408786673236 df.mm.trans2:exp2 0.037517233950293 0.119100472530444 0.315004912685824 0.752876534101338 df.mm.trans1:exp3 0.0822779184946878 0.139323173438281 0.590554438749821 0.555059823780446 df.mm.trans2:exp3 0.0375624796671827 0.119100472530444 0.315384808045838 0.752588265086827 df.mm.trans1:exp4 0.066787354529066 0.139323173438281 0.479370035011816 0.631864578191589 df.mm.trans2:exp4 0.134477085278133 0.119100472530444 1.12910622788468 0.259341697155727 df.mm.trans1:exp5 0.275005590275453 0.139323173438281 1.97386826246302 0.0488931185586524 * df.mm.trans2:exp5 0.18822673039591 0.119100472530444 1.58040288503302 0.114585371088922 df.mm.trans1:exp6 0.0775080014392156 0.139323173438281 0.556318087841655 0.578218051505835 df.mm.trans2:exp6 0.02351923030911 0.119100472530444 0.197473862272864 0.843529164658368 df.mm.trans1:exp7 0.0137750981333413 0.139323173438281 0.098871550176422 0.921276021772122 df.mm.trans2:exp7 -0.0552928299279705 0.119100472530444 -0.464253657044364 0.64264840022439 df.mm.trans1:exp8 0.0579512549555477 0.139323173438281 0.415948427855899 0.677608817151447 df.mm.trans2:exp8 -0.0272436450366534 0.119100472530444 -0.228745062532723 0.819151481009512 df.mm.trans1:probe2 0.0243364046219155 0.0885383315288202 0.274868570501509 0.783519689296017 df.mm.trans1:probe3 0.0127724153126826 0.0885383315288202 0.144258595030391 0.885348733865683 df.mm.trans1:probe4 0.0270385817142193 0.0885383315288202 0.305388426089981 0.760185042711977 df.mm.trans1:probe5 -0.0215585168251086 0.0885383315288202 -0.24349359709914 0.807713180034213 df.mm.trans1:probe6 -0.000382602808117527 0.0885383315288202 -0.00432132390017972 0.99655364869087 df.mm.trans1:probe7 -0.0369582686689133 0.0885383315288202 -0.417426757775336 0.676528004759632 df.mm.trans1:probe8 -0.00878980121896552 0.0885383315288202 -0.0992767885636556 0.920954419301068 df.mm.trans1:probe9 -0.0481541818445877 0.0885383315288202 -0.543879481497943 0.586743212232405 df.mm.trans1:probe10 -0.160868706451338 0.0885383315288202 -1.81693853581342 0.0697667033764847 . df.mm.trans1:probe11 0.0794975015870643 0.0885383315288202 0.897887956711574 0.369635329479866 df.mm.trans1:probe12 -0.0347497449484942 0.0885383315288202 -0.392482491463968 0.694852701797288 df.mm.trans2:probe2 -0.212165502772257 0.0885383315288202 -2.39631241190936 0.0168915404065412 * df.mm.trans2:probe3 -0.0428094716521406 0.0885383315288202 -0.483513421960133 0.628922275773526 df.mm.trans2:probe4 0.178479827114396 0.0885383315288202 2.01584809689235 0.0442981232804964 * df.mm.trans2:probe5 -0.0998727466028502 0.0885383315288202 -1.12801703938074 0.259800996724365 df.mm.trans2:probe6 0.042030507230495 0.0885383315288202 0.474715374739286 0.635176931017807 df.mm.trans3:probe2 -0.117561804876560 0.0885383315288202 -1.32780687016101 0.18478874205479 df.mm.trans3:probe3 -0.176827026565050 0.0885383315288202 -1.99718046987921 0.0462942347345119 * df.mm.trans3:probe4 -0.104899773795917 0.0885383315288202 -1.18479501459513 0.236606513758948 df.mm.trans3:probe5 -0.127456581489696 0.0885383315288202 -1.43956385092040 0.150555626057150 df.mm.trans3:probe6 -0.0838187546611567 0.0885383315288202 -0.946694535731936 0.344207188182526 df.mm.trans3:probe7 -0.158338211697505 0.0885383315288202 -1.78835775379350 0.0742646468844472 .