fitVsDatCorrelation=0.87537260283272 cont.fitVsDatCorrelation=0.278988230098047 fstatistic=9991.33751426548,53,715 cont.fstatistic=2522.23249397563,53,715 residuals=-0.494969437430216,-0.0828077250457794,-0.000145694002319082,0.0734264701998976,0.80647428533647 cont.residuals=-0.565325150260302,-0.216347091097119,-0.0798347131483106,0.192904769740117,1.24459948084101 predictedValues: Include Exclude Both Lung 55.8538615582688 53.7838095212998 65.613585232125 cerebhem 62.488999461291 76.9013578857555 67.5478100390848 cortex 53.2644159589012 48.154454582795 66.0635624851193 heart 55.582441682128 49.272373717394 64.1782019156445 kidney 55.911241607269 50.0384273512577 66.7458497465682 liver 56.4486564432627 50.0628468742533 66.3207787438189 stomach 56.3282671463524 52.2909903460193 82.2518039678997 testicle 56.0614635634707 54.779372416335 63.8565444501649 diffExp=2.07005203696895,-14.4123584244645,5.10996137610618,6.31006796473402,5.87281425601132,6.38580956900939,4.03727680033307,1.28209114713567 diffExpScore=2.57596094414775 diffExp1.5=0,0,0,0,0,0,0,0 diffExp1.5Score=0 diffExp1.4=0,0,0,0,0,0,0,0 diffExp1.4Score=0 diffExp1.3=0,0,0,0,0,0,0,0 diffExp1.3Score=0 diffExp1.2=0,-1,0,0,0,0,0,0 diffExp1.2Score=0.5 cont.predictedValues: Include Exclude Both Lung 56.5954250239794 61.4329361189732 57.5249403138194 cerebhem 62.5928752051689 56.2626678663306 60.1576518650489 cortex 63.0239235739592 54.9591263517755 56.5528962766995 heart 56.4443959603614 52.1051734510394 54.500171864478 kidney 62.1034590082386 58.7923920759971 63.132969050438 liver 57.8126818929268 55.8018401108927 58.3272876437434 stomach 59.4342550995093 58.0359242334274 55.5853990448898 testicle 55.8763189552942 55.930890567149 53.3451912828318 cont.diffExp=-4.83751109499378,6.33020733883834,8.06479722218366,4.33922250932196,3.31106693224154,2.01084178203416,1.39833086608184,-0.0545716118547972 cont.diffExpScore=1.40738377707078 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.94784533005028 cont.tran.correlation=0.0412752347060279 tran.covariance=0.00639250870549248 cont.tran.covariance=0.000146531453539698 tran.mean=55.4514362572533 cont.tran.mean=57.9502678434389 weightedLogRatios: wLogRatio Lung 0.151210334762196 cerebhem -0.879681969924086 cortex 0.395839224044293 heart 0.47690770570189 kidney 0.440376535262154 liver 0.477004584921443 stomach 0.297044140322123 testicle 0.0928840558989737 cont.weightedLogRatios: wLogRatio Lung -0.334382059326376 cerebhem 0.435366812288937 cortex 0.557975045625092 heart 0.319427941451310 kidney 0.224712927026167 liver 0.143003880741746 stomach 0.0969713981762468 testicle -0.00392775965854873 varWeightedLogRatios=0.205110697889467 cont.varWeightedLogRatios=0.0765996336038597 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 3.53853789318971 0.0790656623783748 44.754420398779 1.63427930208986e-209 *** df.mm.trans1 0.405811445582753 0.070211838372372 5.77981512790638 1.11675363033292e-08 *** df.mm.trans2 0.385354525450076 0.0638667973782892 6.0337223920527 2.57081421529279e-09 *** df.mm.exp2 0.440750040897828 0.0861019336570547 5.11893313166859 3.95369645616355e-07 *** df.mm.exp3 -0.164863589553640 0.0861019336570547 -1.91474897892879 0.0559232833003153 . df.mm.exp4 -0.0703610934523082 0.0861019336570547 -0.817183662013416 0.414095682864888 df.mm.exp5 -0.0882637818248797 0.0861019336570547 -1.0251080094953 0.305658910895641 df.mm.exp6 -0.0718209917335646 0.0861019336570547 -0.834139126533775 0.404481177752753 df.mm.exp7 -0.245693126607237 0.0861019336570547 -2.85351462123762 0.00444886595214682 ** df.mm.exp8 0.0491949034578212 0.0861019336570547 0.571356546459982 0.567937527427966 df.mm.trans1:exp2 -0.328498172989559 0.0817578255011847 -4.0179416584997 6.49293259641319e-05 *** df.mm.trans2:exp2 -0.0831989903408923 0.06884625020443 -1.20847526326915 0.227264018872893 df.mm.trans1:exp3 0.117393415014003 0.0817578255011847 1.43586762850367 0.1514773508541 df.mm.trans2:exp3 0.0543047546074164 0.0688462502044301 0.788783041141172 0.430500279587811 df.mm.trans1:exp4 0.0654897830270104 0.0817578255011847 0.801021585708165 0.423385245113422 df.mm.trans2:exp4 -0.0172478370203331 0.06884625020443 -0.250526890994323 0.80225188240939 df.mm.trans1:exp5 0.0892905791420466 0.0817578255011847 1.09213495582454 0.275141642347265 df.mm.trans2:exp5 0.0160825554862154 0.06884625020443 0.233601037652165 0.815361586543786 df.mm.trans1:exp6 0.0824138164946424 0.0817578255011847 1.00802358660393 0.31378414414499 df.mm.trans2:exp6 0.000127661751243971 0.0688462502044301 0.00185430217135858 0.99852099900648 df.mm.trans1:exp7 0.254150951781369 0.0817578255011847 3.10858257571547 0.001954412667916 ** df.mm.trans2:exp7 0.217544730508664 0.0688462502044301 3.15986317138105 0.00164495944671651 ** df.mm.trans1:exp8 -0.0454849156952759 0.0817578255011847 -0.556337150804199 0.578154460228621 df.mm.trans2:exp8 -0.0308536797372876 0.06884625020443 -0.448153380113973 0.654178269602848 df.mm.trans1:probe2 0.0741285239931685 0.0447806052795700 1.65537119318456 0.0982880397680667 . df.mm.trans1:probe3 -0.154612854349382 0.0447806052795699 -3.45267450906745 0.000587736829092587 *** df.mm.trans1:probe4 0.277545864569877 0.0447806052795700 6.19790337439902 9.66383198735883e-10 *** df.mm.trans1:probe5 -0.0284082016013519 0.0447806052795699 -0.634386280042365 0.526031677263055 df.mm.trans1:probe6 -0.026124698859087 0.04478060527957 -0.583393160855862 0.559812630042972 df.mm.trans1:probe7 0.125589231299303 0.04478060527957 2.80454519351036 0.005175525398547 ** df.mm.trans1:probe8 -0.122419354625158 0.0447806052795700 -2.73375837286882 0.00641647842294117 ** df.mm.trans1:probe9 0.0245619674702081 0.0447806052795699 0.548495656029329 0.583522828214793 df.mm.trans1:probe10 -0.00381015364141590 0.0447806052795699 -0.08508490712952 0.932217707461186 df.mm.trans1:probe11 0.673537229782913 0.0447806052795700 15.0408246064998 1.26207510153829e-44 *** df.mm.trans1:probe12 0.333796169085287 0.0447806052795700 7.45403433029462 2.62267950029221e-13 *** df.mm.trans1:probe13 0.397360156249919 0.0447806052795700 8.87348783628891 5.63261388298134e-18 *** df.mm.trans1:probe14 0.566726199444746 0.0447806052795700 12.6556172232737 2.87112528087492e-33 *** df.mm.trans1:probe15 0.473124338697065 0.04478060527957 10.5653850755992 2.40864418188388e-24 *** df.mm.trans1:probe16 0.550400744016423 0.0447806052795699 12.2910519091963 1.23090176494910e-31 *** df.mm.trans1:probe17 -0.185098257913843 0.0447806052795700 -4.13344698577109 3.99731060302321e-05 *** df.mm.trans1:probe18 -0.22370134886099 0.0447806052795700 -4.99549631954279 7.38381341677228e-07 *** df.mm.trans1:probe19 -0.165616123353532 0.04478060527957 -3.69838956663433 0.000233601873245270 *** df.mm.trans1:probe20 -0.170916152292388 0.0447806052795699 -3.81674502221087 0.000146936564041555 *** df.mm.trans1:probe21 -0.217847112165450 0.0447806052795700 -4.86476479729133 1.41037000117274e-06 *** df.mm.trans1:probe22 -0.160093692221836 0.0447806052795700 -3.57506762631623 0.000373687374135337 *** df.mm.trans2:probe2 0.0849352907763407 0.04478060527957 1.89669814077056 0.0582705663818453 . df.mm.trans2:probe3 -0.0043382928667959 0.0447806052795700 -0.0968788349266718 0.922849765487534 df.mm.trans2:probe4 0.159925111791094 0.04478060527957 3.57130304051642 0.000379004380673868 *** df.mm.trans2:probe5 0.128035400531076 0.04478060527957 2.85917083370664 0.00437119690195967 ** df.mm.trans2:probe6 0.242243139479701 0.04478060527957 5.40955482775081 8.62532743231608e-08 *** df.mm.trans3:probe2 0.217620210126963 0.04478060527957 4.85969782606415 1.44576050977628e-06 *** df.mm.trans3:probe3 -0.405739618519576 0.04478060527957 -9.060610413515 1.22385164821825e-18 *** df.mm.trans3:probe4 -0.395564982647198 0.04478060527957 -8.83339964204692 7.78656231518509e-18 *** cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.18055191924547 0.157051402349751 26.6190040757195 5.09158342376988e-109 *** df.mm.trans1 -0.0691843911194915 0.139464684747282 -0.496071039380742 0.61999674386003 df.mm.trans2 -0.107440699242942 0.126861266827142 -0.846914916822787 0.397325924725446 df.mm.exp2 -0.0319416319580773 0.171027839634771 -0.186762763455870 0.851899622439322 df.mm.exp3 0.0132720639973438 0.171027839634771 0.0776017753933288 0.938166540548169 df.mm.exp4 -0.113339265388395 0.171027839634771 -0.662694831615898 0.507739582555111 df.mm.exp5 -0.0440846377694546 0.171027839634771 -0.257762934172572 0.796664041540618 df.mm.exp6 -0.088710696059836 0.171027839634771 -0.518691554832694 0.604136339492748 df.mm.exp7 0.0263567239728385 0.171027839634771 0.154107799228027 0.877568225687072 df.mm.exp8 -0.0311820125249798 0.171027839634771 -0.182321267646067 0.855382288567048 df.mm.trans1:exp2 0.13266493699565 0.162398957547204 0.816907565167644 0.414253355039792 df.mm.trans2:exp2 -0.0559732560077352 0.136752160367467 -0.409304363874978 0.682438894248616 df.mm.trans1:exp3 0.0943141776034828 0.162398957547204 0.580756053043437 0.561587876784988 df.mm.trans2:exp3 -0.124628422491254 0.136752160367467 -0.91134518208973 0.36242067320502 df.mm.trans1:exp4 0.110667124683123 0.162398957547204 0.681452186359974 0.49580606494999 df.mm.trans2:exp4 -0.0513426025053152 0.136752160367467 -0.375442715986002 0.707442592420311 df.mm.trans1:exp5 0.136958173796234 0.162398957547204 0.843343922059504 0.399318165877914 df.mm.trans2:exp5 0.000150987632545067 0.136752160367467 0.00110409687232251 0.999119366287339 df.mm.trans1:exp6 0.109990705606371 0.162398957547204 0.677287017525345 0.498442943077599 df.mm.trans2:exp6 -0.00742856840661297 0.136752160367467 -0.0543213970927525 0.956694276568523 df.mm.trans1:exp7 0.0225858693764971 0.162398957547204 0.139076443085739 0.889428905496218 df.mm.trans2:exp7 -0.0832406320378587 0.136752160367467 -0.608697016662716 0.542918614179494 df.mm.trans1:exp8 0.018394518666795 0.162398957547204 0.113267467627976 0.909850302864576 df.mm.trans2:exp8 -0.0626472660875843 0.136752160367467 -0.458108054156107 0.647014005425085 df.mm.trans1:probe2 -0.0597173080191201 0.0889495723639274 -0.671361384119906 0.50220717413778 df.mm.trans1:probe3 -0.137127802815684 0.0889495723639274 -1.5416353240535 0.123604675590164 df.mm.trans1:probe4 -0.147336082635223 0.0889495723639274 -1.65640012334645 0.0980795555010136 . df.mm.trans1:probe5 -0.185556816386068 0.0889495723639274 -2.08609003342796 0.037324345522058 * df.mm.trans1:probe6 -0.0548776050521345 0.0889495723639274 -0.61695187052287 0.537462873212038 df.mm.trans1:probe7 -0.0451844067267232 0.0889495723639274 -0.507977784781878 0.61162559280949 df.mm.trans1:probe8 0.00763244699932991 0.0889495723639274 0.0858064496150986 0.931644301087896 df.mm.trans1:probe9 -0.0908673411485783 0.0889495723639274 -1.02156017992762 0.30733462600748 df.mm.trans1:probe10 -0.118076366420054 0.0889495723639274 -1.32745288461824 0.184782596125116 df.mm.trans1:probe11 0.0113249660711519 0.0889495723639274 0.127318949042464 0.898723760768814 df.mm.trans1:probe12 -0.093571716416192 0.0889495723639274 -1.05196364557385 0.293171618895139 df.mm.trans1:probe13 0.0408027628589513 0.0889495723639274 0.45871792044161 0.646576146842823 df.mm.trans1:probe14 -0.212452876467795 0.0889495723639274 -2.3884642817457 0.0171774294158675 * df.mm.trans1:probe15 -0.0731460626348311 0.0889495723639274 -0.822331807684943 0.411162224844328 df.mm.trans1:probe16 -0.0933064055839158 0.0889495723639274 -1.04898093497474 0.294541329878134 df.mm.trans1:probe17 -0.132302790079471 0.0889495723639274 -1.48739096280495 0.137352434407995 df.mm.trans1:probe18 -0.105466250111450 0.0889495723639274 -1.18568585894878 0.236140268689251 df.mm.trans1:probe19 -0.120787434375011 0.0889495723639274 -1.35793159163062 0.174913753110846 df.mm.trans1:probe20 -0.0212968897727643 0.0889495723639274 -0.239426556044928 0.81084345632329 df.mm.trans1:probe21 -0.216118339711269 0.0889495723639274 -2.42967261075798 0.0153576752141743 * df.mm.trans1:probe22 -0.113991461441709 0.0889495723639274 -1.28152905530928 0.200423334913306 df.mm.trans2:probe2 0.0818021921666902 0.0889495723639274 0.919646829014595 0.358067497379842 df.mm.trans2:probe3 0.163343133847366 0.0889495723639274 1.83635659516232 0.0667199419729545 . df.mm.trans2:probe4 -0.0740948694697564 0.0889495723639274 -0.832998602473381 0.405123677632700 df.mm.trans2:probe5 0.0750587757107266 0.0889495723639274 0.843835149691691 0.399043755552451 df.mm.trans2:probe6 0.202239669796726 0.0889495723639274 2.27364409318669 0.0232830732299889 * df.mm.trans3:probe2 0.129592458310210 0.0889495723639274 1.45692053223141 0.145577327821893 df.mm.trans3:probe3 0.0529961507371641 0.0889495723639274 0.595799949665144 0.551497424930446 df.mm.trans3:probe4 0.0105784688263701 0.0889495723639274 0.118926584414475 0.905366924360548