fitVsDatCorrelation=0.837524553326914 cont.fitVsDatCorrelation=0.250880773196561 fstatistic=7702.43536275376,77,1267 cont.fstatistic=2442.83054198248,77,1267 residuals=-0.724113692168163,-0.110300379530957,-0.0147050158462170,0.090014816348489,1.19628181956561 cont.residuals=-0.76146850770741,-0.280359869829697,-0.0549323432687801,0.235545965241361,1.52709761654090 predictedValues: Include Exclude Both Lung 86.5362465310709 86.6012870533558 64.0756042902671 cerebhem 85.9382488968878 85.7480957904882 65.0639180319025 cortex 74.4714877502333 77.8470197342467 59.0221749665618 heart 80.7526452638093 87.771378108618 60.3343181186725 kidney 88.2676972463381 89.83460061488 64.4716723217262 liver 89.2280613713566 86.4398649433182 60.5088207362394 stomach 92.4721833237946 89.7019542189348 64.4179139669642 testicle 83.3046269456497 89.61745486432 61.9472800791511 diffExp=-0.0650405222849457,0.190153106399606,-3.37553198401335,-7.01873284480872,-1.56690336854187,2.78819642803848,2.77022910485982,-6.31282791867031 diffExpScore=1.77239172361607 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,0 diffExp1.3Score=0 diffExp1.2=0,0,0,0,0,0,0,0 diffExp1.2Score=0 cont.predictedValues: Include Exclude Both Lung 70.4510173761946 70.0972088524276 76.4320678870164 cerebhem 66.3594963757209 68.621809725943 74.9872932525786 cortex 69.032816343755 79.0807397248989 72.6245469217555 heart 67.5212018687207 71.3827406376222 79.254077946486 kidney 66.3731931414107 79.9378441776667 72.9625068050235 liver 66.774045245785 69.5733410662492 73.4465481357982 stomach 66.1320519890146 73.1537385481397 73.4320330974157 testicle 72.0252282347241 63.8905839180933 68.8385689095465 cont.diffExp=0.353808523767015,-2.2623133502221,-10.0479233811439,-3.86153876890148,-13.5646510362561,-2.79929582046427,-7.02168655912509,8.13464431663083 cont.diffExpScore=1.49820473242328 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,-1,0,0,0 cont.diffExp1.2Score=0.5 tran.correlation=0.742893532005417 cont.tran.correlation=-0.439065632039337 tran.covariance=0.00240893202554642 cont.tran.covariance=-0.00107221444997748 tran.mean=85.9083032910814 cont.tran.mean=70.0254410766479 weightedLogRatios: wLogRatio Lung -0.0033515761873435 cerebhem 0.00986288258407312 cortex -0.192060186658459 heart -0.369472479887484 kidney -0.0789914631318685 liver 0.142076312091009 stomach 0.13722482152428 testicle -0.325714167520525 cont.weightedLogRatios: wLogRatio Lung 0.0214095716607153 cerebhem -0.141196052115806 cortex -0.584658862032889 heart -0.2358191604624 kidney -0.797430329382725 liver -0.173378640783457 stomach -0.428069898255897 testicle 0.505395362042226 varWeightedLogRatios=0.0381398314413405 cont.varWeightedLogRatios=0.157446568448173 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 5.1951634527765 0.0911041828468483 57.024422923697 0 *** df.mm.trans1 -0.651415749575783 0.078389359282658 -8.310002218884 2.43637548126117e-16 *** df.mm.trans2 -0.6961277754296 0.0671864564591927 -10.3611324680058 3.3408822747016e-24 *** df.mm.exp2 -0.0321415950476969 0.0836029318659502 -0.38445535736992 0.700705494751158 df.mm.exp3 -0.174565602947124 0.0836029318659502 -2.08803207077742 0.0369942390365175 * df.mm.exp4 0.00441077769609654 0.0836029318659502 0.0527586485025289 0.957932526113179 df.mm.exp5 0.0503041456449273 0.0836029318659502 0.601703128373362 0.547479414175463 df.mm.exp6 0.0860410614550109 0.0836029318659502 1.02916320677569 0.30359941361839 df.mm.exp7 0.0961943363175558 0.0836029318659502 1.15060960388082 0.250109988178812 df.mm.exp8 0.0299561654198372 0.0836029318659502 0.358314771399037 0.720167454841139 df.mm.trans1:exp2 0.0252072360986772 0.0778300939292659 0.323875185369637 0.746085985185112 df.mm.trans2:exp2 0.0222407968163191 0.0482681752178483 0.460775587971577 0.645038695450358 df.mm.trans1:exp3 0.0244185791082320 0.0778300939292659 0.313742125641326 0.753768548488746 df.mm.trans2:exp3 0.067996540833584 0.0482681752178483 1.40872408220729 0.159162123556498 df.mm.trans1:exp4 -0.0735834186533917 0.0778300939292659 -0.945436590636346 0.344616290036342 df.mm.trans2:exp4 0.00901000264158332 0.0482681752178483 0.186665491308063 0.851952797969372 df.mm.trans1:exp5 -0.0304932957752309 0.0778300939292659 -0.391793125714894 0.695276961376387 df.mm.trans2:exp5 -0.0136486145392227 0.0482681752178483 -0.282766325381527 0.777402157737877 df.mm.trans1:exp6 -0.0554088431853718 0.0778300939292659 -0.711920548826895 0.476645038693103 df.mm.trans2:exp6 -0.0879067697561768 0.0482681752178483 -1.8212159328466 0.0688097787689187 . df.mm.trans1:exp7 -0.0298498190570434 0.0778300939292659 -0.383525414785851 0.701394573764888 df.mm.trans2:exp7 -0.0610164588317914 0.0482681752178483 -1.26411364333552 0.206421747789151 df.mm.trans1:exp8 -0.0680154334320663 0.0778300939292659 -0.873896329790897 0.382340319267324 df.mm.trans2:exp8 0.0042792668359193 0.0482681752178483 0.0886560723832158 0.929369254942706 df.mm.trans1:probe2 -0.525203296374791 0.0591162000494903 -8.8842533169437 2.15915418623046e-18 *** df.mm.trans1:probe3 -0.280252070065197 0.0591162000494903 -4.74069831671485 2.37070567620146e-06 *** df.mm.trans1:probe4 -0.0236873532890050 0.0591162000494903 -0.400691405556762 0.688714895513894 df.mm.trans1:probe5 -0.485535195086976 0.0591162000494903 -8.2132341842084 5.25877965881261e-16 *** df.mm.trans1:probe6 -0.6209740987933 0.0591162000494903 -10.5042965933778 8.33942619729626e-25 *** df.mm.trans1:probe7 -0.339706210575368 0.0591162000494903 -5.74641486244001 1.14064123442961e-08 *** df.mm.trans1:probe8 0.141513746260469 0.0591162000494903 2.39382345519499 0.0168184956594652 * df.mm.trans1:probe9 -0.133992028394604 0.0591162000494903 -2.26658730233726 0.0235834581302129 * df.mm.trans1:probe10 -0.525015270001311 0.0591162000494903 -8.88107269347123 2.21807843897144e-18 *** df.mm.trans1:probe11 0.131209542206931 0.0591162000494903 2.21951921972465 0.0266279459787673 * df.mm.trans1:probe12 0.166607231381805 0.0591162000494903 2.81830075753053 0.00490291954047279 ** df.mm.trans1:probe13 0.0063402630118946 0.0591162000494903 0.107250855206978 0.914606951147156 df.mm.trans1:probe14 0.0113757542602536 0.0591162000494903 0.192430404030202 0.8474359162375 df.mm.trans1:probe15 -0.0347242649863772 0.0591162000494903 -0.58739000404808 0.557046465871217 df.mm.trans1:probe16 0.239037971704354 0.0591162000494903 4.04352734959687 5.58294672691794e-05 *** df.mm.trans1:probe17 0.0139173649947481 0.0591162000494903 0.235423876756234 0.81391780113371 df.mm.trans1:probe18 -0.0208789049450627 0.0591162000494903 -0.353184151342331 0.724009140609167 df.mm.trans1:probe19 -0.0233288631656774 0.0591162000494903 -0.394627245089286 0.693184420851441 df.mm.trans1:probe20 0.238063355113502 0.0591162000494903 4.02704089427606 5.98371207866849e-05 *** df.mm.trans1:probe21 0.195380898041456 0.0591162000494903 3.30503141064359 0.000976223584762101 *** df.mm.trans1:probe22 0.221204330772442 0.0591162000494903 3.74185638771194 0.000190838963713943 *** df.mm.trans1:probe23 0.00236887026584832 0.0591162000494903 0.0400714231270815 0.96804249764806 df.mm.trans1:probe24 -0.492608306878422 0.0591162000494903 -8.33288178986514 2.02881921809070e-16 *** df.mm.trans1:probe25 -0.478741687482639 0.0591162000494903 -8.09831631738594 1.29796691665533e-15 *** df.mm.trans1:probe26 -0.55698207791261 0.0591162000494903 -9.42181800329387 2.02618504297909e-20 *** df.mm.trans1:probe27 -0.300185312109851 0.0591162000494903 -5.07788578864245 4.38729648888155e-07 *** df.mm.trans1:probe28 -0.357743957978912 0.0591162000494903 -6.05153845611558 1.88639121125976e-09 *** df.mm.trans1:probe29 0.200300280155167 0.0591162000494903 3.38824687627895 0.000725009547253665 *** df.mm.trans1:probe30 -0.526977809742169 0.0591162000494903 -8.91427069569761 1.67398174286823e-18 *** df.mm.trans2:probe2 -0.393547213536453 0.0591162000494903 -6.65718048871522 4.14653362442233e-11 *** df.mm.trans2:probe3 0.0385309615680468 0.0591162000494903 0.651783462668268 0.514659082085327 df.mm.trans2:probe4 -0.324416855182007 0.0591162000494903 -5.48778261983034 4.91076935808619e-08 *** df.mm.trans2:probe5 -0.275896114448769 0.0591162000494903 -4.66701368182998 3.38064143211089e-06 *** df.mm.trans2:probe6 -0.0254167742658235 0.0591162000494903 -0.429946008785161 0.667308028822466 df.mm.trans3:probe2 0.447437658450881 0.0591162000494903 7.56878246701072 7.22090380167125e-14 *** df.mm.trans3:probe3 0.140565290156136 0.0591162000494903 2.37777952639816 0.0175648909715915 * df.mm.trans3:probe4 0.137835358369675 0.0591162000494903 2.33160044546645 0.0198778370704294 * df.mm.trans3:probe5 0.0412463975372450 0.0591162000494903 0.697717334718991 0.485482001110075 df.mm.trans3:probe6 0.607104554815458 0.0591162000494903 10.2696816491454 8.04071114355012e-24 *** df.mm.trans3:probe7 0.181450518934704 0.0591162000494903 3.06938738929091 0.00219056592150803 ** df.mm.trans3:probe8 0.192324739233155 0.0591162000494903 3.25333392660805 0.00117067607492921 ** df.mm.trans3:probe9 0.0191849073252525 0.0591162000494903 0.324528763844622 0.74559131998641 df.mm.trans3:probe10 0.128125226671123 0.0591162000494903 2.16734544107809 0.0303943078320934 * df.mm.trans3:probe11 0.680805551300544 0.0591162000494903 11.5163956873174 2.94482104923496e-29 *** df.mm.trans3:probe12 0.36014300210624 0.0591162000494903 6.09212029536301 1.47558289737435e-09 *** df.mm.trans3:probe13 0.133274734422536 0.0591162000494903 2.25445367447438 0.0243378575410996 * df.mm.trans3:probe14 0.184061205186176 0.0591162000494903 3.11354933219803 0.00188992892505397 ** df.mm.trans3:probe15 0.247382055879752 0.0591162000494903 4.18467451684397 3.0526783914238e-05 *** df.mm.trans3:probe16 0.280798269765377 0.0591162000494903 4.7499377417747 2.26673305898028e-06 *** df.mm.trans3:probe17 0.169883980127748 0.0591162000494903 2.87372970497978 0.00412426245725034 ** df.mm.trans3:probe18 0.493727829115085 0.0591162000494903 8.35181944546082 1.74299431382533e-16 *** df.mm.trans3:probe19 0.535941887552023 0.0591162000494903 9.06590557416324 4.5761867588124e-19 *** df.mm.trans3:probe20 1.26758234141162 0.0591162000494903 21.4422161835577 2.87095225157819e-87 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.99832118676341 0.161402888369172 24.7723025725424 8.42073272291843e-111 *** df.mm.trans1 0.162216279905966 0.138876927603851 1.16805780992427 0.243003193653884 df.mm.trans2 0.246844011449657 0.119029530730031 2.07380479395084 0.0382990720487029 * df.mm.exp2 -0.0620197007204667 0.148113448336167 -0.418731056613462 0.675483666232949 df.mm.exp3 0.151350055465716 0.148113448336167 1.02185221643211 0.307045917744155 df.mm.exp4 -0.060559416587244 0.148113448336167 -0.408871829449238 0.682702823014748 df.mm.exp5 0.118198627239974 0.148113448336167 0.798027650883551 0.425003987860295 df.mm.exp6 -0.0212602923772505 0.148113448336167 -0.143540594159936 0.885886079034346 df.mm.exp7 0.0194581952285213 0.148113448336167 0.131373588604579 0.895500637805767 df.mm.exp8 0.0340259502190861 0.148113448336167 0.229728971955731 0.81833946146927 df.mm.trans1:exp2 0.00218889738871365 0.137886116418441 0.0158746757510455 0.987336872590517 df.mm.trans2:exp2 0.0407471343666602 0.08551333926749 0.476500329839782 0.633800134988918 df.mm.trans1:exp3 -0.171685744095393 0.137886116418441 -1.24512712776957 0.213315258774122 df.mm.trans2:exp3 -0.0307636796653025 0.08551333926749 -0.359752992092522 0.719091812808959 df.mm.trans1:exp4 0.0180833875545763 0.137886116418441 0.131147268661182 0.89567962953807 df.mm.trans2:exp4 0.0787325523554953 0.08551333926749 0.920704921944587 0.357379772278093 df.mm.trans1:exp5 -0.177823049373724 0.137886116418441 -1.28963708597091 0.197412049851900 df.mm.trans2:exp5 0.0131677810823628 0.08551333926749 0.153985111506093 0.877645997507003 df.mm.trans1:exp6 -0.0323429261581384 0.137886116418441 -0.234562601357107 0.814586138785915 df.mm.trans2:exp6 0.0137587790932783 0.08551333926749 0.160896290697293 0.87220073364929 df.mm.trans1:exp7 -0.082722343750016 0.137886116418441 -0.599932363741248 0.548658589110399 df.mm.trans2:exp7 0.0232220623114512 0.08551333926749 0.271560700475179 0.78600406039153 df.mm.trans1:exp8 -0.0119271797774253 0.137886116418441 -0.0865002226999424 0.931082446583953 df.mm.trans2:exp8 -0.126736932810026 0.08551333926749 -1.48207208250384 0.138569778022212 df.mm.trans1:probe2 0.210319564254402 0.104732023703427 2.00816862710463 0.0448372988879854 * df.mm.trans1:probe3 0.153276766909031 0.104732023703427 1.46351384694971 0.143574862378130 df.mm.trans1:probe4 0.163597778283088 0.104732023703427 1.56206070023389 0.118523415007126 df.mm.trans1:probe5 0.0686293056939302 0.104732023703427 0.655284823754287 0.512403344881101 df.mm.trans1:probe6 0.128665219733924 0.104732023703427 1.22851841475220 0.219480563956299 df.mm.trans1:probe7 0.276296965675959 0.104732023703427 2.63813259694434 0.00843852600384944 ** df.mm.trans1:probe8 0.0803987596438986 0.104732023703427 0.767661664512146 0.442831252788362 df.mm.trans1:probe9 0.0828483471535133 0.104732023703427 0.791050761972454 0.429062420932468 df.mm.trans1:probe10 0.150187125281874 0.104732023703427 1.43401339887372 0.151815183574042 df.mm.trans1:probe11 0.169762128340870 0.104732023703427 1.62091901156794 0.105283831668365 df.mm.trans1:probe12 0.0927371637339785 0.104732023703427 0.885470942455814 0.376070701547559 df.mm.trans1:probe13 0.358027060835612 0.104732023703427 3.4185060898799 0.000649652193622648 *** df.mm.trans1:probe14 -0.0448265460205371 0.104732023703427 -0.428011838551632 0.66871524333146 df.mm.trans1:probe15 0.114545717090487 0.104732023703427 1.09370289086411 0.274293195840577 df.mm.trans1:probe16 0.0440956734753099 0.104732023703427 0.421033337426735 0.67380214736705 df.mm.trans1:probe17 0.243912336733864 0.104732023703427 2.32891839677 0.0200199976962140 * df.mm.trans1:probe18 0.281440307067397 0.104732023703427 2.68724213583764 0.00729877395995545 ** df.mm.trans1:probe19 0.0783853296324409 0.104732023703427 0.748437076461034 0.454335472215105 df.mm.trans1:probe20 0.192322980074521 0.104732023703427 1.83633403875712 0.0665424491013671 . df.mm.trans1:probe21 0.170159932443643 0.104732023703427 1.62471731593280 0.104471522237686 df.mm.trans1:probe22 0.311578977896605 0.104732023703427 2.97501152826868 0.00298527641760398 ** df.mm.trans1:probe23 0.122346034023966 0.104732023703427 1.16818170505725 0.242953243585249 df.mm.trans1:probe24 0.168227431201289 0.104732023703427 1.60626545017084 0.108464777211676 df.mm.trans1:probe25 0.123087990230296 0.104732023703427 1.17526603495076 0.240109108128936 df.mm.trans1:probe26 0.162403067215801 0.104732023703427 1.55065338635757 0.121234506682731 df.mm.trans1:probe27 0.209398014048687 0.104732023703427 1.99936950174519 0.0457816288494274 * df.mm.trans1:probe28 0.091648166766656 0.104732023703427 0.875073005618402 0.381700035222712 df.mm.trans1:probe29 0.257763361527413 0.104732023703427 2.46117044637015 0.0139809840863736 * df.mm.trans1:probe30 0.257775675100729 0.104732023703427 2.46128801855944 0.0139764252295662 * df.mm.trans2:probe2 -0.0687295260467037 0.104732023703427 -0.65624174551737 0.511787751279133 df.mm.trans2:probe3 -0.00674299733297929 0.104732023703427 -0.0643833384913255 0.948675152635982 df.mm.trans2:probe4 -0.0821992214152892 0.104732023703427 -0.784852793908147 0.432686605483174 df.mm.trans2:probe5 0.195737594840146 0.104732023703427 1.86893738819008 0.0618621037491127 . df.mm.trans2:probe6 0.0845963878078705 0.104732023703427 0.807741365214373 0.419391104548199 df.mm.trans3:probe2 0.0153185177755399 0.104732023703427 0.1462639337412 0.883736303550544 df.mm.trans3:probe3 -0.142823175716984 0.104732023703427 -1.36370109797000 0.172903889326546 df.mm.trans3:probe4 -0.156974760165010 0.104732023703427 -1.49882294463745 0.134168675264823 df.mm.trans3:probe5 -0.0598505282793163 0.104732023703427 -0.571463494764473 0.567786855526221 df.mm.trans3:probe6 -0.0695933001662167 0.104732023703427 -0.664489214524166 0.506498163761984 df.mm.trans3:probe7 -0.102354936983668 0.104732023703427 -0.97730315298317 0.328605653293834 df.mm.trans3:probe8 -0.144040319747552 0.104732023703427 -1.37532260577181 0.169274565993255 df.mm.trans3:probe9 -0.0397575170745808 0.104732023703427 -0.379611848112123 0.70429718092961 df.mm.trans3:probe10 -0.139685358143929 0.104732023703427 -1.33374065738937 0.182528571015599 df.mm.trans3:probe11 -0.128727169467465 0.104732023703427 -1.22910992183236 0.219258814790025 df.mm.trans3:probe12 -0.119854926157029 0.104732023703427 -1.14439616383644 0.252675524679507 df.mm.trans3:probe13 -0.0871952110295501 0.104732023703427 -0.83255539181085 0.405252425601446 df.mm.trans3:probe14 -0.0789710370705339 0.104732023703427 -0.75402951531003 0.45097160699859 df.mm.trans3:probe15 -0.0665482755594177 0.104732023703427 -0.635414777698408 0.525272673090154 df.mm.trans3:probe16 -0.0312875672984521 0.104732023703427 -0.298739260372262 0.765187987439068 df.mm.trans3:probe17 -0.0553560159614193 0.104732023703427 -0.528549091328289 0.597210852672517 df.mm.trans3:probe18 0.102935547180420 0.104732023703427 0.982846922464758 0.325870423461634 df.mm.trans3:probe19 -0.0426209186733328 0.104732023703427 -0.406952116136165 0.68411189423146 df.mm.trans3:probe20 -0.0721957128680575 0.104732023703427 -0.68933751411599 0.490737116899038