fitVsDatCorrelation=0.901062278875184 cont.fitVsDatCorrelation=0.239771661342237 fstatistic=9320.64024223891,65,991 cont.fstatistic=1847.81901372204,65,991 residuals=-0.804716421641997,-0.106077455988801,-0.00158445792554234,0.107650145183209,1.20852750609416 cont.residuals=-0.841461490860726,-0.325623486431221,-0.0431695150649382,0.288265480867113,1.63203793230929 predictedValues: Include Exclude Both Lung 92.2424789963395 64.8190905858645 91.0024708763459 cerebhem 99.7750366027026 105.834477028986 88.2643327083242 cortex 93.8049581612247 56.0447234564584 120.158843877694 heart 91.0646626961824 55.0840893588492 111.622061195436 kidney 107.565918087989 63.6599884889407 115.170357064080 liver 107.955729621902 59.04650276369 111.265128475195 stomach 99.215879151531 61.6469036773799 112.304359977242 testicle 92.744951531808 68.0979223782512 110.189535400484 diffExp=27.4233884104751,-6.05944042628344,37.7602347047663,35.9805733373332,43.9059295990482,48.9092268582118,37.5689754741512,24.6470291535568 diffExpScore=1.04427435541863 diffExp1.5=0,0,1,1,1,1,1,0 diffExp1.5Score=0.833333333333333 diffExp1.4=1,0,1,1,1,1,1,0 diffExp1.4Score=0.857142857142857 diffExp1.3=1,0,1,1,1,1,1,1 diffExp1.3Score=0.875 diffExp1.2=1,0,1,1,1,1,1,1 diffExp1.2Score=0.875 cont.predictedValues: Include Exclude Both Lung 101.528402618541 99.492036315728 98.8546675781465 cerebhem 93.7321150234665 110.670956781682 99.038950856094 cortex 91.1260498347274 98.3150897439434 102.757141787745 heart 103.131674014548 96.2806908412461 90.7185072102255 kidney 91.2094991986285 101.309277386632 93.4617665458334 liver 89.1200802962841 103.016499557859 93.2508169960493 stomach 97.6378917892275 83.4484785949658 101.641300094384 testicle 100.594779380059 102.263638716287 101.166775794423 cont.diffExp=2.03636630281265,-16.9388417582151,-7.18903990921605,6.85098317330213,-10.0997781880034,-13.8964192615750,14.1894131942617,-1.66885933622848 cont.diffExpScore=2.62913980970902 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.111596340461793 cont.tran.correlation=-0.304746813765164 tran.covariance=0.00188223399568104 cont.tran.covariance=-0.00136078653203744 tran.mean=82.4127070367562 cont.tran.mean=97.679822505864 weightedLogRatios: wLogRatio Lung 1.53406758660526 cerebhem -0.27311834767956 cortex 2.20638722861969 heart 2.1416482618863 kidney 2.31631309740121 liver 2.64288815681153 stomach 2.07451099911919 testicle 1.35158977946078 cont.weightedLogRatios: wLogRatio Lung 0.0934073531966371 cerebhem -0.768058657404371 cortex -0.345514834571278 heart 0.316310888793861 kidney -0.479481672048437 liver -0.661117586620589 stomach 0.70709452029593 testicle -0.0760055355655034 varWeightedLogRatios=0.840472302352002 cont.varWeightedLogRatios=0.258111252361581 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.943904236293 0.0877083316176898 44.9661299394454 1.59950068262027e-241 *** df.mm.trans1 0.449802589895609 0.0756143640869386 5.94863945927579 3.74553197816344e-09 *** df.mm.trans2 0.227837627668585 0.0659490798446492 3.45475066832295 0.00057413457653763 *** df.mm.exp2 0.59932400080469 0.0836773533573992 7.1623202307186 1.54524765146035e-12 *** df.mm.exp3 -0.406581108063309 0.0836773533573992 -4.85891453003702 1.37132903470412e-06 *** df.mm.exp4 -0.379822223270191 0.0836773533573993 -4.5391280678765 6.34184356245057e-06 *** df.mm.exp5 -0.0998865660490742 0.0836773533573992 -1.19371086729336 0.232876759341186 df.mm.exp6 -0.137003610269910 0.0836773533573992 -1.63728422055542 0.101888571717169 df.mm.exp7 -0.187625867897461 0.0836773533573992 -2.24225385207968 0.0251654778956080 * df.mm.exp8 -0.136536219007961 0.0836773533573992 -1.63169858426083 0.103060706888081 df.mm.trans1:exp2 -0.52082673411956 0.0775518521729545 -6.71585164668953 3.14541470252600e-11 *** df.mm.trans2:exp2 -0.109047832401768 0.0537294992738512 -2.02957097824359 0.0426669666059897 * df.mm.trans1:exp3 0.423378070438134 0.0775518521729545 5.45929025001138 6.04260502127712e-08 *** df.mm.trans2:exp3 0.261130945435317 0.0537294992738512 4.86010383428984 1.36330747791782e-06 *** df.mm.trans1:exp4 0.366971305422143 0.0775518521729545 4.73194766004726 2.5466856160429e-06 *** df.mm.trans2:exp4 0.217082970586096 0.0537294992738512 4.04029394503859 5.75130076453821e-05 *** df.mm.trans1:exp5 0.253569666105824 0.0775518521729545 3.26967904699837 0.00111376796506766 ** df.mm.trans2:exp5 0.081842639305671 0.0537294992738512 1.52323472974374 0.128019016883628 df.mm.trans1:exp6 0.294304091347326 0.0775518521729545 3.7949331073483 0.000156639081577845 *** df.mm.trans2:exp6 0.0437287583819735 0.0537294992738512 0.813868712215137 0.41591567395482 df.mm.trans1:exp7 0.260503190368121 0.0775518521729545 3.35908405884559 0.0008118083984609 *** df.mm.trans2:exp7 0.137448704258922 0.0537294992738512 2.55816090074404 0.0106704843482580 * df.mm.trans1:exp8 0.141968736988143 0.0775518521729545 1.83062986905235 0.067455980516154 . df.mm.trans2:exp8 0.185882755525893 0.0537294992738512 3.4596033471013 0.000564009931223728 *** df.mm.trans1:probe2 0.106970046618496 0.0555543002791882 1.92550434585474 0.0544521802868463 . df.mm.trans1:probe3 -0.0262863552817970 0.0555543002791882 -0.473165086225458 0.636199606875162 df.mm.trans1:probe4 0.083099483636496 0.0555543002791882 1.49582450357361 0.135017771674324 df.mm.trans1:probe5 -0.268515260177135 0.0555543002791882 -4.8333838933748 1.55490324734690e-06 *** df.mm.trans1:probe6 -0.16038998652471 0.0555543002791882 -2.88708499105686 0.00397277393226207 ** df.mm.trans1:probe7 -0.317353942898393 0.0555543002791882 -5.71250004596459 1.47137293701847e-08 *** df.mm.trans1:probe8 -0.362183471368044 0.0555543002791882 -6.51944979142733 1.12217339823905e-10 *** df.mm.trans1:probe9 -0.20537412587788 0.0555543002791882 -3.69681779530608 0.000230289433146461 *** df.mm.trans1:probe10 -0.267568264325505 0.0555543002791882 -4.81633758288451 1.69040934165548e-06 *** df.mm.trans1:probe11 0.101880106321127 0.0555543002791882 1.83388335032802 0.0669710517561351 . df.mm.trans1:probe12 -0.136864585163484 0.0555543002791882 -2.46361819833336 0.0139232136133432 * df.mm.trans1:probe13 0.0157450368178973 0.0555543002791882 0.283417066523575 0.776916342465974 df.mm.trans1:probe14 1.18858755339448 0.0555543002791882 21.3950593819242 8.61965277416258e-84 *** df.mm.trans1:probe15 0.526561880800972 0.0555543002791882 9.47832801699841 1.84170905461955e-20 *** df.mm.trans1:probe16 0.552806852284785 0.0555543002791882 9.95074817802858 2.67064030893046e-22 *** df.mm.trans1:probe17 0.536046539691986 0.0555543002791882 9.64905573462511 4.06531567338941e-21 *** df.mm.trans1:probe18 0.94899338159846 0.0555543002791882 17.0822668421579 1.53089939249992e-57 *** df.mm.trans1:probe19 0.763924162445246 0.0555543002791882 13.7509456262818 1.65949884211164e-39 *** df.mm.trans1:probe20 0.0953986599121982 0.0555543002791882 1.71721467884164 0.0862523907915455 . df.mm.trans1:probe21 0.198879639396287 0.0555543002791882 3.57991439720809 0.000360373649498694 *** df.mm.trans1:probe22 0.447398338959194 0.0555543002791882 8.05335206655099 2.29852226271246e-15 *** df.mm.trans1:probe23 0.573627121857503 0.0555543002791882 10.3255214983312 8.26729479411593e-24 *** df.mm.trans1:probe24 0.281087950476061 0.0555543002791882 5.05969743230413 5.0028210033888e-07 *** df.mm.trans1:probe25 0.290658384116133 0.0555543002791882 5.23196913030007 2.04650953056462e-07 *** df.mm.trans2:probe2 0.0107719281724919 0.0555543002791882 0.19389908824983 0.846294634197176 df.mm.trans2:probe3 0.145370037826565 0.0555543002791882 2.61671980559575 0.00901306651082083 ** df.mm.trans2:probe4 -0.222211962879466 0.0555543002791882 -3.99990570959835 6.80800783302159e-05 *** df.mm.trans2:probe5 0.0945376100707091 0.0555543002791882 1.70171543148974 0.0891223835429249 . df.mm.trans2:probe6 -0.0311598407084766 0.0555543002791882 -0.560889806043506 0.574999451471612 df.mm.trans3:probe2 0.0336781142041159 0.0555543002791882 0.606219753194019 0.54450766873661 df.mm.trans3:probe3 -0.0307051322208245 0.0555543002791882 -0.55270486832731 0.580590161310188 df.mm.trans3:probe4 -0.305506491276341 0.0555543002791882 -5.49924109818715 4.85356362889313e-08 *** df.mm.trans3:probe5 -0.54760044676183 0.0555543002791882 -9.85703076107274 6.26711901555069e-22 *** df.mm.trans3:probe6 -0.531187104562141 0.0555543002791882 -9.5615839258646 8.83984052275845e-21 *** df.mm.trans3:probe7 -0.211223432529701 0.0555543002791882 -3.80210769406144 0.000152234283088700 *** df.mm.trans3:probe8 -0.338559134365402 0.0555543002791882 -6.09420211691936 1.57281335580364e-09 *** df.mm.trans3:probe9 0.223116783937548 0.0555543002791882 4.01619285665151 6.3614550251906e-05 *** df.mm.trans3:probe10 0.325815222846727 0.0555543002791882 5.86480652639566 6.12203857021305e-09 *** df.mm.trans3:probe11 -0.0927206271010568 0.0555543002791882 -1.66900899903498 0.0954314488716013 . df.mm.trans3:probe12 -0.0220147202433723 0.0555543002791882 -0.396273918179823 0.691988273233362 df.mm.trans3:probe13 0.058355630190809 0.0555543002791882 1.05042507776253 0.293778803477227 cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.40518142406562 0.196338109992171 22.4367109586686 1.75596333407078e-90 *** df.mm.trans1 0.132169137708908 0.169265348676352 0.780839898670727 0.435083142836851 df.mm.trans2 0.207947380486842 0.147629278240765 1.40857818289747 0.159273590850591 df.mm.exp2 0.0247236786922441 0.187314626835579 0.131990112624499 0.895018904617684 df.mm.exp3 -0.158712548622113 0.187314626835579 -0.84730461952353 0.397029930076109 df.mm.exp4 0.0687475388460693 0.187314626835579 0.367016393794033 0.713685143766283 df.mm.exp5 -0.0329808235627584 0.187314626835579 -0.176071800264206 0.860273507169312 df.mm.exp6 -0.0371844021105936 0.187314626835579 -0.198513072570853 0.84268437408514 df.mm.exp7 -0.242720302038468 0.187314626835579 -1.2957893686088 0.195349781761657 df.mm.exp8 -0.00488129175414317 0.187314626835579 -0.0260593197477732 0.979215270580221 df.mm.trans1:exp2 -0.104621393215422 0.173602482240799 -0.602649177966846 0.546879972671062 df.mm.trans2:exp2 0.0817601629707265 0.120275327824455 0.679775016619015 0.496805681525132 df.mm.trans1:exp3 0.0506176716134505 0.173602482240799 0.291572280304381 0.770674691575801 df.mm.trans2:exp3 0.146812467120121 0.120275327824455 1.22063659917350 0.222513995946237 df.mm.trans1:exp4 -0.0530795666596684 0.173602482240799 -0.305753500609762 0.759856549366418 df.mm.trans2:exp4 -0.101557354555575 0.120275327824455 -0.844373957590044 0.398664256526618 df.mm.trans1:exp5 -0.0741987149924861 0.173602482240799 -0.427405841407078 0.669176603337326 df.mm.trans2:exp5 0.0510812099739812 0.120275327824455 0.424702313416559 0.671145886120335 df.mm.trans1:exp6 -0.0931695088113915 0.173602482240799 -0.53668304513157 0.591607027390576 df.mm.trans2:exp6 0.0719959634597733 0.120275327824455 0.598592951372814 0.549581148262847 df.mm.trans1:exp7 0.203647367567786 0.173602482240799 1.17306714131721 0.241050759553933 df.mm.trans2:exp7 0.0668721167100258 0.120275327824455 0.555991972082814 0.578341847235914 df.mm.trans1:exp8 -0.00435693484840841 0.173602482240799 -0.0250971921148283 0.97998249242843 df.mm.trans2:exp8 0.0323578598267383 0.120275327824455 0.269031566257424 0.787961390847843 df.mm.trans1:probe2 0.134358960231857 0.124360207492003 1.08040154436456 0.280226266057478 df.mm.trans1:probe3 0.188336550927747 0.124360207492003 1.51444384603377 0.130232167890835 df.mm.trans1:probe4 0.220026827828090 0.124360207492003 1.76927034994082 0.0771562830921201 . df.mm.trans1:probe5 0.152558307360670 0.124360207492003 1.22674535880362 0.220209686038187 df.mm.trans1:probe6 0.147940389725153 0.124360207492003 1.18961195633793 0.234483876194970 df.mm.trans1:probe7 -0.0368436622396824 0.124360207492003 -0.296265686449997 0.76708926223433 df.mm.trans1:probe8 0.064572248823335 0.124360207492003 0.51923561503777 0.603712384007064 df.mm.trans1:probe9 0.195283096090826 0.124360207492003 1.57030210892325 0.116664055519494 df.mm.trans1:probe10 0.278327658012055 0.124360207492003 2.23807650071630 0.0254375393911927 * df.mm.trans1:probe11 0.259599295142919 0.124360207492003 2.08747878745387 0.0370998352527167 * df.mm.trans1:probe12 0.205529861913185 0.124360207492003 1.65269796551603 0.0987090986383531 . df.mm.trans1:probe13 0.121042340715711 0.124360207492003 0.973320511092701 0.330631542746997 df.mm.trans1:probe14 0.129648684977532 0.124360207492003 1.04252547975098 0.297422371190798 df.mm.trans1:probe15 -0.0109305295857590 0.124360207492003 -0.0878941086236274 0.929978596369774 df.mm.trans1:probe16 0.0559015198529496 0.124360207492003 0.449512918805191 0.6531599862839 df.mm.trans1:probe17 0.0523326329206636 0.124360207492003 0.420814937318505 0.673981463927658 df.mm.trans1:probe18 0.132781287345037 0.124360207492003 1.06771522839068 0.285909011124302 df.mm.trans1:probe19 0.122316544975761 0.124360207492003 0.983566588079442 0.3255687235523 df.mm.trans1:probe20 0.0529789392993581 0.124360207492003 0.426011988623972 0.670191619224636 df.mm.trans1:probe21 0.0720999548308881 0.124360207492003 0.579767083739582 0.56220347663272 df.mm.trans1:probe22 0.118815315971034 0.124360207492003 0.955412654636123 0.339602053264310 df.mm.trans1:probe23 0.00281728180001006 0.124360207492003 0.0226542063319669 0.981930664996035 df.mm.trans1:probe24 0.220037299796024 0.124360207492003 1.76935455668304 0.0771422293578758 . df.mm.trans1:probe25 0.274014193317120 0.124360207492003 2.20339125226001 0.0277966162785283 * df.mm.trans2:probe2 -0.0804509832824133 0.124360207492003 -0.646919017786188 0.517834163495875 df.mm.trans2:probe3 -0.0644937134022754 0.124360207492003 -0.518604099357285 0.604152625169653 df.mm.trans2:probe4 -0.0323213728706033 0.124360207492003 -0.259901245924519 0.794993935637728 df.mm.trans2:probe5 0.0480943090377052 0.124360207492003 0.386733907956834 0.699036236406266 df.mm.trans2:probe6 -0.118801051241694 0.124360207492003 -0.955297949702543 0.339660011186709 df.mm.trans3:probe2 -0.301455069671364 0.124360207492003 -2.42404765761386 0.0155266692952763 * df.mm.trans3:probe3 -0.238709491345342 0.124360207492003 -1.91950058752267 0.0552078994020888 . df.mm.trans3:probe4 -0.0974467007893959 0.124360207492003 -0.783584257011327 0.433471326871474 df.mm.trans3:probe5 -0.155709259645635 0.124360207492003 -1.25208266201749 0.210835167617081 df.mm.trans3:probe6 -0.153151579312014 0.124360207492003 -1.23151595193231 0.218422111026452 df.mm.trans3:probe7 0.0270392366030666 0.124360207492003 0.217426756905381 0.827920537582735 df.mm.trans3:probe8 -0.246507722398341 0.124360207492003 -1.98220739068960 0.0477319093251161 * df.mm.trans3:probe9 -0.0668581520616065 0.124360207492003 -0.537616922727518 0.590962245492002 df.mm.trans3:probe10 -0.114009524124017 0.124360207492003 -0.916768526068502 0.359486990431381 df.mm.trans3:probe11 -0.211983038418253 0.124360207492003 -1.70458897338109 0.0885845489300969 . df.mm.trans3:probe12 -0.204133748483104 0.124360207492003 -1.64147159770725 0.101016848300843 df.mm.trans3:probe13 -0.208488224858435 0.124360207492003 -1.67648662753993 0.093958310221915 .