fitVsDatCorrelation=0.900977895970366 cont.fitVsDatCorrelation=0.261191469836159 fstatistic=6854.69932471361,58,830 cont.fstatistic=1373.37313785954,58,830 residuals=-0.613666066701688,-0.127475790361349,-0.0105362651982836,0.123427548487852,0.760313015470561 cont.residuals=-1.04961323993979,-0.367121440939939,-0.086415111545853,0.338245274455396,1.43552007490631 predictedValues: Include Exclude Both Lung 109.519782463235 152.274829909291 80.7138311712196 cerebhem 85.4901864422463 96.9128753736539 73.4988996939659 cortex 89.191915855829 127.040824236642 65.7510750899564 heart 96.4361820126294 128.811893346052 71.2380771586758 kidney 106.221432213201 155.600726712372 80.1881631480619 liver 105.539915461452 152.520717053887 75.3543055423039 stomach 103.303176406874 129.342980945858 72.3151318102833 testicle 100.397737635525 114.045311499865 79.1456703636136 diffExp=-42.7550474460558,-11.4226889314076,-37.8489083808133,-32.3757113334229,-49.3792944991714,-46.9808015924347,-26.0398045389840,-13.6475738643397 diffExpScore=0.996175174419673 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,-1,0,-1,-1,0,0 diffExp1.4Score=0.75 diffExp1.3=-1,0,-1,-1,-1,-1,0,0 diffExp1.3Score=0.833333333333333 diffExp1.2=-1,0,-1,-1,-1,-1,-1,0 diffExp1.2Score=0.857142857142857 cont.predictedValues: Include Exclude Both Lung 92.7383073740405 90.1385485806843 105.501095678075 cerebhem 98.1089089824776 116.489122236378 91.7111595780612 cortex 101.259522473630 94.4329211527115 93.9670896422702 heart 106.138103805709 116.909379938862 96.42974113343 kidney 110.180804272980 87.9723887198585 94.4694137443006 liver 93.8985628632147 127.490007509986 96.9492544049265 stomach 101.918411330208 100.220935809073 95.0242885375009 testicle 109.302563776430 100.921392946993 106.284954741945 cont.diffExp=2.59975879335613,-18.3802132539002,6.82660132091887,-10.7712761331535,22.2084155531213,-33.5914446467711,1.69747552113483,8.38117082943745 cont.diffExpScore=4.74165546547778 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,-1,0,0 cont.diffExp1.3Score=0.5 cont.diffExp1.2=0,0,0,0,1,-1,0,0 cont.diffExp1.2Score=2 tran.correlation=0.820851829788797 cont.tran.correlation=-0.306444149209481 tran.covariance=0.0117811664048954 cont.tran.covariance=-0.00249228899165147 tran.mean=115.790655473038 cont.tran.mean=103.007492610827 weightedLogRatios: wLogRatio Lung -1.60206280922619 cerebhem -0.565741499846337 cortex -1.65103199739602 heart -1.36445874770052 kidney -1.85401878372073 liver -1.78331862626174 stomach -1.06781297138199 testicle -0.595585804813432 cont.weightedLogRatios: wLogRatio Lung 0.128394269101391 cerebhem -0.802263889424004 cortex 0.319864859284148 heart -0.455555893038177 kidney 1.03311142926049 liver -1.43587725006323 stomach 0.0775242338800415 testicle 0.371304883091212 varWeightedLogRatios=0.263931014970421 cont.varWeightedLogRatios=0.59571873358868 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 5.01090865458425 0.100837438582941 49.6929387041369 5.92324431931313e-251 *** df.mm.trans1 -0.415895754284629 0.086311653136016 -4.8185353793332 1.71925805969461e-06 *** df.mm.trans2 -0.0386086322443325 0.076576217334207 -0.50418568046826 0.614264709262994 df.mm.exp2 -0.605938686052291 0.0980778448412813 -6.17814030307127 1.01524475772870e-09 *** df.mm.exp3 -0.181459354416334 0.0980778448412813 -1.85015642125893 0.064646239834017 . df.mm.exp4 -0.169675078554218 0.0980778448412813 -1.73000414954878 0.084001269594423 . df.mm.exp5 -0.00243895568482951 0.0980778448412813 -0.0248675497384394 0.98016658806423 df.mm.exp6 0.0333063754467259 0.0980778448412813 0.339591224711610 0.734250297768746 df.mm.exp7 -0.111779854999972 0.0980778448412813 -1.13970545724026 0.254737825097212 df.mm.exp8 -0.356436794816887 0.0980778448412813 -3.63422335996174 0.000295971904650622 *** df.mm.trans1:exp2 0.358235082250304 0.0891422920478457 4.01868825695021 6.38420369954705e-05 *** df.mm.trans2:exp2 0.154064089190343 0.065739623979871 2.34354989979128 0.0193363338492973 * df.mm.trans1:exp3 -0.0238554342276444 0.0891422920478457 -0.267610734249915 0.789065452603674 df.mm.trans2:exp3 0.000280860177960683 0.065739623979871 0.00427231190197681 0.996592225266998 df.mm.trans1:exp4 0.0424513471285798 0.0891422920478457 0.476220053953680 0.63404294342161 df.mm.trans2:exp4 0.00234124787970619 0.0657396239798711 0.0356139530159628 0.971598745594618 df.mm.trans1:exp5 -0.0281403406549581 0.0891422920478457 -0.315678899526773 0.752325602508527 df.mm.trans2:exp5 0.0240452580812254 0.065739623979871 0.365765068698717 0.714633586391061 df.mm.trans1:exp6 -0.0703223431829625 0.0891422920478457 -0.788877440409745 0.430408912813901 df.mm.trans2:exp6 -0.0316929188172721 0.0657396239798711 -0.482097658894067 0.629863673091091 df.mm.trans1:exp7 0.0533427852894249 0.0891422920478457 0.598400423233385 0.549736041362014 df.mm.trans2:exp7 -0.0514394816097141 0.065739623979871 -0.782473012402146 0.434159815892625 df.mm.trans1:exp8 0.269471273606035 0.0891422920478457 3.02293409127736 0.002580354023948 ** df.mm.trans2:exp8 0.0673456538134586 0.065739623979871 1.02443016458505 0.305930612386386 df.mm.trans1:probe2 -0.362803663294253 0.0630331191975433 -5.75576249300372 1.21344248214595e-08 *** df.mm.trans1:probe3 -0.266809391258499 0.0630331191975433 -4.23284448961393 2.56504786301911e-05 *** df.mm.trans1:probe4 -0.393431760453757 0.0630331191975433 -6.24166732445457 6.89936459855538e-10 *** df.mm.trans1:probe5 0.297109721896682 0.0630331191975433 4.71354941146973 2.85411533335461e-06 *** df.mm.trans1:probe6 -0.307884196342943 0.0630331191975433 -4.88448295534997 1.24422908420100e-06 *** df.mm.trans1:probe7 0.531901538428242 0.0630331191975433 8.4384454585102 1.42128125954171e-16 *** df.mm.trans1:probe8 0.779122869266428 0.0630331191975433 12.3605317202325 2.46154222636506e-32 *** df.mm.trans1:probe9 0.680832773815821 0.0630331191975433 10.8011912226986 1.54545086084792e-25 *** df.mm.trans1:probe10 0.772867045871382 0.0630331191975433 12.2612851102806 6.96334834649128e-32 *** df.mm.trans1:probe11 0.652499920389778 0.0630331191975433 10.3516996889345 1.05769683353247e-23 *** df.mm.trans1:probe12 0.53582203614669 0.0630331191975434 8.5006428837425 8.694565663837e-17 *** df.mm.trans1:probe13 0.933305210621834 0.0630331191975434 14.8065845781309 3.43175021614836e-44 *** df.mm.trans1:probe14 -0.159176712559354 0.0630331191975433 -2.52528693781598 0.0117455606340263 * df.mm.trans1:probe15 -0.194080995526104 0.0630331191975433 -3.07903207070972 0.00214510783531837 ** df.mm.trans1:probe16 -0.211921549509012 0.0630331191975433 -3.36206667553383 0.000809003910072413 *** df.mm.trans1:probe17 -0.22779730477935 0.0630331191975433 -3.61393038579357 0.000319749398881626 *** df.mm.trans1:probe18 0.244314845485151 0.0630331191975433 3.87597581391265 0.000114577805463003 *** df.mm.trans1:probe19 -0.170009261666319 0.0630331191975433 -2.69714181735980 0.00713557281529438 ** df.mm.trans2:probe2 0.0608366347902432 0.0630331191975433 0.965153487003929 0.334749060822681 df.mm.trans2:probe3 0.0334656077952675 0.0630331191975433 0.530921017733353 0.595615544426049 df.mm.trans2:probe4 0.311963804657844 0.0630331191975433 4.94920461860949 9.0250452026114e-07 *** df.mm.trans2:probe5 0.138521745555707 0.0630331191975433 2.19760258288322 0.0282530048726454 * df.mm.trans2:probe6 0.416177440132179 0.0630331191975433 6.60252015813933 7.20850662537788e-11 *** df.mm.trans3:probe2 -0.360997346924544 0.0630331191975433 -5.72710586942703 1.42795401188967e-08 *** df.mm.trans3:probe3 0.27379309371117 0.0630331191975433 4.34363866482814 1.57481341505303e-05 *** df.mm.trans3:probe4 0.113883168315448 0.0630331191975433 1.80671954307930 0.0711680676558766 . df.mm.trans3:probe5 -0.00395777159339690 0.0630331191975433 -0.0627887631737437 0.949949831087595 df.mm.trans3:probe6 -0.558787193826808 0.0630331191975433 -8.86497766476685 4.60856987290189e-18 *** df.mm.trans3:probe7 -0.345309872231 0.0630331191975433 -5.47822916947537 5.69809003073017e-08 *** df.mm.trans3:probe8 -0.436970827028339 0.0630331191975433 -6.93240049978947 8.31381453313025e-12 *** df.mm.trans3:probe9 -0.47485843797578 0.0630331191975433 -7.5334751638673 1.29152383171501e-13 *** df.mm.trans3:probe10 -0.335182070252692 0.0630331191975433 -5.3175548746405 1.35314175401299e-07 *** df.mm.trans3:probe11 0.242593833465702 0.0630331191975433 3.84867251619616 0.000127876207576965 *** df.mm.trans3:probe12 -0.100138385504134 0.0630331191975433 -1.58866301999596 0.112517320841274 cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.54768817124690 0.224348752932737 20.2706193450978 1.57817482767030e-74 *** df.mm.trans1 -0.0139697732972879 0.192030975962375 -0.0727474993410699 0.942024576236792 df.mm.trans2 -0.0177717553725925 0.170371035844042 -0.104312069739723 0.916946900321945 df.mm.exp2 0.452823802237201 0.218209054986790 2.07518337066541 0.0382770722976912 * df.mm.exp3 0.250223688933009 0.218209054986790 1.14671542364801 0.251829715695376 df.mm.exp4 0.484917340095869 0.218209054986790 2.22226039210530 0.0265345546453117 * df.mm.exp5 0.258461369959689 0.218209054986790 1.18446674898682 0.236567415189211 df.mm.exp6 0.443657174679757 0.218209054986790 2.03317490516888 0.0423525885971258 * df.mm.exp7 0.305008979225376 0.218209054986790 1.39778332867003 0.162551593769434 df.mm.exp8 0.269929833535938 0.218209054986790 1.23702397937739 0.216428056678848 df.mm.trans1:exp2 -0.39652725196604 0.198328739162196 -1.99934338130267 0.0458967944308245 * df.mm.trans2:exp2 -0.196373820251265 0.146261179036396 -1.34262434875079 0.17976071444703 df.mm.trans1:exp3 -0.162318565738898 0.198328739162196 -0.81843189456346 0.413345521246744 df.mm.trans2:exp3 -0.203681850851964 0.146261179036396 -1.39258996949066 0.164116748352889 df.mm.trans1:exp4 -0.349957855378241 0.198328739162196 -1.76453426193589 0.0780098351691875 . df.mm.trans2:exp4 -0.224866151137737 0.146261179036396 -1.53742881480382 0.124569445672729 df.mm.trans1:exp5 -0.086120305806533 0.198328739162196 -0.434230087733793 0.664234221204448 df.mm.trans2:exp5 -0.282786284561817 0.146261179036396 -1.93343364537932 0.0535225654642976 . df.mm.trans1:exp6 -0.431223721046223 0.198328739162196 -2.17428761392751 0.0299653960983524 * df.mm.trans2:exp6 -0.0969671009221366 0.146261179036396 -0.662972236111995 0.507532404528551 df.mm.trans1:exp7 -0.210618002434949 0.198328739162196 -1.06196410729311 0.288560873337027 df.mm.trans2:exp7 -0.198979787488149 0.146261179036396 -1.36044156623839 0.174059567618140 df.mm.trans1:exp8 -0.105591609795027 0.198328739162196 -0.532407003851682 0.59458662774797 df.mm.trans2:exp8 -0.156935822670167 0.146261179036396 -1.07298343760181 0.283590406160542 df.mm.trans1:probe2 0.0859884418913936 0.140239596365767 0.613153803346112 0.539942623596648 df.mm.trans1:probe3 0.0442405602670526 0.140239596365767 0.315464115795558 0.752488592593837 df.mm.trans1:probe4 -0.0049979165847847 0.140239596365767 -0.0356384125047632 0.971579248016289 df.mm.trans1:probe5 0.116383914779836 0.140239596365767 0.829893395273962 0.406837683909463 df.mm.trans1:probe6 -0.203196202288663 0.140239596365767 -1.44892175643956 0.147737120485231 df.mm.trans1:probe7 0.0207531834130755 0.140239596365767 0.147983764577787 0.882391523152483 df.mm.trans1:probe8 -0.0657803664604101 0.140239596365767 -0.469057015030509 0.639152062446813 df.mm.trans1:probe9 -0.0654766891951477 0.140239596365767 -0.466891597608241 0.64069996836226 df.mm.trans1:probe10 0.0637468942812422 0.140239596365767 0.454557029064604 0.649546809726792 df.mm.trans1:probe11 -0.108169296922742 0.140239596365767 -0.771317799864596 0.440738108643487 df.mm.trans1:probe12 -0.0035158794202576 0.140239596365767 -0.0250705186792440 0.980004741571876 df.mm.trans1:probe13 -0.0330874852873981 0.140239596365767 -0.235935400164022 0.813541003901549 df.mm.trans1:probe14 0.191206292428785 0.140239596365767 1.36342586105346 0.173118030837079 df.mm.trans1:probe15 0.189253621808729 0.140239596365767 1.34950204302589 0.177543733062341 df.mm.trans1:probe16 -0.00486034784022748 0.140239596365767 -0.0346574574241566 0.972361217439547 df.mm.trans1:probe17 -0.114559039300891 0.140239596365767 -0.816880840145198 0.414230929341962 df.mm.trans1:probe18 -0.0539566782771096 0.140239596365767 -0.384746388861404 0.700523884988978 df.mm.trans1:probe19 -0.176012891463993 0.140239596365767 -1.25508697989207 0.209800446428233 df.mm.trans2:probe2 -0.096234858611977 0.140239596365767 -0.686217452886711 0.492767637102708 df.mm.trans2:probe3 -0.0225717409801867 0.140239596365767 -0.160951268865008 0.872170948157865 df.mm.trans2:probe4 -0.151547113236164 0.140239596365767 -1.08062998727481 0.280175627823835 df.mm.trans2:probe5 -0.100512026226042 0.140239596365767 -0.716716454059744 0.473750693320979 df.mm.trans2:probe6 -0.143367271303427 0.140239596365767 -1.02230236693995 0.306935680444662 df.mm.trans3:probe2 -0.0200976793552777 0.140239596365767 -0.143309592127318 0.886080464654731 df.mm.trans3:probe3 0.210063119657106 0.140239596365767 1.49788736634145 0.134542711732748 df.mm.trans3:probe4 0.155721997115460 0.140239596365767 1.11039963855367 0.267148434052701 df.mm.trans3:probe5 0.00830273598486034 0.140239596365767 0.0592039352652264 0.952803926254779 df.mm.trans3:probe6 0.161189027475435 0.140239596365767 1.14938313894621 0.250729120953582 df.mm.trans3:probe7 0.179437286913788 0.140239596365767 1.2795051580567 0.201076775658812 df.mm.trans3:probe8 0.395690356117354 0.140239596365767 2.82153091117955 0.00489363747440502 ** df.mm.trans3:probe9 0.167318386973028 0.140239596365767 1.19308947907005 0.233175264848091 df.mm.trans3:probe10 0.0283768889440502 0.140239596365767 0.202345768808681 0.8396960082675 df.mm.trans3:probe11 0.22500512415594 0.140239596365767 1.60443362635679 0.10899891540579 df.mm.trans3:probe12 0.202289106330314 0.140239596365767 1.44245356926665 0.149551701976109