fitVsDatCorrelation=0.914794685976301 cont.fitVsDatCorrelation=0.258469526513050 fstatistic=11950.0102517478,43,485 cont.fstatistic=2079.91906697313,43,485 residuals=-0.463169481997669,-0.0860658862365574,0.00254870423399316,0.0820199779949687,0.434428238896324 cont.residuals=-0.600494176742345,-0.230101086184877,-0.0567870565939075,0.218851030610388,0.978780188056173 predictedValues: Include Exclude Both Lung 64.9749916659293 48.6775485366887 92.2624403985055 cerebhem 60.4514590164555 50.0377601817105 69.3784838437008 cortex 75.1832276303375 47.7110921864065 92.5832672808468 heart 69.9311752697134 46.564140469506 89.4145195880543 kidney 70.7915306063958 48.7776332935852 101.287673323083 liver 63.5083678739634 48.3220153298668 81.8177687034454 stomach 65.6691752397893 49.1513869044469 80.4922152831864 testicle 77.5706086252699 49.4627845539894 97.916648118544 diffExp=16.2974431292406,10.4136988347450,27.4721354439310,23.3670348002074,22.0138973128105,15.1863525440966,16.5177883353425,28.1078240712805 diffExpScore=0.993764659848669 diffExp1.5=0,0,1,1,0,0,0,1 diffExp1.5Score=0.75 diffExp1.4=0,0,1,1,1,0,0,1 diffExp1.4Score=0.8 diffExp1.3=1,0,1,1,1,1,1,1 diffExp1.3Score=0.875 diffExp1.2=1,1,1,1,1,1,1,1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 66.0159984429921 61.7274572908296 59.028752522471 cerebhem 63.6886382934275 64.5469993922867 66.5629489733429 cortex 60.8373084849339 64.7305948792905 67.4216617268019 heart 69.2979352183524 65.4317796773844 62.718538827208 kidney 65.5905011949069 64.5907764200004 63.6820732595636 liver 59.4017643050763 63.2691240594876 52.1068167971625 stomach 61.5331609068075 66.8421267734919 64.7078795379818 testicle 62.6918107210936 65.0077551752408 51.8158376911135 cont.diffExp=4.28854115216247,-0.85836109885922,-3.89328639435666,3.86615554096802,0.999724774906454,-3.8673597544113,-5.30896586668444,-2.3159444541472 cont.diffExpScore=3.13966886456268 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=-0.282961643906774 cont.tran.correlation=-0.0583332562105429 tran.covariance=-0.000582414876569189 cont.tran.covariance=-7.0966037344356e-05 tran.mean=58.5490560865034 cont.tran.mean=64.0752332022251 weightedLogRatios: wLogRatio Lung 1.16368913897708 cerebhem 0.757633074719153 cortex 1.86114366252183 heart 1.64468683793972 kidney 1.51724843754337 liver 1.09710833314838 stomach 1.1704198872726 testicle 1.85666019166270 cont.weightedLogRatios: wLogRatio Lung 0.279172346409676 cerebhem -0.0557011506113729 cortex -0.256758773844608 heart 0.241667092959673 kidney 0.0641364737920227 liver -0.259601782212891 stomach -0.344349352992235 testicle -0.150775369320904 varWeightedLogRatios=0.157940106399675 cont.varWeightedLogRatios=0.0555883225353843 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.43043383767158 0.072185377413328 47.5225587313781 1.28351500160189e-184 *** df.mm.trans1 0.821286984693777 0.0638104350143368 12.8707316367496 8.09162352525493e-33 *** df.mm.trans2 0.498446171890731 0.0600557863103526 8.29971935285122 1.04346333470501e-15 *** df.mm.exp2 0.240458617078726 0.0826664537373791 2.90878108600899 0.00379493218440956 ** df.mm.exp3 0.122400423012724 0.0826664537373791 1.48065409218562 0.139348085283417 df.mm.exp4 0.0604759632563362 0.0826664537373791 0.731565955985734 0.464786849610523 df.mm.exp5 -0.0055367072790919 0.0826664537373791 -0.0669764702460968 0.946628035703623 df.mm.exp6 0.0899812628895477 0.0826664537373791 1.08848582250071 0.276921274074962 df.mm.exp7 0.156790998476877 0.0826664537373791 1.89667018951826 0.0584653729082765 . df.mm.exp8 0.133709341591249 0.082666453737379 1.61745587897150 0.106430071031451 df.mm.trans1:exp2 -0.312620356649417 0.0769582802370588 -4.06220559615463 5.6684225162906e-05 *** df.mm.trans2:exp2 -0.212898601153545 0.0697104746397485 -3.05404033258657 0.00238198050095882 ** df.mm.trans1:exp3 0.0235252939742991 0.0769582802370588 0.305688925244078 0.759972666844474 df.mm.trans2:exp3 -0.142454419670680 0.0697104746397485 -2.04351527380727 0.0415412514624607 * df.mm.trans1:exp4 0.0130331324301824 0.0769582802370588 0.169353218263659 0.865589428931432 df.mm.trans2:exp4 -0.104863144291717 0.0697104746397485 -1.50426668063345 0.133163615515580 df.mm.trans1:exp5 0.09127362435803 0.0769582802370588 1.18601434539435 0.236197333062400 df.mm.trans2:exp5 0.00759067280874649 0.0697104746397485 0.108888554381157 0.913335920111304 df.mm.trans1:exp6 -0.112812040391809 0.0769582802370588 -1.46588567265676 0.143327446862605 df.mm.trans2:exp6 -0.097311910261491 0.0697104746397485 -1.39594387736394 0.163370053705223 df.mm.trans1:exp7 -0.146163809777244 0.0769582802370588 -1.89926034374738 0.0581233127982177 . df.mm.trans2:exp7 -0.147103842604828 0.0697104746397485 -2.11021146197949 0.0353516262768269 * df.mm.trans1:exp8 0.0434768067614616 0.0769582802370588 0.564939947040626 0.572375818813685 df.mm.trans2:exp8 -0.117706690086939 0.0697104746397484 -1.68850794224579 0.0919565661640911 . df.mm.trans1:probe2 0.112196247213629 0.0384791401185294 2.91576804647985 0.00371243026950114 ** df.mm.trans1:probe3 0.300794260485471 0.0384791401185294 7.81707334308714 3.39013829756156e-14 *** df.mm.trans1:probe4 0.177413437587775 0.0384791401185294 4.61063935008107 5.14123902706849e-06 *** df.mm.trans1:probe5 0.0334080845351482 0.0384791401185294 0.86821286630209 0.385707207377892 df.mm.trans1:probe6 0.176691858677737 0.0384791401185294 4.59188688035812 5.60444263969922e-06 *** df.mm.trans1:probe7 -0.330672649375891 0.0384791401185294 -8.5935561022752 1.16431215948977e-16 *** df.mm.trans1:probe8 -0.324934063694702 0.0384791401185294 -8.44442112515481 3.56803015203775e-16 *** df.mm.trans1:probe9 -0.292395141357993 0.0384791401185294 -7.59879613882515 1.55498495802983e-13 *** df.mm.trans1:probe10 -0.306997148399626 0.0384791401185294 -7.97827465618946 1.07826970821954e-14 *** df.mm.trans1:probe11 -0.209890631664685 0.0384791401185294 -5.45466013580727 7.83368439960368e-08 *** df.mm.trans1:probe12 -0.172657922716511 0.0384791401185294 -4.48705252208504 9.02843134976519e-06 *** df.mm.trans1:probe13 -0.406450252948170 0.0384791401185294 -10.5628725511059 1.29666078184544e-23 *** df.mm.trans2:probe2 -0.0867980138809855 0.0384791401185294 -2.25571604806180 0.0245331989557893 * df.mm.trans2:probe3 0.0193610398072198 0.0384791401185294 0.503156768773442 0.615082478204262 df.mm.trans2:probe4 -0.116057597123982 0.0384791401185294 -3.01611722004398 0.00269473575483093 ** df.mm.trans2:probe5 -0.147392041035830 0.0384791401185294 -3.83044009252313 0.000144707036617617 *** df.mm.trans2:probe6 -0.0620723007975621 0.0384791401185294 -1.61314157765369 0.107364190284322 df.mm.trans3:probe2 -0.543252876203361 0.0384791401185294 -14.1181137242140 3.68457990291252e-38 *** df.mm.trans3:probe3 -0.133336719274388 0.0384791401185294 -3.46516889056419 0.000576932288898556 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.27681822654346 0.172639686018106 24.7730885359402 3.65780753136315e-88 *** df.mm.trans1 -0.166555499095030 0.152610041816029 -1.09137968323088 0.275647720467948 df.mm.trans2 -0.0630739075135783 0.143630364815069 -0.439140481156537 0.660755325690422 df.mm.exp2 -0.111349587849547 0.197706393300873 -0.563206813853982 0.573554338113776 df.mm.exp3 -0.167130468988012 0.197706393300873 -0.845346810478049 0.398334069122418 df.mm.exp4 0.0461647981840975 0.197706393300873 0.233501797353832 0.81547029492688 df.mm.exp5 -0.0370018931036757 0.197706393300873 -0.187155774205873 0.851616764983856 df.mm.exp6 0.0438242838195721 0.197706393300873 0.221663463117652 0.824669173946365 df.mm.exp7 -0.082574528469901 0.197706393300873 -0.417662408843995 0.676378796103348 df.mm.exp8 0.130440250344237 0.197706393300873 0.659767487365627 0.509716223568152 df.mm.trans1:exp2 0.0754586584750684 0.184054635616079 0.409979668387533 0.682001890586742 df.mm.trans2:exp2 0.156014374306974 0.166720669548751 0.935783035956164 0.349850608606488 df.mm.trans1:exp3 0.0854365828618473 0.184054635616079 0.464191421073795 0.642718891597051 df.mm.trans2:exp3 0.214635586926972 0.166720669548751 1.28739638287147 0.198570168803124 df.mm.trans1:exp4 0.00235319943538672 0.184054635616079 0.0127853309834330 0.989804317150278 df.mm.trans2:exp4 0.0121144253032927 0.166720669548751 0.0726630077487204 0.942104241946101 df.mm.trans1:exp5 0.0305356664076953 0.184054635616079 0.165905445986103 0.868300496922934 df.mm.trans2:exp5 0.0823446690822195 0.166720669548751 0.493907979766967 0.621594770676246 df.mm.trans1:exp6 -0.149397469089940 0.184054635616079 -0.811701746005294 0.417360976517813 df.mm.trans2:exp6 -0.0191556899806095 0.166720669548751 -0.114896911297541 0.908574384626753 df.mm.trans1:exp7 0.0122536463985283 0.184054635616079 0.0665761357083573 0.946946579379528 df.mm.trans2:exp7 0.162179205824352 0.166720669548751 0.972760043870442 0.331157469990948 df.mm.trans1:exp8 -0.182106535048061 0.184054635616079 -0.98941563975557 0.322953173479353 df.mm.trans2:exp8 -0.0786625219170385 0.166720669548751 -0.471822252933293 0.637265858848856 df.mm.trans1:probe2 0.0618433398972353 0.0920273178080395 0.672010674332971 0.501896888107546 df.mm.trans1:probe3 0.199158598711630 0.0920273178080395 2.16412477789537 0.0309421595381721 * df.mm.trans1:probe4 0.152205781671132 0.0920273178080395 1.65391956754210 0.098790884195091 . df.mm.trans1:probe5 0.114163887324613 0.0920273178080395 1.24054346083136 0.215374220696390 df.mm.trans1:probe6 0.0209134019901994 0.0920273178080395 0.227252108268795 0.820323470878504 df.mm.trans1:probe7 0.156417074466098 0.0920273178080395 1.69968090119034 0.089832142768159 . df.mm.trans1:probe8 0.0529504045081492 0.0920273178080395 0.575377026836736 0.56530317731672 df.mm.trans1:probe9 0.132329796454459 0.0920273178080395 1.43794038125165 0.151095874542436 df.mm.trans1:probe10 0.134869892193850 0.0920273178080395 1.46554192174955 0.143421101518344 df.mm.trans1:probe11 0.101799753476422 0.0920273178080395 1.10619059537047 0.269192417628416 df.mm.trans1:probe12 0.0595251282553782 0.0920273178080395 0.64682020157908 0.518054303623574 df.mm.trans1:probe13 0.0879731147324466 0.0920273178080395 0.9559456564403 0.339575926699347 df.mm.trans2:probe2 -0.166105543722871 0.0920273178080395 -1.80495908909735 0.0717011632984217 . df.mm.trans2:probe3 -0.172666470322386 0.0920273178080395 -1.87625233936028 0.0612209304075886 . df.mm.trans2:probe4 -0.152878067667002 0.0920273178080395 -1.66122485484030 0.0973145314375343 . df.mm.trans2:probe5 -0.222989023875223 0.0920273178080395 -2.42307424780496 0.0157548774743205 * df.mm.trans2:probe6 -0.10450016302288 0.0920273178080395 -1.1355341599856 0.256712406717501 df.mm.trans3:probe2 0.0428712486654562 0.0920273178080395 0.465853506182606 0.641529497203705 df.mm.trans3:probe3 0.0496362597937672 0.0920273178080395 0.539364408047879 0.589882950433409