fitVsDatCorrelation=0.861640523791348 cont.fitVsDatCorrelation=0.232125977628638 fstatistic=8031.59722778807,54,738 cont.fstatistic=2176.6148473979,54,738 residuals=-0.620006266846733,-0.107078146350640,-0.00337683046605039,0.0901784013643728,1.19593292169364 cont.residuals=-0.776232305634957,-0.242960133300280,-0.084896581089829,0.211311363781285,1.16426267043937 predictedValues: Include Exclude Both Lung 86.186321363192 60.0641772849787 56.1628132223245 cerebhem 84.6302980450498 62.2266096653631 64.076785896408 cortex 76.1385426862035 61.2792063909598 60.7253821720059 heart 76.9420340175866 55.8446426261968 57.1612677432162 kidney 88.2754191657079 52.3034835827886 51.8187388947558 liver 82.1411074033245 52.6586270632384 51.2059893669322 stomach 78.637112747397 52.8560480806074 55.2630476739377 testicle 79.0195030438051 60.9831159116324 60.704896017709 diffExp=26.1221440782133,22.4036883796867,14.8593362952437,21.0973913913898,35.9719355829192,29.4824803400861,25.7810646667896,18.0363871321727 diffExpScore=0.994865328552707 diffExp1.5=0,0,0,0,1,1,0,0 diffExp1.5Score=0.666666666666667 diffExp1.4=1,0,0,0,1,1,1,0 diffExp1.4Score=0.8 diffExp1.3=1,1,0,1,1,1,1,0 diffExp1.3Score=0.857142857142857 diffExp1.2=1,1,1,1,1,1,1,1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 69.7151622772966 81.7129456718203 62.9645751810175 cerebhem 71.4905214918525 71.1387003497716 68.0770296357202 cortex 66.8265047932157 71.6319671582968 71.0844207480201 heart 66.6992157567092 73.2831758326894 78.1560180816008 kidney 66.0144027451087 71.2576069251828 78.2765333290786 liver 70.5076169147915 74.5578947257231 65.0476560786037 stomach 66.7742957276114 75.3628529422888 69.8657827827548 testicle 69.9276538802685 74.5160552751269 68.776256428027 cont.diffExp=-11.9977833945238,0.351821142080922,-4.80546236508113,-6.58396007598012,-5.24320418007409,-4.05027781093162,-8.58855721467738,-4.58840139485841 cont.diffExpScore=0.993627514102495 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=-0.144230041812863 cont.tran.correlation=0.241062718462778 tran.covariance=-0.000623409038236016 cont.tran.covariance=0.000345544223614583 tran.mean=69.386640567377 cont.tran.mean=71.3385357792346 weightedLogRatios: wLogRatio Lung 1.54404095987825 cerebhem 1.31753650231831 cortex 0.917089165594153 heart 1.34050261530051 kidney 2.20809477851663 liver 1.86119094287378 stomach 1.65511616572779 testicle 1.09861186553736 cont.weightedLogRatios: wLogRatio Lung -0.686598550023402 cerebhem 0.0210512037094912 cortex -0.294211868390549 heart -0.399828178793027 kidney -0.323146940786748 liver -0.239263986238834 stomach -0.51566390333665 testicle -0.2719601933315 varWeightedLogRatios=0.173867101701913 cont.varWeightedLogRatios=0.0431528601535061 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.71552141527379 0.0902722807376782 52.236648689276 4.0252077585657e-250 *** df.mm.trans1 -0.0877565557930809 0.0795218414868553 -1.10355286236155 0.27014684921283 df.mm.trans2 -0.624371643942446 0.071754985938201 -8.70143915128331 2.12015841421381e-17 *** df.mm.exp2 -0.114677332770462 0.095556282962989 -1.20010248635225 0.230484638537660 df.mm.exp3 -0.182036823442918 0.0955562829629889 -1.90502202260656 0.0571656523390127 . df.mm.exp4 -0.203920842440420 0.095556282962989 -2.13403908269855 0.0331686002032427 * df.mm.exp5 -0.0338974125517896 0.095556282962989 -0.354737663507891 0.722887476672649 df.mm.exp6 -0.0872580734240284 0.0955562829629889 -0.91315893333592 0.361457172899239 df.mm.exp7 -0.203358805520041 0.0955562829629889 -2.12815734574781 0.0336547824816799 * df.mm.exp8 -0.149402861329739 0.095556282962989 -1.56350641419995 0.118362208938616 df.mm.trans1:exp2 0.0964581879924554 0.090132720312964 1.07017948262881 0.284888405771145 df.mm.trans2:exp2 0.150046437155586 0.0737449529833342 2.03466720209986 0.042241344136828 * df.mm.trans1:exp3 0.0580799540942132 0.090132720312964 0.644382571529459 0.519527610543031 df.mm.trans2:exp3 0.202063786251215 0.0737449529833342 2.74003546109629 0.00629167600242043 ** df.mm.trans1:exp4 0.0904616956316418 0.090132720312964 1.00364989892167 0.315876350313147 df.mm.trans2:exp4 0.131080827024073 0.0737449529833342 1.77748878697768 0.0758996037301621 . df.mm.trans1:exp5 0.0578476225667651 0.090132720312964 0.641804911311933 0.521199149691648 df.mm.trans2:exp5 -0.104453222895038 0.0737449529833342 -1.41641181761474 0.157076905318348 df.mm.trans1:exp6 0.0391851835661652 0.090132720312964 0.434749815939252 0.6638711271178 df.mm.trans2:exp6 -0.0443254565684381 0.0737449529833342 -0.6010642732182 0.547981739191008 df.mm.trans1:exp7 0.111691085679546 0.090132720312964 1.23918467446367 0.215671056778335 df.mm.trans2:exp7 0.0755173378989793 0.0737449529833342 1.02403398258381 0.306154764743662 df.mm.trans1:exp8 0.0625860771045054 0.090132720312964 0.694376879863278 0.487664415137932 df.mm.trans2:exp8 0.164586286855181 0.0737449529833342 2.23183119924663 0.025925574467968 * df.mm.trans1:probe2 -0.455752257465273 0.0526261706985362 -8.66018278388532 2.94657163141932e-17 *** df.mm.trans1:probe3 0.269219728807808 0.0526261706985362 5.11570051999424 3.98890370586575e-07 *** df.mm.trans1:probe4 -0.482100219712843 0.0526261706985362 -9.16084551305292 4.99700013591442e-19 *** df.mm.trans1:probe5 -0.663824554285725 0.0526261706985362 -12.6139627009607 3.57292309433426e-33 *** df.mm.trans1:probe6 0.521863893335394 0.0526261706985362 9.91643295357435 7.63229617501504e-22 *** df.mm.trans1:probe7 -0.200938350313169 0.0526261706985362 -3.81822100384663 0.000145704504761789 *** df.mm.trans1:probe8 -0.625484867666763 0.0526261706985362 -11.8854337939538 6.23244701253232e-30 *** df.mm.trans1:probe9 -0.326528099263393 0.0526261706985362 -6.20467145774061 9.13136513940085e-10 *** df.mm.trans1:probe10 -0.0946831278112842 0.0526261706985362 -1.79916430465114 0.0724011083967712 . df.mm.trans1:probe11 -0.456242736037717 0.0526261706985362 -8.66950283445964 2.73571594256229e-17 *** df.mm.trans1:probe12 -0.488664832729757 0.0526261706985362 -9.28558597829632 1.76018150976789e-19 *** df.mm.trans1:probe13 -0.485523040065328 0.0526261706985362 -9.22588578307547 2.90417930651448e-19 *** df.mm.trans1:probe14 -0.446016245493756 0.0526261706985362 -8.47517954609914 1.26970979533477e-16 *** df.mm.trans1:probe15 -0.328219860856592 0.0526261706985362 -6.23681823130866 7.51596250625733e-10 *** df.mm.trans1:probe16 -0.306590579386494 0.0526261706985362 -5.82581965050749 8.48580972795783e-09 *** df.mm.trans1:probe17 -0.0823701232001647 0.0526261706985362 -1.56519317493218 0.117966290132537 df.mm.trans1:probe18 -0.102638062199733 0.0526261706985362 -1.95032359066527 0.0515157853386713 . df.mm.trans1:probe19 -0.0138775659803114 0.0526261706985362 -0.263700850662453 0.792084052886853 df.mm.trans1:probe20 -0.102797954634989 0.0526261706985362 -1.95336185913767 0.0511542375314159 . df.mm.trans1:probe21 0.149375919151365 0.0526261706985362 2.83843413207945 0.00465807557021854 ** df.mm.trans1:probe22 0.097951695124391 0.0526261706985362 1.86127346573433 0.0631029707904893 . df.mm.trans2:probe2 0.0156470281875803 0.0526261706985362 0.297324087614368 0.766302763093191 df.mm.trans2:probe3 -0.0202420973990168 0.0526261706985362 -0.384639374864868 0.700615430253523 df.mm.trans2:probe4 0.00073768765572093 0.0526261706985362 0.0140175058517311 0.988819803224779 df.mm.trans2:probe5 0.0651013649092618 0.0526261706985362 1.23705304879940 0.216460871560448 df.mm.trans2:probe6 -0.0143417359872107 0.0526261706985362 -0.272520987121899 0.785297687270162 df.mm.trans3:probe2 -0.066339456607156 0.0526261706985362 -1.26057920853058 0.207858893018165 df.mm.trans3:probe3 0.372860216991724 0.0526261706985362 7.08507216167439 3.24946224609075e-12 *** df.mm.trans3:probe4 -0.106973577865010 0.0526261706985362 -2.03270685374008 0.0424396449489539 * df.mm.trans3:probe5 -0.0752390029456336 0.0526261706985362 -1.42968796602422 0.153229774809433 cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.43341816032533 0.173011349332241 25.6250134886333 4.33311118486051e-104 *** df.mm.trans1 -0.286541842696907 0.152407593832765 -1.88010213592982 0.0604878218610983 . df.mm.trans2 -0.00715282754560116 0.137522025997761 -0.0520122321766669 0.958533021507878 df.mm.exp2 -0.191501484916228 0.183138404364030 -1.04566535665329 0.296057927041326 df.mm.exp3 -0.295284976031693 0.183138404364030 -1.61235966348568 0.107311221940919 df.mm.exp4 -0.369240811777123 0.183138404364030 -2.01618449750807 0.0441425389022996 * df.mm.exp5 -0.409131340989068 0.183138404364030 -2.23400079524459 0.0257818027409231 * df.mm.exp6 -0.112881496276013 0.183138404364030 -0.616372609928581 0.537838699114056 df.mm.exp7 -0.228001317538378 0.183138404364030 -1.24496726030861 0.213538959216266 df.mm.exp8 -0.177440778403372 0.183138404364030 -0.968888961436328 0.332918009397927 df.mm.trans1:exp2 0.216648528912419 0.172743874785283 1.25416041050201 0.210180797812147 df.mm.trans2:exp2 0.0529205392911287 0.141335897551595 0.374430984681792 0.708191254016864 df.mm.trans1:exp3 0.252966925851602 0.172743874785283 1.46440460575539 0.143509262338209 df.mm.trans2:exp3 0.163613975983160 0.141335897551595 1.15762505363106 0.247391595762986 df.mm.trans1:exp4 0.325016176490570 0.172743874785283 1.88149175705684 0.0602984348804053 . df.mm.trans2:exp4 0.260359426463166 0.141335897551595 1.84213233137123 0.0658568136159304 . df.mm.trans1:exp5 0.354586452250435 0.172743874785283 2.05267163707644 0.040456549122421 * df.mm.trans2:exp5 0.27222047523225 0.141335897551595 1.92605332366376 0.0544815283739819 . df.mm.trans1:exp6 0.124184411234218 0.172743874785283 0.718893282836084 0.472434227911354 df.mm.trans2:exp6 0.0212449872110239 0.141335897551595 0.150315578554757 0.880556715116434 df.mm.trans1:exp7 0.184901699163210 0.172743874785283 1.07038063950481 0.284797948840645 df.mm.trans2:exp7 0.147103361535417 0.141335897551595 1.04080678782767 0.298306075985538 df.mm.trans1:exp8 0.180484139642106 0.172743874785283 1.04480775290263 0.296453927998369 df.mm.trans2:exp8 0.0852429445503226 0.141335897551595 0.603123099134841 0.546612101546708 df.mm.trans1:probe2 -0.000821595117911979 0.100860693098035 -0.00814584049222625 0.99350283292112 df.mm.trans1:probe3 0.147890069325672 0.100860693098035 1.46628051804011 0.142997831581484 df.mm.trans1:probe4 0.0326966028078044 0.100860693098035 0.324175868750216 0.745896745221559 df.mm.trans1:probe5 0.302866431191103 0.100860693098035 3.00281925384670 0.00276526510086138 ** df.mm.trans1:probe6 0.0424530216878432 0.100860693098035 0.420907495118832 0.673945175700031 df.mm.trans1:probe7 0.174769733279204 0.100860693098035 1.73278338578668 0.0835519213099486 . df.mm.trans1:probe8 0.232317353493204 0.100860693098035 2.30334877103606 0.0215363668872957 * df.mm.trans1:probe9 0.132417197427242 0.100860693098035 1.31287217408406 0.189634117516432 df.mm.trans1:probe10 0.0431547866277579 0.100860693098035 0.427865259520000 0.66887404638678 df.mm.trans1:probe11 0.117399136874048 0.100860693098035 1.16397313232755 0.244811058439863 df.mm.trans1:probe12 0.0931537011362992 0.100860693098035 0.923587755298839 0.356002855888443 df.mm.trans1:probe13 0.0575387447990455 0.100860693098035 0.570477388481941 0.568527596881071 df.mm.trans1:probe14 0.174109267366321 0.100860693098035 1.72623508741001 0.084723647297341 . df.mm.trans1:probe15 0.155139836215871 0.100860693098035 1.53815952925366 0.124438231566643 df.mm.trans1:probe16 0.0307149133436439 0.100860693098035 0.304528081259461 0.76081145417508 df.mm.trans1:probe17 0.127223893361958 0.100860693098035 1.26138230319613 0.207569702587776 df.mm.trans1:probe18 0.110945357801701 0.100860693098035 1.09998607380046 0.271696864092733 df.mm.trans1:probe19 0.114322138595888 0.100860693098035 1.13346572469781 0.257386800123963 df.mm.trans1:probe20 0.208577542665973 0.100860693098035 2.06797649569232 0.0389901392053289 * df.mm.trans1:probe21 0.167169123159826 0.100860693098035 1.65742588143173 0.0978583969285798 . df.mm.trans1:probe22 0.169583587940537 0.100860693098035 1.68136449127614 0.0931152312481932 . df.mm.trans2:probe2 -0.100172057417368 0.100860693098035 -0.993172407808088 0.320951459969781 df.mm.trans2:probe3 0.00414421614233774 0.100860693098035 0.0410885154071827 0.967236443379672 df.mm.trans2:probe4 -0.0622772114233885 0.100860693098035 -0.617457698440125 0.53712333918179 df.mm.trans2:probe5 -0.0898076188589306 0.100860693098035 -0.89041246991669 0.37353462287223 df.mm.trans2:probe6 -0.00546911526131111 0.100860693098035 -0.054224446544257 0.956771018926083 df.mm.trans3:probe2 -0.0372356786253381 0.100860693098035 -0.369179285622652 0.712099989251076 df.mm.trans3:probe3 0.077154656517362 0.100860693098035 0.764962585001958 0.444538365663572 df.mm.trans3:probe4 -0.0575593657404866 0.100860693098035 -0.570681838211639 0.568389047494617 df.mm.trans3:probe5 0.0318842850759447 0.100860693098035 0.31612201043427 0.751999285888129