fitVsDatCorrelation=0.875979299585055 cont.fitVsDatCorrelation=0.244611122809072 fstatistic=7432.89044026927,63,945 cont.fstatistic=1828.10992380486,63,945 residuals=-1.00858547273234,-0.106831820700559,-0.00031382281029307,0.109118288265411,0.907861791000451 cont.residuals=-0.759333267109259,-0.277041814189186,-0.107170986305788,0.239356659486270,1.28613825745305 predictedValues: Include Exclude Both Lung 81.2063264148323 55.200667509406 109.341529362471 cerebhem 59.50237687669 68.8385825582735 79.6698106598359 cortex 59.7339587545684 55.8280958881591 73.656336377219 heart 72.5982580466996 54.2794440172278 91.6360990718172 kidney 62.8906253942894 54.2839805712307 69.9559729377926 liver 62.8871766802883 53.064997998432 70.1862254188757 stomach 63.7804406727114 52.8127892697202 70.2610198777895 testicle 63.6426847999915 57.3129218579295 69.2923979880114 diffExp=26.0056589054263,-9.33620568158347,3.90586286640928,18.3188140294718,8.6066448230587,9.82217868185625,10.9676514029912,6.32976294206205 diffExpScore=1.23369909242243 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=1,0,0,0,0,0,0,0 diffExp1.4Score=0.5 diffExp1.3=1,0,0,1,0,0,0,0 diffExp1.3Score=0.666666666666667 diffExp1.2=1,0,0,1,0,0,1,0 diffExp1.2Score=0.75 cont.predictedValues: Include Exclude Both Lung 69.0334047608661 65.8993254410075 68.3582333452104 cerebhem 71.9123419919156 73.9576089839313 70.4812157305205 cortex 73.4581679375778 67.1296832788754 78.8998511611066 heart 81.3466500573216 78.5574574205479 72.0454174155923 kidney 71.5127753888531 83.5635288605398 68.0560074623695 liver 74.8990715412486 79.9419099593393 71.9923404986635 stomach 74.3350915468256 68.8699274930713 81.3815798537338 testicle 69.1759386295686 74.4379827735475 80.2911143235214 cont.diffExp=3.1340793198586,-2.04526699201566,6.32848465870234,2.78919263677371,-12.0507534716867,-5.04283841809062,5.46516405375426,-5.26204414397894 cont.diffExpScore=5.48124940165039 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=-0.319693995214980 cont.tran.correlation=0.314531000883875 tran.covariance=-0.00306545928028392 cont.tran.covariance=0.0014633493644963 tran.mean=61.1164579569031 cont.tran.mean=73.6269291290648 weightedLogRatios: wLogRatio Lung 1.62281399649486 cerebhem -0.606150451626922 cortex 0.274286643632811 heart 1.20375987168254 kidney 0.598651706300283 liver 0.688882134290948 stomach 0.766301903082357 testicle 0.429603777310578 cont.weightedLogRatios: wLogRatio Lung 0.19566948013602 cerebhem -0.120294636511215 cortex 0.383032126406842 heart 0.152859856779266 kidney -0.677078399886625 liver -0.283357220073879 stomach 0.32610287603441 testicle -0.31329017303504 varWeightedLogRatios=0.433169777823512 cont.varWeightedLogRatios=0.135987922188717 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.11129280614473 0.0909595404782267 34.205238832418 1.67818443601071e-167 *** df.mm.trans1 1.10219167932017 0.0777979892442625 14.1673543240253 1.85461577154415e-41 *** df.mm.trans2 0.881981564429478 0.068295921067627 12.9141177195068 2.96577598647929e-35 *** df.mm.exp2 0.226397992349316 0.086535060290209 2.61625740584284 0.00903180213588403 ** df.mm.exp3 0.099275841575853 0.086535060290209 1.14723259269614 0.251575870286633 df.mm.exp4 0.0477693101987116 0.086535060290209 0.552022614169443 0.58106338044076 df.mm.exp5 0.174268272101565 0.086535060290209 2.01384585065439 0.0443087426019027 * df.mm.exp6 0.148215820555684 0.086535060290209 1.71278346670839 0.087080405677994 . df.mm.exp7 0.156490869889782 0.086535060290209 1.80841001745379 0.0708604772445476 . df.mm.exp8 0.249983376669074 0.086535060290209 2.88881033688214 0.00395534807874358 ** df.mm.trans1:exp2 -0.537374888733618 0.0788613368258957 -6.81417422481684 1.68671477084728e-11 *** df.mm.trans2:exp2 -0.00560865736912652 0.0551914387592003 -0.101621872798008 0.919078374775411 df.mm.trans1:exp3 -0.406368315181777 0.0788613368258957 -5.15294733183293 3.12181727195342e-07 *** df.mm.trans2:exp3 -0.0879736341386382 0.0551914387592003 -1.59397247320307 0.111276583506630 df.mm.trans1:exp4 -0.159821538148333 0.0788613368258957 -2.02661461980001 0.0429822459669357 * df.mm.trans2:exp4 -0.064598763922246 0.0551914387592003 -1.17044899307825 0.242115406490878 df.mm.trans1:exp5 -0.429864314984528 0.0788613368258957 -5.45088800527882 6.3971340944511e-08 *** df.mm.trans2:exp5 -0.191014151563827 0.0551914387592003 -3.46093807043553 0.000562387434847891 *** df.mm.trans1:exp6 -0.403866701636565 0.0788613368258957 -5.12122565875585 3.67868460740949e-07 *** df.mm.trans2:exp6 -0.187673326832711 0.0551914387592003 -3.40040649513647 0.000701026312598374 *** df.mm.trans1:exp7 -0.398037454715438 0.0788613368258957 -5.04730798051517 5.37395998337641e-07 *** df.mm.trans2:exp7 -0.200712533262551 0.0551914387592002 -3.63666064474707 0.000291121468348178 *** df.mm.trans1:exp8 -0.4936921424313 0.0788613368258957 -6.2602558148518 5.82351510832291e-10 *** df.mm.trans2:exp8 -0.212432311789319 0.0551914387592003 -3.84900840719444 0.000126570910395404 *** df.mm.trans1:probe2 0.313472346391045 0.0577205882709079 5.43085848189528 7.13400730016237e-08 *** df.mm.trans1:probe3 0.0451132169718764 0.0577205882709079 0.781579299922246 0.434657622359573 df.mm.trans1:probe4 0.0298850613076240 0.0577205882709079 0.517753928067405 0.604751147076788 df.mm.trans1:probe5 -0.0525612433599167 0.0577205882709079 -0.910615171023965 0.362730383040702 df.mm.trans1:probe6 -0.0251964969562402 0.0577205882709079 -0.436525297316481 0.662555364271296 df.mm.trans1:probe7 -0.0662995002748093 0.0577205882709079 -1.14862828430710 0.250999944076367 df.mm.trans1:probe8 -0.0615151473088594 0.0577205882709079 -1.06574013106280 0.286813341642427 df.mm.trans1:probe9 0.00533971651635328 0.0577205882709079 0.0925097383154112 0.92631266176188 df.mm.trans1:probe10 0.162548311342298 0.0577205882709079 2.81612360877869 0.00496186469662692 ** df.mm.trans1:probe11 0.350281005703246 0.0577205882709079 6.06856264283421 1.86590792449692e-09 *** df.mm.trans1:probe12 0.233250294788886 0.0577205882709079 4.04102421295744 5.75432162159023e-05 *** df.mm.trans1:probe13 0.257750571210584 0.0577205882709079 4.46548760038357 8.95320662857745e-06 *** df.mm.trans1:probe14 0.198804654703656 0.0577205882709079 3.44425898382358 0.000597789547508804 *** df.mm.trans1:probe15 0.205375158408738 0.0577205882709079 3.55809191418533 0.00039213103135428 *** df.mm.trans1:probe16 1.0739139538991 0.0577205882709079 18.6053882344156 4.48840781818274e-66 *** df.mm.trans1:probe17 0.519121496924438 0.0577205882709079 8.993697266008 1.28116077538587e-18 *** df.mm.trans1:probe18 1.07592947652778 0.0577205882709079 18.6403068429930 2.78551823028131e-66 *** df.mm.trans1:probe19 1.02587943157977 0.0577205882709079 17.7731977845560 3.43109439977989e-61 *** df.mm.trans1:probe20 0.315620805705839 0.0577205882709079 5.46808019738977 5.82401016923806e-08 *** df.mm.trans1:probe21 0.999599012416331 0.0577205882709079 17.3178937076105 1.44772904239321e-58 *** df.mm.trans2:probe2 0.163177768187517 0.0577205882709079 2.82702884838339 0.00479738122526504 ** df.mm.trans2:probe3 -0.0610635034710111 0.0577205882709078 -1.05791547349472 0.290364326886571 df.mm.trans2:probe4 0.105838143915898 0.0577205882709078 1.83362898900395 0.0670234546243275 . df.mm.trans2:probe5 0.0467900062548813 0.0577205882709078 0.81062940722772 0.41778262008418 df.mm.trans2:probe6 0.116971764258679 0.0577205882709079 2.02651718845414 0.0429922390028846 * df.mm.trans3:probe2 -0.528715085796307 0.0577205882709079 -9.15990466546904 3.14647972262802e-19 *** df.mm.trans3:probe3 -0.602066689275712 0.0577205882709079 -10.4307095147740 3.48032185817051e-24 *** df.mm.trans3:probe4 -0.196533239821347 0.0577205882709078 -3.40490708270212 0.000689713147165214 *** df.mm.trans3:probe5 -0.0728480509480735 0.0577205882709079 -1.26208088188855 0.207231075740832 df.mm.trans3:probe6 -0.517604116372149 0.0577205882709079 -8.96740888957694 1.5966621645685e-18 *** df.mm.trans3:probe7 -0.51148705246541 0.0577205882709079 -8.86143173151283 3.85758574717785e-18 *** df.mm.trans3:probe8 -0.226288978649164 0.0577205882709079 -3.920420519401 9.4777326650071e-05 *** df.mm.trans3:probe9 -0.24332868306651 0.0577205882709079 -4.21563068492065 2.72989316163759e-05 *** df.mm.trans3:probe10 -0.780006323595614 0.0577205882709079 -13.5134853431276 3.57059790914191e-38 *** df.mm.trans3:probe11 -0.72230323442684 0.0577205882709078 -12.5137885122854 2.3506065307049e-33 *** df.mm.trans3:probe12 -0.637145266516946 0.0577205882709079 -11.0384402793427 9.88558833642107e-27 *** df.mm.trans3:probe13 -0.165384541938942 0.0577205882709079 -2.86526085220616 0.00425902429759589 ** df.mm.trans3:probe14 -0.769837350284597 0.0577205882709079 -13.3373094998862 2.63105338617574e-37 *** df.mm.trans3:probe15 -0.0412979264451276 0.0577205882709079 -0.715479999117445 0.474489230698706 cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.18770943515128 0.18284760604282 22.9027304528700 1.08640461183335e-92 *** df.mm.trans1 0.0371752980905121 0.156390148998868 0.237708694112064 0.812158567036778 df.mm.trans2 0.013774202171652 0.137289014478852 0.100329966122481 0.920103648640885 df.mm.exp2 0.125637046419665 0.173953480081876 0.722245087367785 0.47032249017044 df.mm.exp3 -0.0627936262807597 0.173953480081876 -0.360979419619568 0.718195512293293 df.mm.exp4 0.287296529305938 0.173953480081876 1.65157103595004 0.0989542554690525 . df.mm.exp5 0.277195567179129 0.173953480081876 1.59350400491361 0.111381563873146 df.mm.exp6 0.222925303226306 0.173953480081876 1.28152252614538 0.200324543244731 df.mm.exp7 -0.0563029085782222 0.173953480081876 -0.323666468481813 0.746262174538172 df.mm.exp8 -0.036996236879266 0.173953480081876 -0.212678911981828 0.83162328365492 df.mm.trans1:exp2 -0.0847796558743167 0.158527698932287 -0.534793959953517 0.592918145376299 df.mm.trans2:exp2 -0.0102731742821745 0.110946277851902 -0.0925959345466984 0.926244199475922 df.mm.trans1:exp3 0.124919212354686 0.158527698932287 0.787996124311651 0.430896582566988 df.mm.trans2:exp3 0.0812917408376724 0.110946277851902 0.732712646260974 0.46391540664069 df.mm.trans1:exp4 -0.123167390284885 0.158527698932287 -0.776945550300926 0.437385329813335 df.mm.trans2:exp4 -0.111594435949241 0.110946277851902 -1.00584208961209 0.314749013720501 df.mm.trans1:exp5 -0.241909971087465 0.158527698932287 -1.52597919932461 0.127349642997309 df.mm.trans2:exp5 -0.0397166052816063 0.110946277851902 -0.35798051138428 0.720437841606071 df.mm.trans1:exp6 -0.141374323172633 0.158527698932287 -0.891795718507334 0.372729448518568 df.mm.trans2:exp6 -0.0297532631735328 0.110946277851902 -0.268177209272845 0.788621443770781 df.mm.trans1:exp7 0.130295529772128 0.158527698932287 0.821910181310219 0.411335335844974 df.mm.trans2:exp7 0.100394319969635 0.110946277851902 0.904891285344854 0.365753618238898 df.mm.trans1:exp8 0.0390588169586879 0.158527698932287 0.24638480985819 0.80543787136623 df.mm.trans2:exp8 0.158834364240523 0.110946277851902 1.43163310492079 0.152579489256718 df.mm.trans1:probe2 -0.000336497207221442 0.116030394714287 -0.0029000781049658 0.997686687767473 df.mm.trans1:probe3 -0.0801543425084647 0.116030394714287 -0.690804704283191 0.489857921390136 df.mm.trans1:probe4 0.0466847646649218 0.116030394714287 0.402349442832444 0.687517862502136 df.mm.trans1:probe5 0.0925206302874948 0.116030394714287 0.797382707482102 0.425429102194553 df.mm.trans1:probe6 0.0486191491302367 0.116030394714287 0.419020802695333 0.67529615230681 df.mm.trans1:probe7 -0.0684956319238654 0.116030394714287 -0.590324906612006 0.555113979538542 df.mm.trans1:probe8 -0.0411807662358737 0.116030394714287 -0.354913609811268 0.722733503809776 df.mm.trans1:probe9 0.0529488748513635 0.116030394714287 0.456336246909656 0.648253060214746 df.mm.trans1:probe10 0.128351835842198 0.116030394714287 1.10619149541163 0.268925164315481 df.mm.trans1:probe11 -0.0315855929869509 0.116030394714287 -0.272218267159457 0.785513661575264 df.mm.trans1:probe12 -0.050507500555444 0.116030394714287 -0.435295429958795 0.663447399609982 df.mm.trans1:probe13 0.148407384002845 0.116030394714287 1.27903886191444 0.201197353895182 df.mm.trans1:probe14 -0.0316350800596718 0.116030394714287 -0.2726447681021 0.785185859043148 df.mm.trans1:probe15 0.129822719225544 0.116030394714287 1.1188682029844 0.263480690549645 df.mm.trans1:probe16 -0.052190989367816 0.116030394714287 -0.449804462842095 0.652954594859395 df.mm.trans1:probe17 0.0633272323720833 0.116030394714287 0.545781409500678 0.585345011797519 df.mm.trans1:probe18 -0.0840809252453444 0.116030394714287 -0.724645688333521 0.468848796315936 df.mm.trans1:probe19 -0.0775637691048264 0.116030394714287 -0.668478025053863 0.503991750875147 df.mm.trans1:probe20 -0.0326112536945549 0.116030394714287 -0.281057853632722 0.778727551166772 df.mm.trans1:probe21 0.189067880737473 0.116030394714287 1.62946856470698 0.103547129079266 df.mm.trans2:probe2 -0.070079134668987 0.116030394714287 -0.603972216431306 0.546007070858102 df.mm.trans2:probe3 -0.115711006017706 0.116030394714287 -0.99724737042077 0.318899733262063 df.mm.trans2:probe4 -0.0639501878108254 0.116030394714287 -0.551150308229981 0.581660922100592 df.mm.trans2:probe5 -0.0351579568633729 0.116030394714287 -0.303006440251677 0.761951641883231 df.mm.trans2:probe6 0.00443421405609495 0.116030394714287 0.0382159697639034 0.96952355962889 df.mm.trans3:probe2 0.0115180341736786 0.116030394714287 0.0992673876706239 0.92094702444672 df.mm.trans3:probe3 -0.0454837356513048 0.116030394714287 -0.39199845663978 0.695147739218427 df.mm.trans3:probe4 -0.0721370390589194 0.116030394714287 -0.621708124294068 0.534283759407478 df.mm.trans3:probe5 0.0689627019957545 0.116030394714287 0.594350317997008 0.552420090737584 df.mm.trans3:probe6 0.0428678319588009 0.116030394714287 0.369453470052901 0.711872518995739 df.mm.trans3:probe7 -0.0559284360240283 0.116030394714287 -0.4820153905513 0.629906626859673 df.mm.trans3:probe8 0.0245920429489802 0.116030394714287 0.211944835743563 0.832195773780901 df.mm.trans3:probe9 -0.0357987733325342 0.116030394714287 -0.308529273046818 0.75774762816377 df.mm.trans3:probe10 -0.135617822219448 0.116030394714287 -1.16881290073513 0.242773773902552 df.mm.trans3:probe11 -0.0544716326835372 0.116030394714287 -0.469460030862329 0.638849145586351 df.mm.trans3:probe12 -0.111665531463611 0.116030394714287 -0.962381725396832 0.336104075856332 df.mm.trans3:probe13 -0.0857889108985943 0.116030394714287 -0.739365845560046 0.459868490031941 df.mm.trans3:probe14 0.165436798725409 0.116030394714287 1.42580570489983 0.154254666183576 df.mm.trans3:probe15 0.0750606580369372 0.116030394714287 0.646905133967412 0.517850436497394