fitVsDatCorrelation=0.926744660230986 cont.fitVsDatCorrelation=0.214977231219879 fstatistic=9111.05223198174,69,1083 cont.fstatistic=1334.91170895958,69,1083 residuals=-0.90591437493794,-0.106409323734849,-0.00499641142816429,0.103023500034364,1.68576285025840 cont.residuals=-0.907505092535102,-0.383723325086916,-0.143380181972456,0.374826442152252,1.76023902329852 predictedValues: Include Exclude Both Lung 88.012873833104 198.249155509106 70.4187201943397 cerebhem 81.4120356233157 136.660023082780 65.979921565305 cortex 76.1233552768058 166.688554237161 63.8131279877242 heart 81.237170105296 188.984622751592 66.7416605265157 kidney 90.5598803304185 211.909950260286 72.8606530961953 liver 89.675830489479 214.402425539963 66.3370717194207 stomach 95.93525931305 184.527458091108 87.386813266542 testicle 86.8652474450121 175.553220983739 74.6243942516838 diffExp=-110.236281676002,-55.2479874594645,-90.5651989603554,-107.747452646296,-121.350069929867,-124.726595050484,-88.5921987780579,-88.6879735387269 diffExpScore=0.998731212038514 diffExp1.5=-1,-1,-1,-1,-1,-1,-1,-1 diffExp1.5Score=0.888888888888889 diffExp1.4=-1,-1,-1,-1,-1,-1,-1,-1 diffExp1.4Score=0.888888888888889 diffExp1.3=-1,-1,-1,-1,-1,-1,-1,-1 diffExp1.3Score=0.888888888888889 diffExp1.2=-1,-1,-1,-1,-1,-1,-1,-1 diffExp1.2Score=0.888888888888889 cont.predictedValues: Include Exclude Both Lung 92.8955440570356 108.795405032206 99.019695150147 cerebhem 90.808714856324 121.881002914870 94.7751252923787 cortex 91.3004944624221 106.963857811502 90.3756409834187 heart 81.8160378099556 114.370136286738 89.91605938233 kidney 93.2879960990715 117.762229481706 93.9305085883403 liver 95.573208325056 100.278849646514 104.623797566828 stomach 94.298314271635 100.402416440522 90.514133082384 testicle 87.2580879992868 106.885318575011 84.8925700332046 cont.diffExp=-15.8998609751701,-31.0722880585464,-15.6633633490795,-32.5540984767823,-24.4742333826341,-4.70564132145759,-6.10410216888711,-19.6272305757245 cont.diffExpScore=0.993381902155157 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,-1,0,-1,0,0,0,0 cont.diffExp1.3Score=0.666666666666667 cont.diffExp1.2=0,-1,0,-1,-1,0,0,-1 cont.diffExp1.2Score=0.8 tran.correlation=0.559115082737559 cont.tran.correlation=-0.380050411863092 tran.covariance=0.00601641731802298 cont.tran.covariance=-0.00137959850663208 tran.mean=135.424816429513 cont.tran.mean=100.286100879366 weightedLogRatios: wLogRatio Lung -3.96560780765573 cerebhem -2.41298288391036 cortex -3.70272794361017 heart -4.06908517544723 kidney -4.19216370025799 liver -4.29901927186201 stomach -3.19915114775012 testicle -3.38856720620915 cont.weightedLogRatios: wLogRatio Lung -0.728424303675271 cerebhem -1.37018451850174 cortex -0.72728295797902 heart -1.53145328737607 kidney -1.08384685743652 liver -0.220313770889925 stomach -0.287134729919889 testicle -0.9272535784919 varWeightedLogRatios=0.399272027365629 cont.varWeightedLogRatios=0.219723596933457 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 5.39815069711147 0.0871425200370575 61.9462312406837 0 *** df.mm.trans1 -1.07344605100710 0.0743197573582206 -14.4436161952615 2.24158047703876e-43 *** df.mm.trans2 -0.0626680769284512 0.0647360789650856 -0.968054876512527 0.333233094903002 df.mm.exp2 -0.384879657364905 0.0811614422219072 -4.7421490652247 2.39679590921889e-06 *** df.mm.exp3 -0.220025248672067 0.0811614422219071 -2.71095784708318 0.00681500864602507 ** df.mm.exp4 -0.0743393589989732 0.0811614422219071 -0.915944282948036 0.359900020699522 df.mm.exp5 0.0610754008236004 0.0811614422219071 0.752517441183603 0.451903472908133 df.mm.exp6 0.156758576269090 0.0811614422219072 1.93144148228034 0.0536891581747082 . df.mm.exp7 -0.201421093205547 0.0811614422219071 -2.4817337850507 0.0132252850489216 * df.mm.exp8 -0.192715724537390 0.0811614422219071 -2.37447387899389 0.0177474692668810 * df.mm.trans1:exp2 0.306919679887459 0.0737895263964763 4.15939354642768 3.44336062926487e-05 *** df.mm.trans2:exp2 0.0128513148453519 0.0489775412328933 0.262391996859185 0.793069143886719 df.mm.trans1:exp3 0.0748972715731743 0.0737895263964763 1.01501222776178 0.310326700699161 df.mm.trans2:exp3 0.0466277744478844 0.0489775412328932 0.952023586201776 0.341297439368543 df.mm.trans1:exp4 -0.00577083599241334 0.0737895263964763 -0.0782067086513909 0.93767807222028 df.mm.trans2:exp4 0.0264804088671306 0.0489775412328932 0.540664316757216 0.588850153136698 df.mm.trans1:exp5 -0.0325472051456742 0.0737895263964763 -0.441081637667598 0.659241934439619 df.mm.trans2:exp5 0.00556141990910362 0.0489775412328932 0.113550410435234 0.90961524496139 df.mm.trans1:exp6 -0.138040389126224 0.0737895263964763 -1.87073146918606 0.0616518279921744 . df.mm.trans2:exp6 -0.0784284347624277 0.0489775412328933 -1.60131425114814 0.109598961088489 df.mm.trans1:exp7 0.287611577683374 0.0737895263964764 3.89772901018522 0.000103062237458718 *** df.mm.trans2:exp7 0.12969476917613 0.0489775412328932 2.64804573507311 0.00821351299659908 ** df.mm.trans1:exp8 0.179590665158655 0.0737895263964764 2.43382325282455 0.0151011403262500 * df.mm.trans2:exp8 0.0711333741610674 0.0489775412328932 1.45236719464582 0.146689178919313 df.mm.trans1:probe2 -0.0976196379784766 0.0560471686951282 -1.74174075606717 0.081837732263222 . df.mm.trans1:probe3 -0.24246951630945 0.0560471686951282 -4.32616886730491 1.65739237809172e-05 *** df.mm.trans1:probe4 -0.183190913813935 0.0560471686951282 -3.26851325551184 0.00111512979497091 ** df.mm.trans1:probe5 -0.286480369194924 0.0560471686951282 -5.11141554274134 3.77804101908907e-07 *** df.mm.trans1:probe6 -0.389222405125109 0.0560471686951282 -6.94455070946235 6.53503839411522e-12 *** df.mm.trans1:probe7 -0.0486196926889887 0.0560471686951282 -0.86747812281934 0.38587225897956 df.mm.trans1:probe8 -0.157604554120300 0.0560471686951282 -2.8119984967947 0.00501235942589618 ** df.mm.trans1:probe9 0.97547521391981 0.0560471686951282 17.4045404367518 5.1729880222928e-60 *** df.mm.trans1:probe10 -0.151493127555034 0.0560471686951282 -2.7029577243962 0.00698007770484763 ** df.mm.trans1:probe11 0.918696170220154 0.0560471686951282 16.3914822391378 4.13737249363902e-54 *** df.mm.trans1:probe12 1.12753004896596 0.0560471686951282 20.1175202105075 9.9557863237083e-77 *** df.mm.trans1:probe13 1.09751075421549 0.0560471686951282 19.5819125170348 2.46638541947756e-73 *** df.mm.trans1:probe14 1.05129160676116 0.0560471686951282 18.7572651971007 3.40079789697841e-68 *** df.mm.trans1:probe15 0.784043473567936 0.0560471686951282 13.9889934107606 5.3394242681638e-41 *** df.mm.trans1:probe16 0.869748446510872 0.0560471686951282 15.5181513493022 3.42764703295676e-49 *** df.mm.trans1:probe17 0.121093236398078 0.0560471686951282 2.16055938626929 0.0309481541515115 * df.mm.trans1:probe18 0.208383211216895 0.0560471686951282 3.71799710972748 0.000211090956741476 *** df.mm.trans1:probe19 0.096973812484598 0.0560471686951282 1.73021786367288 0.0838762353113415 . df.mm.trans1:probe20 0.059109061674737 0.0560471686951282 1.05463064506013 0.291829501206162 df.mm.trans1:probe21 0.269975533295144 0.0560471686951282 4.81693437118459 1.66511125410156e-06 *** df.mm.trans1:probe22 0.3935645992982 0.0560471686951282 7.02202463498231 3.85459340788199e-12 *** df.mm.trans2:probe2 -0.275060562642591 0.0560471686951282 -4.90766204692334 1.06314307904305e-06 *** df.mm.trans2:probe3 -0.12730678293657 0.0560471686951282 -2.27142219492054 0.0233169906701261 * df.mm.trans2:probe4 -0.283974127542299 0.0560471686951282 -5.06669889226684 4.75626828364237e-07 *** df.mm.trans2:probe5 -0.309136490369303 0.0560471686951282 -5.51564865035144 4.34480539248332e-08 *** df.mm.trans2:probe6 -0.199430541018939 0.0560471686951282 -3.55826254317597 0.000389481996731530 *** df.mm.trans3:probe2 0.0417655714273714 0.0560471686951282 0.745186106626681 0.456320905375912 df.mm.trans3:probe3 0.089183140540754 0.0560471686951282 1.59121580299392 0.111852848645175 df.mm.trans3:probe4 -0.148464331425487 0.0560471686951282 -2.64891759712372 0.00819249324019737 ** df.mm.trans3:probe5 -0.182223408582001 0.0560471686951282 -3.25125091640607 0.00118439753938677 ** df.mm.trans3:probe6 -0.289249116901104 0.0560471686951282 -5.16081585627441 2.92338680123149e-07 *** df.mm.trans3:probe7 -0.205133916264855 0.0560471686951282 -3.66002281722191 0.000264352510205402 *** df.mm.trans3:probe8 0.553822284957086 0.0560471686951282 9.88136060841242 4.17701864801879e-22 *** df.mm.trans3:probe9 -0.23236503405001 0.0560471686951282 -4.1458835380958 3.64944316366976e-05 *** df.mm.trans3:probe10 0.225911233866353 0.0560471686951282 4.03073409640386 5.9492937716141e-05 *** df.mm.trans3:probe11 0.0945290400242982 0.0560471686951282 1.68659795356469 0.091968687327666 . df.mm.trans3:probe12 -0.147586317003546 0.0560471686951282 -2.63325196329452 0.00857761983914469 ** df.mm.trans3:probe13 -0.0803387036579408 0.0560471686951282 -1.43341234764146 0.152028653542192 df.mm.trans3:probe14 0.00692134692196047 0.0560471686951282 0.123491464120329 0.90174084711938 df.mm.trans3:probe15 -0.259023351220994 0.0560471686951282 -4.62152428483883 4.26732282753084e-06 *** df.mm.trans3:probe16 -0.188924608800780 0.0560471686951282 -3.37081449784638 0.000775911893951048 *** df.mm.trans3:probe17 -0.191938173524804 0.0560471686951282 -3.42458286463788 0.000638808818540702 *** df.mm.trans3:probe18 0.515279952719385 0.0560471686951282 9.19368390439632 1.89054997627777e-19 *** df.mm.trans3:probe19 -0.0197054827502915 0.0560471686951282 -0.351587479065724 0.725216048514229 df.mm.trans3:probe20 0.265991283548562 0.0560471686951282 4.745846931099 2.35429442980573e-06 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.62708902026766 0.226528884121507 20.4260442910484 1.05748625730511e-78 *** df.mm.trans1 -0.0702857715567935 0.193195832475116 -0.363805837094578 0.716074011583764 df.mm.trans2 0.113369586270726 0.168282851174449 0.673684724732897 0.500655523329145 df.mm.exp2 0.134667450146811 0.210980941707932 0.638292013755612 0.523418553560019 df.mm.exp3 0.0570464215447767 0.210980941707932 0.270386609723962 0.786914357674541 df.mm.exp4 0.0194107136300379 0.210980941707932 0.0920022134364574 0.926713295593315 df.mm.exp5 0.136177780244550 0.210980941707932 0.645450622895905 0.518771925239292 df.mm.exp6 -0.108149709849344 0.210980941707932 -0.512604166868583 0.608332766305158 df.mm.exp7 0.0245175743422158 0.210980941707932 0.116207531086653 0.907509612351034 df.mm.exp8 0.0736141425895056 0.210980941707932 0.348913707530096 0.727221916108525 df.mm.trans1:exp2 -0.157387870280362 0.191817485509255 -0.820508463357835 0.412106863506743 df.mm.trans2:exp2 -0.0210913677257789 0.127318188156417 -0.165658717196534 0.86845645410801 df.mm.trans1:exp3 -0.0743658978888345 0.191817485509255 -0.387690922396366 0.698320956770797 df.mm.trans2:exp3 -0.074024521975251 0.127318188156416 -0.581413567433966 0.561082741415913 df.mm.trans1:exp4 -0.146413107721455 0.191817485509255 -0.763293853700272 0.445454402486053 df.mm.trans2:exp4 0.0305601844223835 0.127318188156416 0.240029997794493 0.810352424976727 df.mm.trans1:exp5 -0.131962019571517 0.191817485509255 -0.687956153846829 0.491627709554822 df.mm.trans2:exp5 -0.0569792933939472 0.127318188156416 -0.447534592025025 0.654578615129722 df.mm.trans1:exp6 0.136566563255107 0.191817485509255 0.711960971089457 0.476642280003846 df.mm.trans2:exp6 0.0266354112886132 0.127318188156416 0.209203505597255 0.834328718977148 df.mm.trans1:exp7 -0.00952994082029512 0.191817485509255 -0.0496823362843806 0.96038469357513 df.mm.trans2:exp7 -0.104800399611652 0.127318188156416 -0.823137692494493 0.410610907660884 df.mm.trans1:exp8 -0.136219566400066 0.191817485509255 -0.710151976178905 0.477762778977904 df.mm.trans2:exp8 -0.0913267722928875 0.127318188156416 -0.717311278265194 0.473336728706638 df.mm.trans1:probe2 -0.109545986381149 0.145695839152667 -0.751881364754428 0.452285773534189 df.mm.trans1:probe3 -0.0798433983067116 0.145695839152667 -0.548014265685705 0.58379503895437 df.mm.trans1:probe4 -0.07794530516465 0.145695839152667 -0.534986487040135 0.592769024221013 df.mm.trans1:probe5 -0.177436163279840 0.145695839152667 -1.21785333274970 0.223544977442010 df.mm.trans1:probe6 -0.120863516668949 0.145695839152667 -0.82956052397833 0.40697011167971 df.mm.trans1:probe7 0.0339254681227221 0.145695839152667 0.232851317649321 0.81592086051017 df.mm.trans1:probe8 -0.137810091187459 0.145695839152667 -0.945875269938593 0.344423191463294 df.mm.trans1:probe9 0.0978007511919605 0.145695839152667 0.67126660418545 0.50219384957998 df.mm.trans1:probe10 -0.172595082503200 0.145695839152667 -1.18462602300088 0.236425244854625 df.mm.trans1:probe11 -0.0895377979485012 0.145695839152667 -0.61455288269886 0.538979124364705 df.mm.trans1:probe12 -0.0257832134901411 0.145695839152667 -0.176966024837018 0.859568165460327 df.mm.trans1:probe13 -0.142418109840576 0.145695839152667 -0.97750293123569 0.32853852273767 df.mm.trans1:probe14 -0.0774636924307787 0.145695839152667 -0.53168088314182 0.595056071571961 df.mm.trans1:probe15 0.0723423598698804 0.145695839152667 0.496530033325636 0.61962126742135 df.mm.trans1:probe16 -0.129748240833987 0.145695839152667 -0.890541841061294 0.373372799218639 df.mm.trans1:probe17 -0.00793852796004605 0.145695839152667 -0.0544869915724063 0.95655722174109 df.mm.trans1:probe18 0.0660893554704587 0.145695839152667 0.453611824845643 0.650199118776696 df.mm.trans1:probe19 0.0395386873520678 0.145695839152667 0.271378287684916 0.786151817721777 df.mm.trans1:probe20 -0.0415712553781243 0.145695839152667 -0.285329050025677 0.775446616600165 df.mm.trans1:probe21 0.0242991241381136 0.145695839152667 0.166779808396943 0.867574439576727 df.mm.trans1:probe22 -0.00725326200824311 0.145695839152667 -0.0497835905982379 0.960304022886585 df.mm.trans2:probe2 -0.0898666744072743 0.145695839152667 -0.616810163762518 0.537489587843383 df.mm.trans2:probe3 -0.364743695129313 0.145695839152667 -2.50345992892162 0.0124448525731272 * df.mm.trans2:probe4 -0.251749137432726 0.145695839152667 -1.72790890183851 0.0842896216283608 . df.mm.trans2:probe5 -0.30328609940092 0.145695839152667 -2.08163871504334 0.0376098914546684 * df.mm.trans2:probe6 -0.316081554004517 0.145695839152667 -2.16946177627840 0.0302645853520340 * df.mm.trans3:probe2 -0.0974854648749152 0.145695839152667 -0.66910260060869 0.503572635368772 df.mm.trans3:probe3 -0.100491325281646 0.145695839152667 -0.689733666150521 0.490509451881753 df.mm.trans3:probe4 0.0336303593920599 0.145695839152667 0.230825805236760 0.817493729997859 df.mm.trans3:probe5 -0.170988116496069 0.145695839152667 -1.1735964286317 0.240814741523428 df.mm.trans3:probe6 -0.0171360500190746 0.145695839152667 -0.117615232656841 0.906394343380145 df.mm.trans3:probe7 -0.103282423123401 0.145695839152667 -0.708890684346699 0.478544881138682 df.mm.trans3:probe8 -0.112102109455544 0.145695839152667 -0.769425606849884 0.441808467777133 df.mm.trans3:probe9 -0.193591591321968 0.145695839152667 -1.32873795468595 0.184214326745092 df.mm.trans3:probe10 -0.0425790395817317 0.145695839152667 -0.292246091785197 0.770154447823044 df.mm.trans3:probe11 -0.0561225280798963 0.145695839152667 -0.385203368924546 0.700162387390505 df.mm.trans3:probe12 -0.163180997571194 0.145695839152667 -1.12001137795160 0.262957231653187 df.mm.trans3:probe13 -0.185113837886164 0.145695839152667 -1.27054992759397 0.204161677366464 df.mm.trans3:probe14 -0.0192148632737205 0.145695839152667 -0.131883404395552 0.895101011772314 df.mm.trans3:probe15 -0.0199228336623388 0.145695839152667 -0.136742639859898 0.89125963934227 df.mm.trans3:probe16 -0.0320506038801837 0.145695839152667 -0.219982973203507 0.825925872939876 df.mm.trans3:probe17 -0.00543846337185799 0.145695839152667 -0.0373275132871797 0.970230747459906 df.mm.trans3:probe18 0.0966585382799118 0.145695839152667 0.663426895661915 0.507198374093148 df.mm.trans3:probe19 -0.0841956903542149 0.145695839152667 -0.577886718274709 0.563460732761139 df.mm.trans3:probe20 -0.224474233888898 0.145695839152667 -1.54070449227917 0.123680841080749