Brain: Constituive +----------+----------------+----------------+----------------+-----------------+----------------+----------------+ | Position | Nova-1 | Fox-1 | PTB/nPTB | hnRNP-H/F | CTAAC | TGYTTTC | +----------+----------------+----------------+----------------+-----------------+----------------+----------------+ | UpStream | 25422 (0.5213) | 9639 (0.1977) | 12969 (0.2659) | 43122 (0.8842) | 6928 (0.1421) | 5225 (0.1071) | | DnStream | 23100 (0.4737) | 11348 (0.2327) | 9990 (0.2049) | 54862 (1.1250) | 5560 (0.1140) | 3701 (0.0759) | | Inside | 17208 (0.0025) | 6699 (0.0010) | 2551 (0.0004) | 21333 (0.0031) | 2410 (0.0003) | 1034 (0.0002) | +----------+----------------+----------------+----------------+-----------------+----------------+----------------+ Cassette binding sites in 91 include exons: +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ | Position | Nova-1 | Fox-1 | PTB/nPTB | hnRNP-H/F | CTAAC | TGYTTTC | +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ | UpStream | 36 (0.3956) | 18 (0.1978) | 22 (0.2418) | 53 (0.5824) | 23 (0.2527) | 21 (0.2308) | | DnStream | 82 (0.9011) | 33 (0.3626) | 9 (0.0989) | 100 (1.0989) | 18 (0.1978) | 4 (0.0440) | | Inside | 15 (0.0015) | 12 (0.0012) | 5 (0.0005) | 35 (0.0035) | 6 (0.0006) | 0 (0.0000) | +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ Cassette binding sites in 80 skip exons: +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ | Position | Nova-1 | Fox-1 | PTB/nPTB | hnRNP-H/F | CTAAC | TGYTTTC | +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ | UpStream | 46 (0.5750) | 16 (0.2000) | 12 (0.1500) | 61 (0.7625) | 9 (0.1125) | 6 (0.0750) | | DnStream | 33 (0.4125) | 24 (0.3000) | 14 (0.1750) | 76 (0.9500) | 14 (0.1750) | 6 (0.0750) | | Inside | 20 (0.0024) | 7 (0.0009) | 4 (0.0005) | 22 (0.0027) | 2 (0.0002) | 3 (0.0004) | +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ Muscle: Constitutive exons +----------+----------------+----------------+----------------+-----------------+----------------+----------------+ | Position | Nova-1 | Fox-1 | PTB/nPTB | hnRNP-H/F | CTAAC | TGYTTTC | +----------+----------------+----------------+----------------+-----------------+----------------+----------------+ | UpStream | 25422 (0.5213) | 9639 (0.1977) | 12969 (0.2659) | 43122 (0.8842) | 6928 (0.1421) | 5225 (0.1071) | | DnStream | 23100 (0.4737) | 11348 (0.2327) | 9990 (0.2049) | 54862 (1.1250) | 5560 (0.1140) | 3701 (0.0759) | | Inside | 17208 (0.0025) | 6699 (0.0010) | 2551 (0.0004) | 21333 (0.0031) | 2410 (0.0003) | 1034 (0.0002) | +----------+----------------+----------------+----------------+-----------------+----------------+----------------+ Cassette binding sites in 17 include exons: +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ | Position | Nova-1 | Fox-1 | PTB/nPTB | hnRNP-H/F | CTAAC | TGYTTTC | +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ | UpStream | 11 (0.6471) | 3 (0.1765) | 7 (0.4118) | 15 (0.8824) | 0 (0.0000) | 1 (0.0588) | | DnStream | 6 (0.3529) | 14 (0.8235) | 3 (0.1765) | 11 (0.6471) | 8 (0.4706) | 1 (0.0588) | | Inside | 10 (0.0026) | 0 (0.0000) | 3 (0.0008) | 4 (0.0010) | 1 (0.0003) | 2 (0.0005) | +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ Cassette binding sites in 11 skip exons: +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ | Position | Nova-1 | Fox-1 | PTB/nPTB | hnRNP-H/F | CTAAC | TGYTTTC | +----------+--------------+----------------+----------------+-----------------+----------------+----------------+ | UpStream | 7 (0.6364) | 4 (0.3636) | 2 (0.1818) | 10 (0.9091) | 4 (0.3636) | 1 (0.0909) | | DnStream | 8 (0.7273) | 1 (0.0909) | 2 (0.1818) | 19 (1.7273) | 1 (0.0909) | 2 (0.1818) | | Inside | 2 (0.0017) | 0 (0.0000) | 0 (0.0000) | 4 (0.0035) | 0 (0.0000) | 0 (0.0000) | +----------+--------------+----------------+----------------+-----------------+----------------+----------------+