fitVsDatCorrelation=0.905147013878044 cont.fitVsDatCorrelation=0.234062454910537 fstatistic=10251.1461686373,53,715 cont.fstatistic=1948.93226720223,53,715 residuals=-0.525206422120638,-0.0892410342013044,-0.00331588784392803,0.0816097246296618,0.881150081755339 cont.residuals=-0.623568060144214,-0.246086609022478,-0.0934576737144512,0.196252090178103,1.56276558345995 predictedValues: Include Exclude Both Lung 57.2219006747372 44.1609006808973 65.3188499734675 cerebhem 55.1449711588717 47.3439023023684 52.5432198451637 cortex 59.5258581897285 43.1880009861409 66.8240387481188 heart 63.507226480711 46.8286152330374 74.2889683752979 kidney 56.6548796379342 43.5194753269263 65.5423554989633 liver 55.8455059624615 47.4774640311444 63.7115282256128 stomach 68.1081226599886 46.2698923591169 63.1859270330867 testicle 57.026305124325 45.0054101341826 61.1010259172531 diffExp=13.0609999938399,7.80106885650329,16.3378572035876,16.6786112476735,13.1354043110080,8.3680419313171,21.8382303008717,12.0208949901424 diffExpScore=0.990928973678075 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,1,0 diffExp1.4Score=0.5 diffExp1.3=0,0,1,1,1,0,1,0 diffExp1.3Score=0.8 diffExp1.2=1,0,1,1,1,0,1,1 diffExp1.2Score=0.857142857142857 cont.predictedValues: Include Exclude Both Lung 55.0493869700262 63.1276945907924 55.5597818004358 cerebhem 57.345702666303 55.2148844713997 66.5349424504409 cortex 61.1558531436427 54.5514674658008 65.4275130780913 heart 55.1947412163975 60.9268369225298 63.2243577106513 kidney 62.3786341722899 52.9414935002425 59.342590141742 liver 59.6792454178116 57.8346797978221 69.1720407065287 stomach 57.5153787815738 62.0112743510615 60.8000303512698 testicle 59.1500668800514 56.8785468220701 55.4298222086866 cont.diffExp=-8.0783076207662,2.1308181949033,6.60438567784197,-5.73209570613231,9.43714067204737,1.84456561998954,-4.49589556948772,2.27152005798138 cont.diffExpScore=8.14806484610826 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.119028384576085 cont.tran.correlation=-0.836986551044754 tran.covariance=0.000304562444959837 cont.tran.covariance=-0.00243828855534819 tran.mean=52.3017769339107 cont.tran.mean=58.1847429481134 weightedLogRatios: wLogRatio Lung 1.01498317703788 cerebhem 0.599997797478461 cortex 1.25964542199043 heart 1.2182787426999 kidney 1.03004480417140 liver 0.639826418414808 stomach 1.55716531127534 testicle 0.92920000271284 cont.weightedLogRatios: wLogRatio Lung -0.558217162583191 cerebhem 0.15260360069756 cortex 0.463556163289859 heart -0.40117938717375 kidney 0.664541083658582 liver 0.127883759943762 stomach -0.307805359552475 testicle 0.159007005951652 varWeightedLogRatios=0.101943169757015 cont.varWeightedLogRatios=0.182491529314678 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.0168487439898 0.0782335115641412 38.5621031661909 8.20902611480928e-177 *** df.mm.trans1 0.780879150433273 0.0694728723444799 11.2400585160968 4.17133103674579e-27 *** df.mm.trans2 0.763472702764008 0.0631946116804512 12.0812943138977 1.03635987833650e-30 *** df.mm.exp2 0.250271683025071 0.0851957274476269 2.93760838158137 0.00341392285881441 ** df.mm.exp3 -0.0055852057626107 0.085195727447627 -0.0655573457723468 0.947748574346925 df.mm.exp4 0.0341898485898577 0.085195727447627 0.401309427293469 0.688312231008888 df.mm.exp5 -0.0280057553111633 0.0851957274476269 -0.32872253280987 0.742461675287235 df.mm.exp6 0.0729828502803748 0.0851957274476269 0.85664918261588 0.391925807665062 df.mm.exp7 0.254010515498754 0.0851957274476269 2.98149359256195 0.00296589708247966 ** df.mm.exp8 0.082270865967498 0.0851957274476269 0.965668918292565 0.33453637767976 df.mm.trans1:exp2 -0.287242830307708 0.0808973401904414 -3.55070796680714 0.000409368591070322 *** df.mm.trans2:exp2 -0.180673448553286 0.0681216567280562 -2.65221747724868 0.00817380935057538 ** df.mm.trans1:exp3 0.0450593112954109 0.0808973401904414 0.556993730440782 0.577706017183117 df.mm.trans2:exp3 -0.0166918901333162 0.0681216567280562 -0.245030595775888 0.806503048488525 df.mm.trans1:exp4 0.0700271496442865 0.0808973401904414 0.865629815262587 0.386983552751759 df.mm.trans2:exp4 0.0244648064714084 0.0681216567280562 0.359134049969933 0.719600839178815 df.mm.trans1:exp5 0.0180471716322988 0.0808973401904414 0.223087330063186 0.823531256194268 df.mm.trans2:exp5 0.0133745042646519 0.0681216567280562 0.196332633512473 0.844405608973678 df.mm.trans1:exp6 -0.0973304982428433 0.0808973401904414 -1.20313595000424 0.229321938209239 df.mm.trans2:exp6 -0.000567490886826788 0.0681216567280562 -0.00833055028435713 0.993355583158178 df.mm.trans1:exp7 -0.0798507380142605 0.0808973401904414 -0.987062588538548 0.323945855304687 df.mm.trans2:exp7 -0.207358836561502 0.0681216567280562 -3.04394881923212 0.00242058337011766 ** df.mm.trans1:exp8 -0.0856949152143617 0.0808973401904414 -1.05930448408596 0.289818852567327 df.mm.trans2:exp8 -0.0633279558340921 0.0681216567280562 -0.929630294913398 0.352876279421486 df.mm.trans1:probe2 0.087922363874971 0.044309298064474 1.98428699427908 0.047605752517638 * df.mm.trans1:probe3 0.104529231250912 0.044309298064474 2.35908118198606 0.0185882392008893 * df.mm.trans1:probe4 0.143892718633555 0.044309298064474 3.24746102780004 0.00121876710624857 ** df.mm.trans1:probe5 -0.0551160275672434 0.044309298064474 -1.24389304220177 0.213946577061121 df.mm.trans1:probe6 0.51343775040349 0.044309298064474 11.5875848373042 1.41955549032829e-28 *** df.mm.trans1:probe7 0.53594464420742 0.044309298064474 12.0955345180050 8.97467876069202e-31 *** df.mm.trans1:probe8 0.396022320876008 0.044309298064474 8.93767985897136 3.34567509337666e-18 *** df.mm.trans1:probe9 0.04566499907664 0.044309298064474 1.03059630983532 0.303078653183299 df.mm.trans1:probe10 0.218627414926684 0.044309298064474 4.93412047757023 1.00237957971204e-06 *** df.mm.trans1:probe11 0.594499102953385 0.044309298064474 13.4170282293422 9.02210849994969e-37 *** df.mm.trans1:probe12 1.04289886783519 0.044309298064474 23.5367950608849 3.82891579748917e-91 *** df.mm.trans1:probe13 0.578404405557544 0.044309298064474 13.053793014638 4.38258478421097e-35 *** df.mm.trans1:probe14 0.746235517848452 0.044309298064474 16.8415107087143 7.45930821284938e-54 *** df.mm.trans1:probe15 0.589590131215676 0.044309298064474 13.3062394795280 2.96885682323214e-36 *** df.mm.trans1:probe16 0.88111225760969 0.044309298064474 19.8854934765067 2.23186928406924e-70 *** df.mm.trans1:probe17 0.0642564864674365 0.044309298064474 1.45018064546944 0.147446661451791 df.mm.trans1:probe18 0.0086497006231246 0.044309298064474 0.195211862994049 0.845282551067987 df.mm.trans1:probe19 -0.0103112486258730 0.044309298064474 -0.232710719336361 0.816052642093302 df.mm.trans1:probe20 -0.0469011161843182 0.044309298064474 -1.05849377519077 0.290187850118633 df.mm.trans1:probe21 -0.0564638132850014 0.044309298064474 -1.27431071471368 0.202967331295599 df.mm.trans1:probe22 0.0965333422199249 0.044309298064474 2.17862494863855 0.0296854390788075 * df.mm.trans2:probe2 0.0552842609827146 0.044309298064474 1.24768983932607 0.212553136559146 df.mm.trans2:probe3 -0.0344518274180362 0.044309298064474 -0.777530426410855 0.437103074221347 df.mm.trans2:probe4 0.0383793241636829 0.044309298064474 0.866168633676785 0.386688244639598 df.mm.trans2:probe5 0.00618792391843742 0.044309298064474 0.139652943935908 0.88897353512586 df.mm.trans2:probe6 0.00978382696011664 0.044309298064474 0.220807536735976 0.825305332069927 df.mm.trans3:probe2 -0.444373089282353 0.044309298064474 -10.0288902937652 3.09230123095725e-22 *** df.mm.trans3:probe3 -0.492831017572475 0.044309298064474 -11.1225191799554 1.28797871381089e-26 *** df.mm.trans3:probe4 -0.590475634264375 0.044309298064474 -13.3262240671287 2.39588974416168e-36 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.21567178685234 0.178923886138802 23.5612576823980 2.76644668100083e-91 *** df.mm.trans1 -0.173101845688771 0.158887873656393 -1.08945913684462 0.276318512550195 df.mm.trans2 -0.089541436454985 0.144529182940083 -0.619538799247942 0.535758835815993 df.mm.exp2 -0.273327497733512 0.194846816058536 -1.40278144268674 0.161116083464673 df.mm.exp3 -0.204303380596699 0.194846816058536 -1.04853332853703 0.294747248611475 df.mm.exp4 -0.162078913081205 0.194846816058536 -0.831827362436926 0.405784116833128 df.mm.exp5 -0.116847749735768 0.194846816058536 -0.599690321347947 0.54890262738767 df.mm.exp6 -0.225954550581109 0.194846816058536 -1.15965225992314 0.246577516433423 df.mm.exp7 -0.0641524160727743 0.194846816058536 -0.329245390663718 0.742066637345302 df.mm.exp8 -0.0300525076927534 0.194846816058536 -0.154236585953373 0.877466719902833 df.mm.trans1:exp2 0.314194679558446 0.185016193134821 1.69820097492489 0.0899049247045424 . df.mm.trans2:exp2 0.139400487618275 0.155797577129134 0.894753886337604 0.371219763003936 df.mm.trans1:exp3 0.309498228721363 0.185016193134822 1.67281697605696 0.094800779496085 . df.mm.trans2:exp3 0.0582884205405638 0.155797577129134 0.374129184899012 0.708419126488366 df.mm.trans1:exp4 0.164715866776417 0.185016193134821 0.890278110178108 0.373616027748953 df.mm.trans2:exp4 0.126593089421117 0.155797577129134 0.81254851168956 0.416747417225198 df.mm.trans1:exp5 0.241839838162731 0.185016193134821 1.30712795493799 0.191589463444528 df.mm.trans2:exp5 -0.0591244159474406 0.155797577129134 -0.379495092522748 0.704432929756985 df.mm.trans1:exp6 0.306708135362573 0.185016193134821 1.65773671031635 0.0978092618608387 . df.mm.trans2:exp6 0.138383569564331 0.155797577129134 0.888226711315484 0.37471751550244 df.mm.trans1:exp7 0.107974057955976 0.185016193134821 0.583592474401932 0.559678567189996 df.mm.trans2:exp7 0.0463090556868543 0.155797577129134 0.297238612693384 0.766370678538146 df.mm.trans1:exp8 0.101899501571395 0.185016193134821 0.550759908334837 0.581970309192847 df.mm.trans2:exp8 -0.074188828545104 0.155797577129134 -0.476187306068387 0.634086413771117 df.mm.trans1:probe2 -0.110418232017595 0.101337542483674 -1.08960834564726 0.276252797595078 df.mm.trans1:probe3 -0.0136089437771528 0.101337542483674 -0.134293209047824 0.893208514785521 df.mm.trans1:probe4 -0.0195544744679831 0.101337542483674 -0.192963772247915 0.847042138216113 df.mm.trans1:probe5 -0.00526894039254016 0.101337542483674 -0.0519939625868568 0.958548026392894 df.mm.trans1:probe6 -0.147817192429801 0.101337542483674 -1.45866170430978 0.145097375139495 df.mm.trans1:probe7 -0.00845060923585412 0.101337542483674 -0.0833907062352094 0.93356421887575 df.mm.trans1:probe8 -0.0897505242996796 0.101337542483674 -0.885659175267041 0.376098971696815 df.mm.trans1:probe9 -0.085497847408567 0.101337542483674 -0.843693712252209 0.399122753887615 df.mm.trans1:probe10 -0.0199013456297362 0.101337542483674 -0.196386700742643 0.844363309177323 df.mm.trans1:probe11 -0.131803636939496 0.101337542483674 -1.3006397600448 0.193800827563593 df.mm.trans1:probe12 0.0615038757285666 0.101337542483674 0.606920931978147 0.54409605559514 df.mm.trans1:probe13 0.0466853649735304 0.101337542483674 0.460691702495663 0.645159894778788 df.mm.trans1:probe14 -0.0519014501155934 0.101337542483674 -0.512164088881027 0.60869433299567 df.mm.trans1:probe15 0.0140703343928614 0.101337542483674 0.138846216792046 0.889610768414641 df.mm.trans1:probe16 -0.169405225251735 0.101337542483674 -1.67169265308587 0.095022485629169 . df.mm.trans1:probe17 -0.0212103300121993 0.101337542483674 -0.209303773235041 0.834270724812723 df.mm.trans1:probe18 -0.0197742937833297 0.101337542483674 -0.195132951704601 0.845344302121505 df.mm.trans1:probe19 0.0274569150476743 0.101337542483674 0.27094514406739 0.786511422021383 df.mm.trans1:probe20 -0.00968207068977938 0.101337542483674 -0.0955427816037595 0.923910481546349 df.mm.trans1:probe21 -0.053688069381735 0.101337542483674 -0.529794467735236 0.596418907581996 df.mm.trans1:probe22 -0.0848028665647872 0.101337542483674 -0.836835633530873 0.402964565730955 df.mm.trans2:probe2 0.138783094125907 0.101337542483674 1.36951312144032 0.171268905923544 df.mm.trans2:probe3 0.050382583000697 0.101337542483674 0.497175891243009 0.619217863937412 df.mm.trans2:probe4 -0.0144651963583331 0.101337542483674 -0.142742719073373 0.8865335920547 df.mm.trans2:probe5 -0.0207126123562632 0.101337542483674 -0.204392289852500 0.838105119990392 df.mm.trans2:probe6 0.0363043603273196 0.101337542483674 0.35825183281081 0.720260603522666 df.mm.trans3:probe2 0.142455551908464 0.101337542483674 1.40575297581756 0.160231877934109 df.mm.trans3:probe3 0.112423455179450 0.101337542483674 1.10939591018365 0.267632415391447 df.mm.trans3:probe4 0.00284533647958568 0.101337542483674 0.0280778121301301 0.977607925329021