fitVsDatCorrelation=0.910025280656074 cont.fitVsDatCorrelation=0.26799512362693 fstatistic=7342.04152272882,54,738 cont.fstatistic=1348.25632143756,54,738 residuals=-0.823789930648692,-0.0964951714252823,-0.0100515112397599,0.094034310299806,0.836023577485958 cont.residuals=-0.789649304833052,-0.309646977114144,-0.0947182828483955,0.193570244805508,1.74308869462819 predictedValues: Include Exclude Both Lung 71.6050344593822 66.8330589851983 70.5279551730379 cerebhem 70.6246797563747 91.5353177714515 74.2460373751603 cortex 66.699081537814 59.4155462325929 66.6620102350471 heart 69.3993941234574 59.85833702333 63.0119009351205 kidney 60.0283358170865 63.3045783536295 59.0370661551492 liver 62.378766462305 62.390477051083 60.589494762894 stomach 104.218653821084 69.0736303736863 87.1785228736035 testicle 84.094209436561 67.2885517131323 84.7347958906783 diffExp=4.77197547418382,-20.9106380150768,7.28353530522105,9.54105710012745,-3.27624253654301,-0.0117105887780582,35.145023447398,16.8056577234287 diffExpScore=1.94137925911663 diffExp1.5=0,0,0,0,0,0,1,0 diffExp1.5Score=0.5 diffExp1.4=0,0,0,0,0,0,1,0 diffExp1.4Score=0.5 diffExp1.3=0,0,0,0,0,0,1,0 diffExp1.3Score=0.5 diffExp1.2=0,-1,0,0,0,0,1,1 diffExp1.2Score=1.5 cont.predictedValues: Include Exclude Both Lung 68.2037834676581 68.6595258423766 60.9916060049129 cerebhem 70.6556911500208 68.6310495221536 81.6314500492834 cortex 68.6582542794945 65.6428795650599 75.3043431997865 heart 73.1754874988207 70.7874936975876 93.7706267976736 kidney 77.3089584591813 81.1024095266852 71.241461371166 liver 76.943901141671 68.5701062071735 68.4117635359007 stomach 82.3497252563163 76.2149468342062 80.178347517611 testicle 69.6323919612789 59.1308550053305 68.3879144895772 cont.diffExp=-0.455742374718483,2.02464162786721,3.01537471443457,2.38799380123301,-3.79345106750395,8.37379493449747,6.13477842211006,10.5015369559484 cont.diffExpScore=1.25689148768237 cont.diffExp1.5=0,0,0,0,0,0,0,0 cont.diffExp1.5Score=0 cont.diffExp1.4=0,0,0,0,0,0,0,0 cont.diffExp1.4Score=0 cont.diffExp1.3=0,0,0,0,0,0,0,0 cont.diffExp1.3Score=0 cont.diffExp1.2=0,0,0,0,0,0,0,0 cont.diffExp1.2Score=0 tran.correlation=0.171701261265276 cont.tran.correlation=0.710186374360438 tran.covariance=0.0057055373303875 cont.tran.covariance=0.00452148638622584 tran.mean=70.5467283073855 cont.tran.mean=71.6042162134384 weightedLogRatios: wLogRatio Lung 0.292193475407905 cerebhem -1.13776107704778 cortex 0.479004481865465 heart 0.616130199164142 kidney -0.219014389235080 liver -0.000775889882295959 stomach 1.82659457310402 testicle 0.963237048930738 cont.weightedLogRatios: wLogRatio Lung -0.0281433630313834 cerebhem 0.123367524961358 cortex 0.188931606170219 heart 0.141878784160371 kidney -0.209419737418646 liver 0.493771163741326 stomach 0.338490036547279 testicle 0.680308087835504 varWeightedLogRatios=0.75820090088785 cont.varWeightedLogRatios=0.0804482594768606 coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.06152647591043 0.095156568099371 42.6825657653923 1.68291329446416e-201 *** df.mm.trans1 0.0577196767520238 0.0838244637556052 0.688577942118528 0.491305300873861 df.mm.trans2 0.187310316653838 0.0756373734008024 2.47642545255082 0.0134936637802672 * df.mm.exp2 0.249366052055931 0.100726467447002 2.47567554364135 0.0135217965437683 * df.mm.exp3 -0.132242212758720 0.100726467447002 -1.31288444944522 0.189629982556257 df.mm.exp4 -0.0288188338646885 0.100726467447003 -0.286109843769232 0.774874284512 df.mm.exp5 -0.0527451975930338 0.100726467447003 -0.523647844800929 0.600680702478453 df.mm.exp6 -0.0548380153025724 0.100726467447002 -0.544425082031449 0.58631344320654 df.mm.exp7 0.196352092159670 0.100726467447002 1.94935945969694 0.0516309619458471 . df.mm.exp8 -0.0159525852272079 0.100726467447002 -0.158375307221028 0.874204396167159 df.mm.trans1:exp2 -0.26315178219585 0.0950094565946015 -2.76974305114384 0.00575099884930798 ** df.mm.trans2:exp2 0.0651609792146682 0.0777350099410375 0.83824494605575 0.402164550749527 df.mm.trans1:exp3 0.0612680103644922 0.0950094565946015 0.644862233302927 0.519216869748926 df.mm.trans2:exp3 0.0146002728612898 0.0777350099410375 0.187821071514164 0.851068545447465 df.mm.trans1:exp4 -0.00246841404343863 0.0950094565946015 -0.0259807195190177 0.979279740258376 df.mm.trans2:exp4 -0.0813982983075244 0.0777350099410375 -1.04712533476571 0.295384594406183 df.mm.trans1:exp5 -0.123603473221353 0.0950094565946015 -1.30095969024178 0.193678291246513 df.mm.trans2:exp5 -0.00149500112138664 0.0777350099410375 -0.019232018141126 0.984661213765462 df.mm.trans1:exp6 -0.0831024334568161 0.0950094565946014 -0.874675389539467 0.382035109565379 df.mm.trans2:exp6 -0.0139471854396564 0.0777350099410375 -0.179419613507935 0.8576574798697 df.mm.trans1:exp7 0.178973655360509 0.0950094565946014 1.88374570043250 0.0599922997492148 . df.mm.trans2:exp7 -0.163376902761664 0.0777350099410375 -2.10171585345633 0.0359165698125895 * df.mm.trans1:exp8 0.176724911351573 0.0950094565946014 1.86007706691393 0.0632722573262538 . df.mm.trans2:exp8 0.0227448460229636 0.0777350099410375 0.292594624226789 0.769914265635809 df.mm.trans1:probe2 -0.239865970909535 0.0554735712331929 -4.32396843356661 1.74300453853178e-05 *** df.mm.trans1:probe3 -0.23405633562682 0.0554735712331929 -4.21924044952727 2.75646790573311e-05 *** df.mm.trans1:probe4 0.179663883175959 0.0554735712331929 3.23872934772327 0.00125438163823325 ** df.mm.trans1:probe5 0.186234221785215 0.0554735712331929 3.35717022800545 0.000827804864576462 *** df.mm.trans1:probe6 0.175901091073875 0.0554735712331929 3.17089899142141 0.00158252474561964 ** df.mm.trans1:probe7 -0.202535022764419 0.055473571233193 -3.65101828243629 0.00027964361080529 *** df.mm.trans1:probe8 0.122357500722587 0.0554735712331929 2.20568998899017 0.0277132093830474 * df.mm.trans1:probe9 -0.22076781390988 0.0554735712331929 -3.97969355500556 7.58181594246956e-05 *** df.mm.trans1:probe10 0.259164230273314 0.0554735712331929 4.67185047784055 3.54728824458960e-06 *** df.mm.trans1:probe11 -0.195888413177757 0.0554735712331929 -3.53120249558669 0.000439369691107957 *** df.mm.trans1:probe12 -0.0340754815630175 0.0554735712331929 -0.614265150151866 0.53922943988808 df.mm.trans1:probe13 -0.191364041907518 0.0554735712331929 -3.44964345459363 0.000593220387325016 *** df.mm.trans1:probe14 -0.131737009522830 0.055473571233193 -2.37477066275488 0.0178145506257495 * df.mm.trans1:probe15 -0.267485460862968 0.0554735712331929 -4.82185399130959 1.72788488982532e-06 *** df.mm.trans1:probe16 -0.2214423328836 0.0554735712331929 -3.99185284020616 7.211105965009e-05 *** df.mm.trans1:probe17 0.974432242919721 0.055473571233193 17.5657023922892 5.65398078353245e-58 *** df.mm.trans1:probe18 0.66834670332806 0.0554735712331929 12.0480201377075 1.20820579164810e-30 *** df.mm.trans1:probe19 1.10809146843929 0.0554735712331929 19.9751240781170 2.69449295013484e-71 *** df.mm.trans1:probe20 0.79964707324016 0.0554735712331929 14.4149196719047 1.09484299779682e-41 *** df.mm.trans1:probe21 0.661463508579355 0.0554735712331929 11.9239395242606 4.23146504475091e-30 *** df.mm.trans1:probe22 0.90573523738175 0.0554735712331929 16.3273288026533 2.16009814145515e-51 *** df.mm.trans2:probe2 -0.0448698617207871 0.055473571233193 -0.808851147011406 0.418861447180893 df.mm.trans2:probe3 0.0670632307870753 0.055473571233193 1.20892218215343 0.227079914474235 df.mm.trans2:probe4 -0.322822609568840 0.0554735712331929 -5.81939475668148 8.80359214126584e-09 *** df.mm.trans2:probe5 -0.199125660925470 0.055473571233193 -3.58955907288555 0.000353145382169068 *** df.mm.trans2:probe6 -0.0132734325638349 0.055473571233193 -0.239274888361482 0.810958870118114 df.mm.trans3:probe2 0.0815539313450296 0.055473571233193 1.47014027638861 0.141949953726231 df.mm.trans3:probe3 -0.304545970680565 0.0554735712331929 -5.48992905829612 5.53367493375533e-08 *** df.mm.trans3:probe4 0.0156990353534757 0.055473571233193 0.283000264891583 0.777255993773302 df.mm.trans3:probe5 -0.0454435501034369 0.055473571233193 -0.819192799259434 0.412940881040059 cont.coeff: Name Estimate Std-Error t-value Pr(>|t|) Signif df.mm.(Intercept) 4.41441454766114 0.221143786348408 19.9617390140291 3.20645577371281e-71 *** df.mm.trans1 -0.109818920188033 0.194807985132263 -0.563729048957992 0.573109796917499 df.mm.trans2 -0.225159377825900 0.175781193851320 -1.28090709189486 0.200628675323662 df.mm.exp2 -0.256574568962512 0.234088227871651 -1.09605925635522 0.273410381349776 df.mm.exp3 -0.24909098859112 0.234088227871651 -1.06409019734087 0.287635875418764 df.mm.exp4 -0.329232496042272 0.234088227871651 -1.40644618926667 0.160012600225085 df.mm.exp5 0.136523867381851 0.234088227871651 0.58321543386926 0.55992645632657 df.mm.exp6 0.00446480527190085 0.234088227871651 0.0190731730189733 0.984787887642948 df.mm.exp7 0.0193555458435002 0.234088227871651 0.0826848322082762 0.934124566457728 df.mm.exp8 -0.243137063243089 0.234088227871651 -1.03865566181483 0.299305080934324 df.mm.trans1:exp2 0.291893189613115 0.220801899331779 1.32196865378641 0.186588188386873 df.mm.trans2:exp2 0.256159736108097 0.180656099453274 1.41794125348285 0.156630005414580 df.mm.trans1:exp3 0.255732311338725 0.220801899331779 1.15819796891538 0.247157921316139 df.mm.trans2:exp3 0.204160240783086 0.180656099453274 1.13010433304463 0.258799417834645 df.mm.trans1:exp4 0.399592951317246 0.220801899331779 1.80973511788870 0.0707435636444349 . df.mm.trans2:exp4 0.35975495632223 0.180656099453274 1.99138007192101 0.0468073298941316 * df.mm.trans1:exp5 -0.0112140657814139 0.220801899331779 -0.0507879045214352 0.959508271831091 df.mm.trans2:exp5 0.0300289217343665 0.180656099453274 0.166221466229173 0.868028194204555 df.mm.trans1:exp6 0.116111755077726 0.220801899331779 0.52586393246217 0.599140724907299 df.mm.trans2:exp6 -0.00576801721706454 0.180656099453274 -0.0319281620411406 0.974537972690348 df.mm.trans1:exp7 0.169119535106083 0.220801899331779 0.765933334893837 0.443960868879292 df.mm.trans2:exp7 0.0850421681664318 0.180656099453274 0.470740641604673 0.637965057251696 df.mm.trans1:exp8 0.263866884684131 0.220801899331779 1.19503901679596 0.232455675115049 df.mm.trans2:exp8 0.0937300505994621 0.180656099453274 0.518831364582324 0.604033879310704 df.mm.trans1:probe2 0.201061798862137 0.128920534123987 1.55957931937181 0.119288027609921 df.mm.trans1:probe3 -0.153657158266129 0.128920534123987 -1.19187497407009 0.233693397763007 df.mm.trans1:probe4 -0.131402018908655 0.128920534123987 -1.01924817331491 0.30841916939254 df.mm.trans1:probe5 -0.0354942230871775 0.128920534123987 -0.275318616451291 0.783148527355225 df.mm.trans1:probe6 -0.136835029228653 0.128920534123987 -1.06139049266624 0.288859687771719 df.mm.trans1:probe7 -0.064679390913516 0.128920534123987 -0.501699681536472 0.61602841931518 df.mm.trans1:probe8 -0.202250476788504 0.128920534123987 -1.56879955674085 0.117123288187091 df.mm.trans1:probe9 -0.151894612689137 0.128920534123987 -1.17820340817899 0.239095288331149 df.mm.trans1:probe10 -0.172640419339678 0.128920534123987 -1.33912274342305 0.18094300849956 df.mm.trans1:probe11 -0.141491141608936 0.128920534123987 -1.09750663515604 0.272777939485945 df.mm.trans1:probe12 -0.170969946255273 0.128920534123987 -1.32616535772995 0.185195206995461 df.mm.trans1:probe13 0.0735894197581296 0.128920534123987 0.570812246925353 0.568300681912091 df.mm.trans1:probe14 -0.102745003308519 0.128920534123987 -0.796963835176993 0.425728350982028 df.mm.trans1:probe15 -0.167579843076828 0.128920534123987 -1.29986928936907 0.194051618186793 df.mm.trans1:probe16 -0.192664388936905 0.128920534123987 -1.49444299347701 0.135487306509779 df.mm.trans1:probe17 -0.0713110979652124 0.128920534123987 -0.553139951286816 0.580335097131816 df.mm.trans1:probe18 -0.169791430907500 0.128920534123987 -1.31702394859927 0.188239384287908 df.mm.trans1:probe19 -0.118193282597036 0.128920534123987 -0.916791753929331 0.35955126286107 df.mm.trans1:probe20 -0.240776896179466 0.128920534123987 -1.86763805948790 0.0622086959621331 . df.mm.trans1:probe21 -0.0281313552232879 0.128920534123987 -0.218206939758977 0.827328200544474 df.mm.trans1:probe22 -0.0387243819604485 0.128920534123987 -0.300374042223608 0.76397645369135 df.mm.trans2:probe2 0.0492352075351963 0.128920534123987 0.381903533597257 0.702642858063714 df.mm.trans2:probe3 0.0635006984827237 0.128920534123987 0.492556898823062 0.622472210589797 df.mm.trans2:probe4 0.00929365292937865 0.128920534123987 0.0720882285551242 0.942551225655115 df.mm.trans2:probe5 0.184960394255112 0.128920534123987 1.43468529285824 0.151800410661344 df.mm.trans2:probe6 0.131961882008287 0.128920534123987 1.02359087250892 0.306363957132950 df.mm.trans3:probe2 -0.0164344737356192 0.128920534123987 -0.127477549230549 0.89859716733303 df.mm.trans3:probe3 -0.0277201662280088 0.128920534123987 -0.215017463403848 0.829813106404674 df.mm.trans3:probe4 0.107765177002138 0.128920534123987 0.835903897966298 0.403479520256028 df.mm.trans3:probe5 0.092889455864633 0.128920534123987 0.720517150319113 0.471434795033577