fitVsDatCorrelation=0.935497951334527 cont.fitVsDatCorrelation=0.253260779754479 fstatistic=8306.61625119572,64,968 cont.fstatistic=1094.99524252745,64,968 residuals=-1.00471192884873,-0.112956598913450,0.00838514470841976,0.107300576922533,1.00501418334435 cont.residuals=-1.15542544759709,-0.422594256076384,-0.102539750268121,0.329469338674082,1.94342029056322 predictedValues: Include Exclude Both Lung 127.342596523898 73.5110645433738 163.382498606319 cerebhem 91.3959741235178 61.5635657980371 139.577349563895 cortex 111.074408915700 78.6731891130725 163.063487481926 heart 106.392699751788 58.7244952770952 120.833146760042 kidney 124.287989703871 64.4409965961226 138.098242052422 liver 129.481820046822 62.7471024658923 139.284189666303 stomach 152.323324337648 63.3187405007102 171.406839334642 testicle 120.064976435197 61.5763964842478 157.366367608637 diffExp=53.8315319805238,29.8324083254807,32.4012198026274,47.6682044746925,59.8469931077484,66.73471758093,89.0045838369377,58.4885799509491 diffExpScore=0.99772110021876 diffExp1.5=1,0,0,1,1,1,1,1 diffExp1.5Score=0.857142857142857 diffExp1.4=1,1,1,1,1,1,1,1 diffExp1.4Score=0.888888888888889 diffExp1.3=1,1,1,1,1,1,1,1 diffExp1.3Score=0.888888888888889 diffExp1.2=1,1,1,1,1,1,1,1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 117.898035064562 100.254463670604 125.380794227203 cerebhem 88.1903013454918 112.030025049146 107.231892034333 cortex 110.948691830431 118.296248762373 104.443230430828 heart 109.745691293402 116.507184063837 108.217467650928 kidney 96.895008355193 141.292586494484 109.136800431974 liver 108.721018900762 105.252243416827 108.443577898612 stomach 100.432925222953 106.668201717253 106.704387252515 testicle 104.828756895055 95.7016405749554 102.394324235716 cont.diffExp=17.6435713939579,-23.8397237036538,-7.34755693194212,-6.76149277043548,-44.3975781392908,3.46877548393432,-6.23527649430038,9.12711632009922 cont.diffExpScore=2.00230462698347 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,-1,0,0,0 cont.diffExp1.4Score=0.5 cont.diffExp1.3=0,0,0,0,-1,0,0,0 cont.diffExp1.3Score=0.5 cont.diffExp1.2=0,-1,0,0,-1,0,0,0 cont.diffExp1.2Score=0.666666666666667 tran.correlation=0.0513240474496174 cont.tran.correlation=-0.357081231264370 tran.covariance=0.00150732921239917 cont.tran.covariance=-0.00383697835687032 tran.mean=92.932458788562 cont.tran.mean=108.353938916083 weightedLogRatios: wLogRatio Lung 2.51215022979569 cerebhem 1.70603262473760 cortex 1.56506092924957 heart 2.59700190678694 kidney 2.95200535894553 liver 3.2608872927874 stomach 4.02666088728983 testicle 2.97428235690374 cont.weightedLogRatios: wLogRatio Lung 0.760089039086273 cerebhem -1.10043394089440 cortex -0.304021176498961 heart -0.282677170738105 kidney -1.79633625472302 liver 0.151509816846807 stomach -0.279457443385354 testicle 0.419644149309289 varWeightedLogRatios=0.647901539948839 cont.varWeightedLogRatios=0.675123862652138 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.56472392544214 0.094672603576119 37.6531730489065 8.1996367162034e-192 *** df.mm.trans1 1.52048952028576 0.0810975783935062 18.7488893060155 3.77661760364616e-67 *** df.mm.trans2 0.700776452627065 0.0709996242537621 9.870143116848 5.85632021240168e-22 *** df.mm.exp2 -0.351570191556587 0.0898570588990006 -3.91254950767699 9.77108083454107e-05 *** df.mm.exp3 -0.0668597947730484 0.0898570588990006 -0.744068363601784 0.457015692372061 df.mm.exp4 -0.102639671289273 0.0898570588990006 -1.14225496078878 0.253630511384274 df.mm.exp5 0.0121631345187807 0.0898570588990006 0.135360923980965 0.892354659413422 df.mm.exp6 0.0179135820125294 0.0898570588990006 0.199356424882149 0.842025811297517 df.mm.exp7 -0.0180760975792244 0.0898570588990006 -0.201165025883408 0.840611798818556 df.mm.exp8 -0.198487877546151 0.0898570588990006 -2.20892915902413 0.0274131645755812 * df.mm.trans1:exp2 0.0198905573955923 0.0822060249574693 0.241959849121558 0.808862523717161 df.mm.trans2:exp2 0.174204489900293 0.0569848156984559 3.05703348804572 0.00229675968843441 ** df.mm.trans1:exp3 -0.0698209427696896 0.0822060249574693 -0.849340943146353 0.395901604285617 df.mm.trans2:exp3 0.134726287253643 0.0569848156984559 2.3642488898546 0.0182632576728649 * df.mm.trans1:exp4 -0.0771044303747943 0.0822060249574692 -0.937941354233898 0.34850850734111 df.mm.trans2:exp4 -0.121939325782334 0.0569848156984559 -2.13985645628118 0.0326158375040670 * df.mm.trans1:exp5 -0.0364428289932382 0.0822060249574693 -0.443310925349967 0.657639913417536 df.mm.trans2:exp5 -0.143849043734587 0.0569848156984559 -2.52433989601346 0.0117505014445966 * df.mm.trans1:exp6 -0.00125416132912686 0.0822060249574693 -0.0152563188619778 0.987830834677788 df.mm.trans2:exp6 -0.176237113803296 0.0569848156984559 -3.09270305858112 0.00204026316685441 ** df.mm.trans1:exp7 0.197200428217451 0.0822060249574693 2.39885614612161 0.0166346856963878 * df.mm.trans2:exp7 -0.131178491518435 0.0569848156984559 -2.30199027426159 0.0215472373696431 * df.mm.trans1:exp8 0.139639879216997 0.0822060249574693 1.69865748026671 0.089705081646955 . df.mm.trans2:exp8 0.0213305678045427 0.0569848156984559 0.374320203427817 0.708248082769863 df.mm.trans1:probe2 0.134670358694038 0.0601686493146024 2.23821475516078 0.0254337625671692 * df.mm.trans1:probe3 -0.144498169892131 0.0601686493146024 -2.40155249516400 0.0165133348246529 * df.mm.trans1:probe4 -0.482812868679643 0.0601686493146024 -8.02432619278474 2.93922191873705e-15 *** df.mm.trans1:probe5 -0.408470990953512 0.0601686493146024 -6.78876783186123 1.9696368407051e-11 *** df.mm.trans1:probe6 -0.873331536064936 0.0601686493146024 -14.5147272876040 2.45061886801509e-43 *** df.mm.trans1:probe7 -0.696271023588225 0.0601686493146024 -11.5719902560493 4.24759302733527e-29 *** df.mm.trans1:probe8 -0.601730805373965 0.0601686493146024 -10.0007364670546 1.78321613210826e-22 *** df.mm.trans1:probe9 -0.48690627103383 0.0601686493146024 -8.09235833910705 1.74492898519026e-15 *** df.mm.trans1:probe10 -0.377036807820977 0.0601686493146024 -6.26633325022096 5.55564747037552e-10 *** df.mm.trans1:probe11 -0.0788256477961093 0.0601686493146024 -1.31007839953255 0.190480108696862 df.mm.trans1:probe12 -0.089522487961931 0.0601686493146024 -1.48785935834868 0.137113658491896 df.mm.trans1:probe13 0.0065316054195596 0.0601686493146024 0.108554961661312 0.913577982062563 df.mm.trans1:probe14 0.101385904791183 0.0601686493146024 1.68502876408392 0.0923053450190402 . df.mm.trans1:probe15 -0.0331858816892751 0.0601686493146024 -0.551547725722691 0.581385552333217 df.mm.trans1:probe16 -0.208168489732676 0.0601686493146024 -3.45975008752864 0.000564260919969241 *** df.mm.trans1:probe17 -0.799771543332234 0.0601686493146024 -13.2921638169155 3.73672619279362e-37 *** df.mm.trans1:probe18 -0.821931735580443 0.0601686493146024 -13.6604651249994 5.59291956645132e-39 *** df.mm.trans1:probe19 -0.566055571326979 0.0601686493146024 -9.40781582726343 3.56462037090493e-20 *** df.mm.trans1:probe20 -0.766070397610606 0.0601686493146024 -12.7320524282517 1.91453546497284e-34 *** df.mm.trans1:probe21 -0.830650611458703 0.0601686493146024 -13.8053724143864 1.04840763498489e-39 *** df.mm.trans1:probe22 -0.7956451210332 0.0601686493146024 -13.2235828807296 8.10141398150012e-37 *** df.mm.trans2:probe2 0.0589854128517883 0.0601686493146024 0.980334668032394 0.327165891771470 df.mm.trans2:probe3 0.2137594398697 0.0601686493146024 3.55267140453862 0.000399735344637692 *** df.mm.trans2:probe4 0.0325219598621598 0.0601686493146024 0.540513377525113 0.588967378483699 df.mm.trans2:probe5 0.223116544440469 0.0601686493146024 3.7081860234865 0.000220611017690114 *** df.mm.trans2:probe6 0.142263294300193 0.0601686493146024 2.36440897245914 0.018255413467663 * df.mm.trans3:probe2 0.0953278546208706 0.0601686493146024 1.58434426743456 0.113442017361107 df.mm.trans3:probe3 -1.00048164660907 0.0601686493146024 -16.6279558874236 8.35614675889276e-55 *** df.mm.trans3:probe4 -1.47923565122305 0.0601686493146024 -24.584823958547 4.37665586300179e-104 *** df.mm.trans3:probe5 -0.518172308963683 0.0601686493146024 -8.61199835572721 2.87875412251432e-17 *** df.mm.trans3:probe6 -1.74411778739586 0.0601686493146024 -28.9871520677892 1.67800166466654e-133 *** df.mm.trans3:probe7 -0.0828620729914723 0.0601686493146024 -1.37716358827025 0.168780043256840 df.mm.trans3:probe8 -0.337624752625814 0.0601686493146024 -5.61130682625903 2.62108273749091e-08 *** df.mm.trans3:probe9 -0.00519453903336653 0.0601686493146024 -0.086332983913366 0.931219572813558 df.mm.trans3:probe10 -1.83565969427713 0.0601686493146024 -30.5085740695134 8.8297461023858e-144 *** df.mm.trans3:probe11 -1.05647791174299 0.0601686493146024 -17.5586110670195 3.96023597484105e-60 *** df.mm.trans3:probe12 -1.04227058687951 0.0601686493146024 -17.3224860247371 9.18362880698265e-59 *** df.mm.trans3:probe13 -1.14037805052897 0.0601686493146024 -18.9530272578715 2.24502929054106e-68 *** df.mm.trans3:probe14 -0.167132647575880 0.0601686493146024 -2.77773640392020 0.00557970410241953 ** df.mm.trans3:probe15 -0.0341576448434191 0.0601686493146024 -0.567698381674149 0.570371431163296 cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.58014845741924 0.259206813892309 17.6698613305827 8.93694422498911e-61 *** df.mm.trans1 0.0808485268899579 0.222039366360734 0.364117985990863 0.71584942429067 df.mm.trans2 0.0528183104487435 0.194391890527990 0.271710462330929 0.785902592887225 df.mm.exp2 -0.0229060651385719 0.246022197163053 -0.0931056847825434 0.92583886720964 df.mm.exp3 0.287439973823514 0.246022197163052 1.16834975517681 0.242953374227418 df.mm.exp4 0.225799665369522 0.246022197163052 0.917802003125238 0.3589511493861 df.mm.exp5 0.285682409464879 0.246022197163053 1.16120582922663 0.245844467182365 df.mm.exp6 0.112738639203301 0.246022197163053 0.458245802628058 0.646878710335471 df.mm.exp7 0.0629746454933923 0.246022197163053 0.255971396969744 0.798027307655106 df.mm.exp8 0.038556018135547 0.246022197163053 0.156717640034707 0.875500063212842 df.mm.trans1:exp2 -0.267417081249583 0.225074213733277 -1.18812847022309 0.235074223611444 df.mm.trans2:exp2 0.133961390714363 0.156020347592544 0.858614871594898 0.390765586173679 df.mm.trans1:exp3 -0.348192256422319 0.225074213733277 -1.54701087542149 0.122187474401453 df.mm.trans2:exp3 -0.121959503461867 0.156020347592544 -0.781689730498301 0.434588085220385 df.mm.trans1:exp4 -0.297454014755916 0.225074213733277 -1.32158193434105 0.186619657576419 df.mm.trans2:exp4 -0.0755583190690231 0.156020347592544 -0.48428503227251 0.628293146784228 df.mm.trans1:exp5 -0.481874546542693 0.225074213733277 -2.14095848009375 0.0325266068284145 * df.mm.trans2:exp5 0.0574388218385618 0.156020347592544 0.368149556931937 0.712842209470771 df.mm.trans1:exp6 -0.193773638901974 0.225074213733277 -0.860932204040063 0.389488576506675 df.mm.trans2:exp6 -0.0640904423317322 0.156020347592544 -0.410782589070421 0.681322874699621 df.mm.trans1:exp7 -0.223304692814204 0.225074213733277 -0.992138055756266 0.321378117792754 df.mm.trans2:exp7 -0.00096313796004293 0.156020347592544 -0.00617315609729457 0.995075837273758 df.mm.trans1:exp8 -0.156048027320611 0.225074213733277 -0.693318104869777 0.48827626049941 df.mm.trans2:exp8 -0.0850321675175898 0.156020347592544 -0.545006909865733 0.585874306161014 df.mm.trans1:probe2 0.230398905597564 0.164737456200854 1.39858239231674 0.162258541867913 df.mm.trans1:probe3 0.0824918710922217 0.164737456200854 0.500747510582199 0.616662665415651 df.mm.trans1:probe4 0.0943491160448815 0.164737456200854 0.572724128566412 0.566964497411182 df.mm.trans1:probe5 0.333353808217851 0.164737456200854 2.02354592516843 0.0432912510533693 * df.mm.trans1:probe6 0.152084197215936 0.164737456200854 0.92319136596664 0.356137540012456 df.mm.trans1:probe7 0.320398350839676 0.164737456200854 1.94490286683215 0.0520759619263498 . df.mm.trans1:probe8 0.399148232337840 0.164737456200854 2.42293550928201 0.015578241566495 * df.mm.trans1:probe9 -0.0228055558746835 0.164737456200854 -0.138435765615308 0.889924824721733 df.mm.trans1:probe10 0.457146633463492 0.164737456200854 2.77500116856316 0.00562646801881415 ** df.mm.trans1:probe11 0.302173961744316 0.164737456200854 1.83427599717149 0.066919844646264 . df.mm.trans1:probe12 0.176876882290199 0.164737456200854 1.07368953223694 0.283229427716768 df.mm.trans1:probe13 0.329140207405181 0.164737456200854 1.99796825200385 0.045999512321252 * df.mm.trans1:probe14 0.269635378437006 0.164737456200854 1.63675817664840 0.102006048760656 df.mm.trans1:probe15 0.174958990525557 0.164737456200854 1.06204742115382 0.288479045873317 df.mm.trans1:probe16 0.0834501326062446 0.164737456200854 0.506564411826895 0.612575842149881 df.mm.trans1:probe17 0.00110674030386455 0.164737456200854 0.00671820683278711 0.994641071058304 df.mm.trans1:probe18 0.226517326567644 0.164737456200854 1.37502017932987 0.169443349407444 df.mm.trans1:probe19 0.181546701865908 0.164737456200854 1.10203657415081 0.270719697303607 df.mm.trans1:probe20 0.103590193499645 0.164737456200854 0.628819916785312 0.529615310971139 df.mm.trans1:probe21 -0.0155766636688388 0.164737456200854 -0.0945544749085306 0.924688279873633 df.mm.trans1:probe22 0.146471397606966 0.164737456200854 0.889120185444545 0.374159385037818 df.mm.trans2:probe2 -0.0174352931861755 0.164737456200854 -0.105836848451258 0.915733727690508 df.mm.trans2:probe3 -0.126051256074185 0.164737456200854 -0.765164516808482 0.444360092274117 df.mm.trans2:probe4 -0.159870793636158 0.164737456200854 -0.970458068996996 0.332060634981128 df.mm.trans2:probe5 -0.194558544680773 0.164737456200854 -1.18102190702496 0.237884111422756 df.mm.trans2:probe6 -0.0324428353021736 0.164737456200854 -0.196936604767152 0.843918488717532 df.mm.trans3:probe2 0.0616070730137712 0.164737456200854 0.373971253621019 0.708507598863012 df.mm.trans3:probe3 0.169033527375226 0.164737456200854 1.02607829010747 0.305111015845593 df.mm.trans3:probe4 -0.0176626533271372 0.164737456200854 -0.107216984737231 0.914639057922146 df.mm.trans3:probe5 0.162503727599669 0.164737456200854 0.986440675650218 0.32416340783542 df.mm.trans3:probe6 0.0949969213977859 0.164737456200854 0.576656478669685 0.564305603224436 df.mm.trans3:probe7 -0.0723781631700031 0.164737456200854 -0.439354624255925 0.660502659320478 df.mm.trans3:probe8 0.171137006215837 0.164737456200854 1.03884696390589 0.299135328866977 df.mm.trans3:probe9 0.197352246365006 0.164737456200854 1.19798041633219 0.231217879093664 df.mm.trans3:probe10 0.0554853900083503 0.164737456200854 0.33681101607336 0.736332375015352 df.mm.trans3:probe11 0.247793094602603 0.164737456200854 1.50416972749952 0.132863856693228 df.mm.trans3:probe12 0.0276692812822146 0.164737456200854 0.167959867296234 0.86664993574414 df.mm.trans3:probe13 0.178508401789545 0.164737456200854 1.08359328780639 0.278814991328228 df.mm.trans3:probe14 0.307170283856954 0.164737456200854 1.86460499597882 0.0625392570023792 . df.mm.trans3:probe15 0.179886347415884 0.164737456200854 1.09195778279203 0.275123355905671